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Items: 1 to 50 of 104

1.

Draft genomes of Cronobacter sakazakii strains isolated from dried spices bring unique insights into the diversity of plant-associated strains.

Jang H, Woo J, Lee Y, Negrete F, Finkelstein S, Chase HR, Addy N, Ewing L, Beaubrun JJG, Patel I, Gangiredla J, Eshwar A, Jaradat ZW, Seo K, Shabarinath S, Fanning S, Stephan R, Lehner A, Tall BD, Gopinath GR.

Stand Genomic Sci. 2018 Nov 29;13:35. doi: 10.1186/s40793-018-0339-6. eCollection 2018.

2.

RNA Sequencing-Based Transcriptional Overview of Xerotolerance in Cronobacter sakazakii SP291.

Srikumar S, Cao Y, Yan Q, Van Hoorde K, Nguyen S, Cooney S, Gopinath GR, Tall BD, Sivasankaran SK, Lehner A, Stephan R, Fanning S.

Appl Environ Microbiol. 2019 Jan 23;85(3). pii: e01993-18. doi: 10.1128/AEM.01993-18. Print 2019 Feb 1.

PMID:
30446557
3.

Analysis of enterotoxigenic Bacillus cereus strains from dried foods using whole genome sequencing, multi-locus sequence analysis and toxin gene prevalence and distribution using endpoint PCR analysis.

Carter L, Chase HR, Gieseker CM, Hasbrouck NR, Stine CB, Khan A, Ewing-Peeples LJ, Tall BD, Gopinath GR.

Int J Food Microbiol. 2018 Nov 2;284:31-39. doi: 10.1016/j.ijfoodmicro.2018.06.016. Epub 2018 Jun 27.

4.

Whole-Genome Sequences of Cronobacter sakazakii Isolates Obtained from Foods of Plant Origin and Dried-Food Manufacturing Environments.

Jang H, Addy N, Ewing L, Jean-Gilles Beaubrun J, Lee Y, Woo J, Negrete F, Finkelstein S, Tall BD, Lehner A, Eshwar A, Gopinath GR.

Genome Announc. 2018 Apr 12;6(15). pii: e00223-18. doi: 10.1128/genomeA.00223-18.

5.

A hybrid reference-guided de novo assembly approach for generating Cyclospora mitochondrion genomes.

Gopinath GR, Cinar HN, Murphy HR, Durigan M, Almeria M, Tall BD, DaSilva AJ.

Gut Pathog. 2018 Apr 10;10:15. doi: 10.1186/s13099-018-0242-0. eCollection 2018.

6.

Genomic characterization of malonate positive Cronobacter sakazakii serotype O:2, sequence type 64 strains, isolated from clinical, food, and environment samples.

Gopinath GR, Chase HR, Gangiredla J, Eshwar A, Jang H, Patel I, Negrete F, Finkelstein S, Park E, Chung T, Yoo Y, Woo J, Lee Y, Park J, Choi H, Jeong S, Jun S, Kim M, Lee C, Jeong H, Fanning S, Stephan R, Iversen C, Reich F, Klein G, Lehner A, Tall BD.

Gut Pathog. 2018 Mar 10;10:11. doi: 10.1186/s13099-018-0238-9. eCollection 2018.

7.

Draft Genome Sequence of Cronobacter sakazakii GP1999, Sequence Type 145, an Epiphytic Isolate Obtained from the Tomato's Rhizoplane/Rhizosphere Continuum.

Chase HR, Eberl L, Stephan R, Jeong H, Lee C, Finkelstein S, Negrete F, Gangiredla J, Patel I, Tall BD, Gopinath GR, Lehner A.

Genome Announc. 2017 Aug 3;5(31). pii: e00723-17. doi: 10.1128/genomeA.00723-17.

8.

Salmonella enterica serovar Infantis from Food and Human Infections, Switzerland, 2010-2015: Poultry-Related Multidrug Resistant Clones and an Emerging ESBL Producing Clonal Lineage.

