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Items: 1 to 50 of 67

1.

Occurrence of sul and tet(M) genes in bacterial community in Japanese marine aquaculture environment throughout the year: Profile comparison with Taiwanese and Finnish aquaculture waters.

Suzuki S, Nakanishi S, Tamminen M, Yokokawa T, Sato-Takabe Y, Ohta K, Chou HY, Muziasari WI, Virta M.

Sci Total Environ. 2019 Jun 15;669:649-656. doi: 10.1016/j.scitotenv.2019.03.111. Epub 2019 Mar 13.

PMID:
30889452
2.

Proteome evolution under non-substitutable resource limitation.

Tamminen M, Betz A, Pereira AL, Thali M, Matthews B, Suter MJ, Narwani A.

Nat Commun. 2018 Nov 7;9(1):4650. doi: 10.1038/s41467-018-07106-z.

3.

Ecology determines how low antibiotic concentration impacts community composition and horizontal transfer of resistance genes.

Cairns J, Ruokolainen L, Hultman J, Tamminen M, Virta M, Hiltunen T.

Commun Biol. 2018 Apr 19;1:35. doi: 10.1038/s42003-018-0041-7. eCollection 2018.

4.

Construction and Characterization of Synthetic Bacterial Community for Experimental Ecology and Evolution.

Cairns J, Jokela R, Hultman J, Tamminen M, Virta M, Hiltunen T.

Front Genet. 2018 Aug 14;9:312. doi: 10.3389/fgene.2018.00312. eCollection 2018.

5.

Archaea are prominent members of the prokaryotic communities colonizing common forest mushrooms.

Rinta-Kanto JM, Pehkonen K, Sinkko H, Tamminen MV, Timonen S.

Can J Microbiol. 2018 Oct;64(10):716-726. doi: 10.1139/cjm-2018-0035. Epub 2018 May 7.

PMID:
29733685
6.

Host range of antibiotic resistance genes in wastewater treatment plant influent and effluent.

Hultman J, Tamminen M, Pärnänen K, Cairns J, Karkman A, Virta M.

FEMS Microbiol Ecol. 2018 Apr 1;94(4). doi: 10.1093/femsec/fiy038.

7.

A nationwide study on parathyroid carcinoma.

Ryhänen EM, Leijon H, Metso S, Eloranta E, Korsoff P, Ahtiainen P, Kekäläinen P, Tamminen M, Ristamäki R, Knutar O, Löyttyniemi E, Niskanen L, Väisänen M, Heiskanen I, Välimäki MJ, Laakso M, Haglund C, Arola J, Schalin-Jäntti C.

Acta Oncol. 2017 Jul;56(7):991-1003. doi: 10.1080/0284186X.2017.1306103. Epub 2017 Mar 31.

PMID:
28362521
8.

Corrigendum: Mobile genes in the human microbiome are structured from global to individual scales.

Brito IL, Yilmaz S, Huang K, Xu L, Jupiter SD, Jenkins AP, Naisilisili W, Tamminen M, Smillie CS, Wortman JR, Birren BW, Xavier RJ, Blainey PC, Singh AK, Gevers D, Alm EJ.

Nature. 2017 Apr 6;544(7648):124. doi: 10.1038/nature20774. Epub 2017 Mar 22. No abstract available.

PMID:
28329759
9.

Biliary Anomalies in Patients With HNF1B Diabetes.

Kettunen JLT, Parviainen H, Miettinen PJ, Färkkilä M, Tamminen M, Salonen P, Lantto E, Tuomi T.

J Clin Endocrinol Metab. 2017 Jun 1;102(6):2075-2082. doi: 10.1210/jc.2017-00061.

PMID:
28324003
10.

Single-cell mass spectrometry reveals the importance of genetic diversity and plasticity for phenotypic variation in nitrogen-limited Chlamydomonas.

Krismer J, Tamminen M, Fontana S, Zenobi R, Narwani A.

ISME J. 2017 Apr;11(4):988-998. doi: 10.1038/ismej.2016.167. Epub 2016 Dec 9.

11.

Evaluating the mobility potential of antibiotic resistance genes in environmental resistomes without metagenomics.

Pärnänen K, Karkman A, Tamminen M, Lyra C, Hultman J, Paulin L, Virta M.

Sci Rep. 2016 Oct 21;6:35790. doi: 10.1038/srep35790.

12.

Mobile genes in the human microbiome are structured from global to individual scales.

Brito IL, Yilmaz S, Huang K, Xu L, Jupiter SD, Jenkins AP, Naisilisili W, Tamminen M, Smillie CS, Wortman JR, Birren BW, Xavier RJ, Blainey PC, Singh AK, Gevers D, Alm EJ.