Hindermann D, Gopinath G, Chase H, Negrete F, Althaus D, Zurfluh K, Tall BD, Stephan R, Nüesch-Inderbinen M.

Front Microbiol. 2017 Jul 13;8:1322. doi: 10.3389/fmicb.2017.01322. eCollection 2017.

9.

Comparative Genomic Characterization of the Highly Persistent and Potentially Virulent Cronobacter sakazakii ST83, CC65 Strain H322 and Other ST83 Strains.

Chase HR, Gopinath GR, Eshwar AK, Stoller A, Fricker-Feer C, Gangiredla J, Patel IR, Cinar HN, Jeong H, Lee C, Negrete F, Finkelstein S, Stephan R, Tall BD, Lehner A.

Front Microbiol. 2017 Jun 26;8:1136. doi: 10.3389/fmicb.2017.01136. eCollection 2017.

10.

Use of a Pan-Genomic DNA Microarray in Determination of the Phylogenetic Relatedness among Cronobacter spp. and Its Use as a Data Mining Tool to Understand Cronobacter Biology.

Tall BD, Gangiredla J, Grim CJ, Patel IR, Jackson SA, Mammel MK, Kothary MH, Sathyamoorthy V, Carter L, Fanning S, Iversen C, Pagotto F, Stephan R, Lehner A, Farber J, Yan QQ, Gopinath GR.

Microarrays (Basel). 2017 Mar 4;6(1). pii: E6. doi: 10.3390/microarrays6010006. Review.

11.

Analysis and Characterization of Proteins Associated with Outer Membrane Vesicles Secreted by Cronobacter spp.

Kothary MH, Gopinath GR, Gangiredla J, Rallabhandi PV, Harrison LM, Yan QQ, Chase HR, Lee B, Park E, Yoo Y, Chung T, Finkelstein SB, Negrete FJ, Patel IR, Carter L, Sathyamoorthy V, Fanning S, Tall BD.

Front Microbiol. 2017 Feb 9;8:134. doi: 10.3389/fmicb.2017.00134. eCollection 2017.

12.

Draft Genome Sequences of Enterotoxigenic Bacillus cereus Strains Obtained from Powdered Infant Formula.

Carter L, Chase HR, Choi H, Jun S, Park J, Jeong S, Kim M, Han K, Lee C, Jeong H, Finkelstein S, Negrete F, Cinar HN, Tall BD, Gopinath GR.

Genome Announc. 2017 Feb 23;5(8). pii: e01644-16. doi: 10.1128/genomeA.01644-16.

13.

Increased secretion of exopolysaccharide and virulence potential of a mucoid variant of Salmonella enterica serovar Montevideo under environmental stress.

Jean-Gilles Beaubrun J, Tall BD, Flamer ML, Patel I, Gopinath G, Auguste W, Jean C, George M, Tartera C, Ewing L, Hanes DE.

Microb Pathog. 2017 Feb;103:107-113. doi: 10.1016/j.micpath.2016.12.005. Epub 2016 Dec 21.

PMID:
28012986
14.

Genome Sequences of Malonate-Positive Cronobacter sakazakii Serogroup O:2, Sequence Type 64 Strains CDC 1121-73 and GK1025, Isolated from Human Bronchial Wash and a Powdered Infant Formula Manufacturing Plant.

Chase HR, Gopinath GR, Gangiredla J, Patel IR, Kothary MH, Carter L, Sathyamoorthy V, Lee B, Park E, Yoo YJ, Chung TJ, Choi H, Jun S, Park J, Jeong S, Kim M, Reich F, Klein G, Tall BD.

Genome Announc. 2016 Nov 10;4(6). pii: e01072-16. doi: 10.1128/genomeA.01072-16.

15.

Diverse profiles of N-acyl-homoserine lactones in biofilm forming isolates of Cronobacter sakazakii.

Tall BD, Chase HR, Gopinath GR.

Virulence. 2017 Apr 3;8(3):246-247. doi: 10.1080/21505594.2016.1240861. Epub 2016 Sep 27. No abstract available.

16.

Purification and Characterization of a Rabbit Serum Factor That Kills Listeria Species and Other Foodborne Bacterial Pathogens.

Kothary MH, Franco AA, Tall BD, Gopinath GR, Datta AR.

Foodborne Pathog Dis. 2016 Aug;13(8):441-7. doi: 10.1089/fpd.2015.2109. Epub 2016 Jul 25.

PMID:
27455064
17.

Linking Genomo- and Pathotype: Exploiting the Zebrafish Embryo Model to Investigate the Divergent Virulence Potential among Cronobacter spp.

Eshwar AK, Tall BD, Gangiredla J, Gopinath GR, Patel IR, Neuhauss SC, Stephan R, Lehner A.

PLoS One. 2016 Jun 29;11(6):e0158428. doi: 10.1371/journal.pone.0158428. eCollection 2016.

18.

Fabrication of Polymerase Chain Reaction Plastic Lab-on-a-Chip Device for Rapid Molecular Diagnoses.

Trinh KT, Zhang H, Kang DJ, Kahng SH, Tall BD, Lee NY.

Int Neurourol J. 2016 May;20(Suppl 1):S38-48. doi: 10.5213/inj.1632602.301. Epub 2016 May 26.

19.

Genomic evidence reveals numerous Salmonella enterica serovar Newport reintroduction events in Suwannee watershed irrigation ponds.

Li B, Jackson SA, Gangiredla J, Wang W, Liu H, Tall BD, Beaubrun JJ, Jay-Russell M, Vellidis G, Elkins CA.

Appl Environ Microbiol. 2015 Dec;81(24):8243-53. doi: 10.1128/AEM.02179-15. Epub 2015 Sep 18.

20.

Analysis of the cellulose synthase operon genes, bcsA, bcsB, and bcsC in Cronobacter species: Prevalence among species and their roles in biofilm formation and cell-cell aggregation.

Hu L, Grim CJ, Franco AA, Jarvis KG, Sathyamoorthy V, Kothary MH, McCardell BA, Tall BD.

Food Microbiol. 2015 Dec;52:97-105. doi: 10.1016/j.fm.2015.07.007. Epub 2015 Jul 7.

PMID:
26338122
21.
22.

Genome Sequence of Cronobacter sakazakii Serogroup O:4, Sequence Type 4 Strain CDC 2009-03746, Isolated from a Fatal Case of Infantile Meningitis.

Grim CJ, Gopinath GR, Jarvis KG, Sathyamoorthy V, Trach LH, Chase HR, Tall BD.

Genome Announc. 2015 May 21;3(3). pii: e00492-15. doi: 10.1128/genomeA.00492-15.

23.

A proposed harmonized LPS molecular-subtyping scheme for Cronobacter species.

Yan Q, Jarvis KG, Chase HR, Hébert K, Trach LH, Lee C, Sadowski J, Lee B, Hwang S, Sathyamoorthy V, Mullane N, Pava-Ripoll M, Iversen C, Pagotto F, Fanning S, Tall BD.

Food Microbiol. 2015 Sep;50:38-43. doi: 10.1016/j.fm.2015.03.003. Epub 2015 Mar 17.

PMID:
25998813
24.

Development of a Custom-Designed, Pan Genomic DNA Microarray to Characterize Strain-Level Diversity among Cronobacter spp.

Tall BD, Gangiredla J, Gopinath GR, Yan Q, Chase HR, Lee B, Hwang S, Trach L, Park E, Yoo Y, Chung T, Jackson SA, Patel IR, Sathyamoorthy V, Pava-Ripoll M, Kotewicz ML, Carter L, Iversen C, Pagotto F, Stephan R, Lehner A, Fanning S, Grim CJ.

Front Pediatr. 2015 Apr 30;3:36. doi: 10.3389/fped.2015.00036. eCollection 2015.

25.