Nature. 2016 Jul 21;535(7612):435-439. doi: 10.1038/nature18927. Epub 2016 Jul 13. Erratum in: Nature. 2017 Apr 6;544(7648):124.

13.

"Every Gene Is Everywhere but the Environment Selects": Global Geolocalization of Gene Sharing in Environmental Samples through Network Analysis.

Fondi M, Karkman A, Tamminen MV, Bosi E, Virta M, Fani R, Alm E, McInerney JO.

Genome Biol Evol. 2016 May 13;8(5):1388-400. doi: 10.1093/gbe/evw077.

14.

Natural decay process affects the abundance and community structure of Bacteria and Archaea in Picea abies logs.

Rinta-Kanto JM, Sinkko H, Rajala T, Al-Soud WA, Sørensen SJ, Tamminen MV, Timonen S.

FEMS Microbiol Ecol. 2016 Jul;92(7). pii: fiw087. doi: 10.1093/femsec/fiw087. Epub 2016 Apr 27.

PMID:
27127195
15.

Fertilizing with Animal Manure Disseminates Antibiotic Resistance Genes to the Farm Environment.

Ruuskanen M, Muurinen J, Meierjohan A, Pärnänen K, Tamminen M, Lyra C, Kronberg L, Virta M.

J Environ Qual. 2016 Mar;45(2):488-93. doi: 10.2134/jeq2015.05.0250.

PMID:
27065395
16.

Aquaculture changes the profile of antibiotic resistance and mobile genetic element associated genes in Baltic Sea sediments.

Muziasari WI, Pärnänen K, Johnson TA, Lyra C, Karkman A, Stedtfeld RD, Tamminen M, Tiedje JM, Virta M.

FEMS Microbiol Ecol. 2016 Apr;92(4):fiw052. doi: 10.1093/femsec/fiw052. Epub 2016 Mar 13.

PMID:
26976842
17.

High-throughput quantification of antibiotic resistance genes from an urban wastewater treatment plant.

Karkman A, Johnson TA, Lyra C, Stedtfeld RD, Tamminen M, Tiedje JM, Virta M.

FEMS Microbiol Ecol. 2016 Mar;92(3). pii: fiw014. doi: 10.1093/femsec/fiw014. Epub 2016 Jan 31.

PMID:
26832203
18.

Massively parallel sequencing of single cells by epicPCR links functional genes with phylogenetic markers.

Spencer SJ, Tamminen MV, Preheim SP, Guo MT, Briggs AW, Brito IL, A Weitz D, Pitkänen LK, Vigneault F, Juhani Virta MP, Alm EJ.

ISME J. 2016 Feb;10(2):427-36. doi: 10.1038/ismej.2015.124. Epub 2015 Sep 22.

19.

Single gene-based distinction of individual microbial genomes from a mixed population of microbial cells.

Tamminen MV, Virta MP.

Front Microbiol. 2015 Mar 11;6:195. doi: 10.3389/fmicb.2015.00195. eCollection 2015.

20.

Sulphonamide and trimethoprim resistance genes persist in sediments at Baltic Sea aquaculture farms but are not detected in the surrounding environment.

Muziasari WI, Managaki S, Pärnänen K, Karkman A, Lyra C, Tamminen M, Suzuki S, Virta M.

PLoS One. 2014 Mar 20;9(3):e92702. doi: 10.1371/journal.pone.0092702. eCollection 2014.

21.

Internet-based CBT intervention for gamblers in Finland: experiences from the field.

Castrén S, Pankakoski M, Tamminen M, Lipsanen J, Ladouceur R, Lahti T.

Scand J Psychol. 2013 Jun;54(3):230-5. doi: 10.1111/sjop.12034. Epub 2013 Feb 8.

22.

Large-scale analysis of plasmid relationships through gene-sharing networks.

Tamminen M, Virta M, Fani R, Fondi M.

Mol Biol Evol. 2012 Apr;29(4):1225-40. doi: 10.1093/molbev/msr292. Epub 2011 Nov 29.

PMID:
22130968
23.

Cold temperature decreases bacterial species richness in nitrogen-removing bioreactors treating inorganic mine waters.

Karkman A, Mattila K, Tamminen M, Virta M.

Biotechnol Bioeng. 2011 Dec;108(12):2876-83. doi: 10.1002/bit.23267. Epub 2011 Aug 4.

PMID:
21769859
24.

Fish farming affects the abundance and diversity of the mercury resistance gene merA in marine sediments.

Pitkänen LK, Tamminen M, Hynninen A, Karkman A, Corander J, Kotilainen A, Virta M.