Comparative Genotypic and Phenotypic Analysis of Cronobacter Species Cultured from Four Powdered Infant Formula Production Facilities: Indication of Pathoadaptation along the Food Chain.

Yan Q, Wang J, Gangiredla J, Cao Y, Martins M, Gopinath GR, Stephan R, Lampel K, Tall BD, Fanning S.

Appl Environ Microbiol. 2015 Jul;81(13):4388-402. doi: 10.1128/AEM.00359-15. Epub 2015 Apr 24.

26.

Cronobacter: an emergent pathogen causing meningitis to neonates through their feeds.

Tall BD, Chen Y, Yan Q, Gopinath GR, Grim CJ, Jarvis KG, Fanning S, Lampel KA.

Sci Prog. 2014;97(Pt 2):154-72.

PMID:
25108996
28.

Cronobacter spp.--opportunistic food-borne pathogens. A review of their virulence and environmental-adaptive traits.

Jaradat ZW, Al Mousa W, Elbetieha A, Al Nabulsi A, Tall BD.

J Med Microbiol. 2014 Aug;63(Pt 8):1023-37. doi: 10.1099/jmm.0.073742-0. Epub 2014 May 30. Review.

PMID:
24878566
29.

Genomic and phenotypic characterization of Vibrio cholerae non-O1 isolates from a US Gulf Coast cholera outbreak.

Haley BJ, Choi SY, Grim CJ, Onifade TJ, Cinar HN, Tall BD, Taviani E, Hasan NA, Abdullah AH, Carter L, Sahu SN, Kothary MH, Chen A, Baker R, Hutchinson R, Blackmore C, Cebula TA, Huq A, Colwell RR.

PLoS One. 2014 Apr 3;9(4):e86264. doi: 10.1371/journal.pone.0086264. eCollection 2014.

30.

Genome Sequence of an Enterobacter helveticus Strain, 1159/04 (LMG 23733), Isolated from Fruit Powder.

Grim CJ, Gopinath GR, Mammel MK, Sathyamoorthy V, Trach LH, Chase HR, Tall BD, Fanning S, Stephan R.

Genome Announc. 2013 Dec 12;1(6). pii: e01038-13. doi: 10.1128/genomeA.01038-13.

31.

Genome Sequence of Enterobacter turicensis Strain 610/05 (LMG 23731), Isolated from Fruit Powder.

Stephan R, Grim CJ, Gopinath GR, Mammel MK, Sathyamoorthy V, Trach LH, Chase HR, Fanning S, Tall BD.

Genome Announc. 2013 Dec 26;1(6). pii: e00996-13. doi: 10.1128/genomeA.00996-13.

32.

Genome Sequences of Two Enterobacter pulveris Strains, 601/05T (=LMG 24057T =DSM 19144T) and 1160/04 (=LMG 24058 =DSM 19146), Isolated from Fruit Powder.

Gopinath GR, Grim CJ, Tall BD, Mammel MK, Sathyamoorthy V, Trach LH, Chase HR, Fanning S, Stephan R.

Genome Announc. 2013 Dec 5;1(6). pii: e00991-13. doi: 10.1128/genomeA.00991-13.

33.

Complete genome sequence and phenotype microarray analysis of Cronobacter sakazakii SP291: a persistent isolate cultured from a powdered infant formula production facility.

Yan Q, Power KA, Cooney S, Fox E, Gopinath GR, Grim CJ, Tall BD, McCusker MP, Fanning S.

Front Microbiol. 2013 Sep 2;4:256. doi: 10.3389/fmicb.2013.00256. eCollection 2013.

34.

Diversity, distribution and antibiotic resistance of Enterococcus spp. recovered from tomatoes, leaves, water and soil on U.S. Mid-Atlantic farms.

Micallef SA, Goldstein RE, George A, Ewing L, Tall BD, Boyer MS, Joseph SW, Sapkota AR.

Food Microbiol. 2013 Dec;36(2):465-74. doi: 10.1016/j.fm.2013.04.016. Epub 2013 May 9.

PMID:
24010630
35.

Pan-genome analysis of the emerging foodborne pathogen Cronobacter spp. suggests a species-level bidirectional divergence driven by niche adaptation.

Grim CJ, Kotewicz ML, Power KA, Gopinath G, Franco AA, Jarvis KG, Yan QQ, Jackson SA, Sathyamoorthy V, Hu L, Pagotto F, Iversen C, Lehner A, Stephan R, Fanning S, Tall BD.

BMC Genomics. 2013 May 31;14:366. doi: 10.1186/1471-2164-14-366.

36.

Characterization of Aeromonas hydrophila wound pathotypes by comparative genomic and functional analyses of virulence genes.

Grim CJ, Kozlova EV, Sha J, Fitts EC, van Lier CJ, Kirtley ML, Joseph SJ, Read TD, Burd EM, Tall BD, Joseph SW, Horneman AJ, Chopra AK, Shak JR.

MBio. 2013 Apr 23;4(2):e00064-13. doi: 10.1128/mBio.00064-13.

37.

Identification and characterization of five new molecular serogroups of Cronobacter spp.

Jarvis KG, Yan QQ, Grim CJ, Power KA, Franco AA, Hu L, Gopinath G, Sathyamoorthy V, Kotewicz ML, Kothary MH, Lee C, Sadowski J, Fanning S, Tall BD.

Foodborne Pathog Dis. 2013 Apr;10(4):343-52. doi: 10.1089/fpd.2012.1344.

PMID:
23566272
38.

The Pathogen-annotated Tracking Resource Network (PATRN) system: a web-based resource to aid food safety, regulatory science, and investigations of foodborne pathogens and disease.

Gopinath G, Hari K, Jain R, Mammel MK, Kothary MH, Franco AA, Grim CJ, Jarvis KG, Sathyamoorthy V, Hu L, Datta AR, Patel IR, Jackson SA, Gangiredla J, Kotewicz ML, LeClerc JE, Wekell M, McCardell BA, Solomotis MD, Tall BD.

Food Microbiol. 2013 Jun;34(2):303-18. doi: 10.1016/j.fm.2013.01.001. Epub 2013 Jan 23.

PMID:
23541197
39.

Multiplex PCR assay targeting a diguanylate cyclase-encoding gene, cgcA, to differentiate species within the genus Cronobacter.

Carter L, Lindsey LA, Grim CJ, Sathyamoorthy V, Jarvis KG, Gopinath G, Lee C, Sadowski JA, Trach L, Pava-Ripoll M, McCardell BA, Tall BD, Hu L.

Appl Environ Microbiol. 2013 Jan;79(2):734-7. doi: 10.1128/AEM.02898-12. Epub 2012 Nov 9.

40.

Identification and characterization of Cronobacter iron acquisition systems.

Grim CJ, Kothary MH, Gopinath G, Jarvis KG, Beaubrun JJ, McClelland M, Tall BD, Franco AA.

Appl Environ Microbiol. 2012 Sep;78(17):6035-50. doi: 10.1128/AEM.01457-12. Epub 2012 Jun 15.

41.

The evaluation of a PCR-based method for identification of Salmonella enterica serotypes from environmental samples and various food matrices.

Jean-Gilles Beaubrun J, Cheng CM, Chen KS, Ewing L, Wang H, Agpaoa MC, Huang MC, Dickey E, Du JM, Williams-Hill DM, Hamilton B, Micallef SA, Rosenberg Goldstein RE, George A, Joseph SW, Sapkota AR, Jacobson AP, Tall BD, Kothary MH, Dudley K, Hanes DE.

Food Microbiol. 2012 Sep;31(2):199-209. doi: 10.1016/j.fm.2012.03.016. Epub 2012 Apr 10.

PMID:
22608224
42.

Cronobacter species (formerly known as Enterobacter sakazakii) in powdered infant formula: a review of our current understanding of the biology of this bacterium.