Microbes Environ. 2011;26(3):205-11. Epub 2011 May 11.

25.

Tetracycline resistance genes persist at aquaculture farms in the absence of selection pressure.

Tamminen M, Karkman A, Lõhmus A, Muziasari WI, Takasu H, Wada S, Suzuki S, Virta M.

Environ Sci Technol. 2011 Jan 15;45(2):386-91. doi: 10.1021/es102725n. Epub 2010 Dec 15.

PMID:
21158437
26.

Genetic and environmental determinants of total and high-molecular weight adiponectin in families with low HDL-cholesterol and early onset coronary heart disease.

Kangas-Kontio T, Huotari A, Ruotsalainen H, Herzig KH, Tamminen M, Ala-Korpela M, Savolainen MJ, Kakko S.

Atherosclerosis. 2010 Jun;210(2):479-85. doi: 10.1016/j.atherosclerosis.2009.12.022. Epub 2009 Dec 21.

PMID:
20056223
27.

Genome scan for loci regulating HDL cholesterol levels in Finnish extended pedigrees with early coronary heart disease.

Kangas-Kontio T, Kakko S, Tamminen M, von Rohr P, Hoeschele I, Juvonen T, Kere J, Savolainen MJ.

Eur J Hum Genet. 2010 May;18(5):604-13. doi: 10.1038/ejhg.2009.202. Epub 2009 Nov 25.

28.

GATA-4 regulates Bcl-2 expression in ovarian granulosa cell tumors.

Kyrönlahti A, Rämö M, Tamminen M, Unkila-Kallio L, Butzow R, Leminen A, Nemer M, Rahman N, Huhtaniemi I, Heikinheimo M, Anttonen M.

Endocrinology. 2008 Nov;149(11):5635-42. doi: 10.1210/en.2008-0148. Epub 2008 Jul 24.

PMID:
18653721
29.

Quantification of ecotoxicological tests based on bioluminescence using Polaroid film.

Tamminen MV, Virta MP.

Chemosphere. 2007 Jan;66(7):1329-35. Epub 2006 Sep 1.

PMID:
16949132
30.

Screening of lactic acid bacteria from fermented vegetables by carbohydrate profiling and PCR-ELISA.

Tamminen M, Joutsjoki T, Sjöblom M, Joutsen M, Palva A, Ryhänen EL, Joutsjoki V.

Lett Appl Microbiol. 2004;39(5):439-44.

31.

Women and men have similar amounts of liver and intra-abdominal fat, despite more subcutaneous fat in women: implications for sex differences in markers of cardiovascular risk.

Westerbacka J, Cornér A, Tiikkainen M, Tamminen M, Vehkavaara S, Häkkinen AM, Fredriksson J, Yki-Järvinen H.

Diabetologia. 2004 Aug;47(8):1360-9. Epub 2004 Jul 28.

PMID:
15309287
32.

Comparison of in vivo effects of nitroglycerin and insulin on the aortic pressure waveform.

Westerbacka J, Tamminen M, Cockcroft J, Yki-Järvinen H.

Eur J Clin Invest. 2004 Jan;34(1):1-8.

PMID:
14984431
33.

Effects of equal weight loss with orlistat and placebo on body fat and serum fatty acid composition and insulin resistance in obese women.

Tiikkainen M, Bergholm R, Rissanen A, Aro A, Salminen I, Tamminen M, Teramo K, Yki-Järvinen H.

Am J Clin Nutr. 2004 Jan;79(1):22-30.

PMID:
14684393
34.

Insulin therapy improves insulin actions on glucose metabolism and aortic wave reflection in type 2 diabetic patients.

Tamminen MK, Westerbacka J, Vehkavaara S, Yki-Järvinen H.

Eur J Clin Invest. 2003 Oct;33(10):855-60.

PMID:
14511356
35.

Candidate locus analysis of familial ascending aortic aneurysms and dissections confirms the linkage to the chromosome 5q13-14 in Finnish families.

Kakko S, Räisänen T, Tamminen M, Airaksinen J, Groundstroem K, Juvonen T, Ylitalo A, Uusimaa P, Savolainen MJ.

J Thorac Cardiovasc Surg. 2003 Jul;126(1):106-13.

36.

Obesity is associated with impaired platelet-inhibitory effect of acetylsalicylic acid in nondiabetic subjects.

Tamminen M, Lassila R, Westerbacka J, Vehkavaara S, Yki-Järvinen H.

Int J Obes Relat Metab Disord. 2003 Aug;27(8):907-11.

PMID:
12861231
37.