Yan QQ, Condell O, Power K, Butler F, Tall BD, Fanning S.

J Appl Microbiol. 2012 Jul;113(1):1-15. doi: 10.1111/j.1365-2672.2012.05281.x. Epub 2012 Apr 11. Review.

43.

Occurrence and antibiotic resistance of multiple Salmonella serotypes recovered from water, sediment and soil on mid-Atlantic tomato farms.

Micallef SA, Rosenberg Goldstein RE, George A, Kleinfelter L, Boyer MS, McLaughlin CR, Estrin A, Ewing L, Jean-Gilles Beaubrun J, Hanes DE, Kothary MH, Tall BD, Razeq JH, Joseph SW, Sapkota AR.

Environ Res. 2012 Apr;114:31-9. doi: 10.1016/j.envres.2012.02.005. Epub 2012 Mar 8.

PMID:
22406288
44.

Temperature regulation of virulence factors in the pathogen Vibrio coralliilyticus.

Kimes NE, Grim CJ, Johnson WR, Hasan NA, Tall BD, Kothary MH, Kiss H, Munk AC, Tapia R, Green L, Detter C, Bruce DC, Brettin TS, Colwell RR, Morris PJ.

ISME J. 2012 Apr;6(4):835-46. doi: 10.1038/ismej.2011.154. Epub 2011 Dec 8.

45.

Cronobacter spp. (previously Enterobacter sakazakii) invade and translocate across both cultured human intestinal epithelial cells and human brain microvascular endothelial cells.

Giri CP, Shima K, Tall BD, Curtis S, Sathyamoorthy V, Hanisch B, Kim KS, Kopecko DJ.

Microb Pathog. 2012 Feb;52(2):140-7. doi: 10.1016/j.micpath.2011.10.003. Epub 2011 Oct 18.

PMID:
22023990
46.

Cloning and partial characterization of a novel hemolysin gene of Vibrio tubiashii and the development of a PCR-based detection assay.

Sathyamoorthy V, Datta AR, Lee CJ, Kothary MH, McCardell BA, Tall BD.

Can J Microbiol. 2011 Sep;57(9):714-21. doi: 10.1139/w11-058. Epub 2011 Aug 19.

PMID:
21854089
47.

Influence of iron-chelated growth conditions on outer membrane protein production and virulence of Vibrio tubiashii.

Jean-Gilles Beaubrun J, Gopinath G, Kothary MH, Franco A, Curtis SK, Eribo BE, Tall BD.

Food Microbiol. 2011 Oct;28(7):1409-13. doi: 10.1016/j.fm.2011.04.003. Epub 2011 May 4.

PMID:
21839393
48.

Molecular characterization of Cronobacter lipopolysaccharide O-antigen gene clusters and development of serotype-specific PCR assays.

Jarvis KG, Grim CJ, Franco AA, Gopinath G, Sathyamoorthy V, Hu L, Sadowski JA, Lee CS, Tall BD.

Appl Environ Microbiol. 2011 Jun;77(12):4017-26. doi: 10.1128/AEM.00162-11. Epub 2011 Apr 29.

49.

Characterization of putative virulence genes on the related RepFIB plasmids harbored by Cronobacter spp.

Franco AA, Hu L, Grim CJ, Gopinath G, Sathyamoorthy V, Jarvis KG, Lee C, Sadowski J, Kim J, Kothary MH, McCardell BA, Tall BD.

Appl Environ Microbiol. 2011 May;77(10):3255-67. doi: 10.1128/AEM.03023-10. Epub 2011 Mar 18.

50.

Cpa, the outer membrane protease of Cronobacter sakazakii, activates plasminogen and mediates resistance to serum bactericidal activity.

Franco AA, Kothary MH, Gopinath G, Jarvis KG, Grim CJ, Hu L, Datta AR, McCardell BA, Tall BD.

Infect Immun. 2011 Apr;79(4):1578-87. doi: 10.1128/IAI.01165-10. Epub 2011 Jan 18.

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