Lowering of LDL cholesterol rather than moderate weight loss improves endothelium-dependent vasodilatation in obese women with previous gestational diabetes.

Bergholm R, Tiikkainen M, Vehkavaara S, Tamminen M, Teramo K, Rissanen A, Yki-Järvinen H.

Diabetes Care. 2003 Jun;26(6):1667-72.

PMID:
12766091
38.

Effects of identical weight loss on body composition and features of insulin resistance in obese women with high and low liver fat content.

Tiikkainen M, Bergholm R, Vehkavaara S, Rissanen A, Häkkinen AM, Tamminen M, Teramo K, Yki-Järvinen H.

Diabetes. 2003 Mar;52(3):701-7.

39.

ATP-binding cassette transporter A1 locus is not a major determinant of HDL-C levels in a population at high risk for coronary heart disease.

Kakko S, Kelloniemi J, von Rohr P, Hoeschele I, Tamminen M, Brousseau ME, Kesäniemi YA, Savolainen MJ.

Atherosclerosis. 2003 Feb;166(2):285-90.

PMID:
12535741
40.

Insulin-induced decreases in aortic wave reflection and central systolic pressure are impaired in type 2 diabetes.

Tamminen M, Westerbacka J, Vehkavaara S, Yki-Järvinen H.

Diabetes Care. 2002 Dec;25(12):2314-9.

PMID:
12453979
41.

Liver-fat accumulation and insulin resistance in obese women with previous gestational diabetes.

Tiikkainen M, Tamminen M, Häkkinen AM, Bergholm R, Vehkavaara S, Halavaara J, Teramo K, Rissanen A, Yki-Järvinen H.

Obes Res. 2002 Sep;10(9):859-67.

42.

Learning difficulties, social intelligence, and self-concept: connections to bully-victim problems.

Kaukiainen A, Salmivalli C, Lagerspetz K, Tamminen M, Vauras M, Mäki H, Poskiparta E.

Scand J Psychol. 2002 Jul;43(3):269-78.

PMID:
12184482
43.

Recombinant Lactococcus starters as a potential source of additional peptidolytic activity in cheese ripening.

Joutsjoki V, Luoma S, Tamminen M, Kilpi M, Johansen E, Palva A.

J Appl Microbiol. 2002;92(6):1159-66.

44.

Variation at the cholesteryl ester transfer protein gene in relation to plasma high density lipoproteins cholesterol levels and carotid intima-media thickness.

Kakko S, Tamminen M, Päivänsalo M, Kauma H, Rantala AO, Lilja M, Reunanen A, Kesäniemi YA, Savolainen MJ.

Eur J Clin Invest. 2001 Jul;31(7):593-602.

PMID:
11454014
45.

Chlamydia pneumoniae does not increase atherosclerosis in the aortic root of apolipoprotein E-deficient mice.

Aalto-Setälä K, Laitinen K, Erkkilä L, Leinonen M, Jauhiainen M, Ehnholm C, Tamminen M, Puolakkainen M, Penttilä I, Saikku P.

Arterioscler Thromb Vasc Biol. 2001 Apr;21(4):578-84.

PMID:
11304476
46.

Expression of six peptidases from Lactobacillus helveticus in Lactococcus lactis.

Luoma S, Peltoniemi K, Joutsjoki V, Rantanen T, Tamminen M, Heikkinen I, Palva A.

Appl Environ Microbiol. 2001 Mar;67(3):1232-8.

47.

Cholesteryl ester transfer protein gene polymorphisms are associated with carotid atherosclerosis in men.

Kakko S, Tamminen M, Päivänsalo M, Kauma H, Rantala AO, Lilja M, Reunanen A, Kesäniemi YA, Savolainen MJ.

Eur J Clin Invest. 2000 Jan;30(1):18-25.

PMID:
10619997
48.

Apo A-I inhibits foam cell formation in Apo E-deficient mice after monocyte adherence to endothelium.

Dansky HM, Charlton SA, Barlow CB, Tamminen M, Smith JD, Frank JS, Breslow JL.

J Clin Invest. 1999 Jul;104(1):31-9.

49.

Ultrastructure of early lipid accumulation in ApoE-deficient mice.

Tamminen M, Mottino G, Qiao JH, Breslow JL, Frank JS.

Arterioscler Thromb Vasc Biol. 1999 Apr;19(4):847-53.

PMID:
10195908
50.

Type XIII collagen is identified as a plasma membrane protein.

Hägg P, Rehn M, Huhtala P, Väisänen T, Tamminen M, Pihlajaniemi T.

J Biol Chem. 1998 Jun 19;273(25):15590-7.

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