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Items: 1 to 50 of 138

1.

Experimental evolutionary studies on the genetic autonomy of the cytoplasmic genome "plasmon" in the Triticum (wheat)-Aegilops complex.

Tsunewaki K, Mori N, Takumi S.

Proc Natl Acad Sci U S A. 2019 Feb 19;116(8):3082-3090. doi: 10.1073/pnas.1817037116. Epub 2019 Feb 6.

PMID:
30728293
2.

Origin of wheat B-genome chromosomes inferred from RNA sequencing analysis of leaf transcripts from section Sitopsis species of Aegilops.

Miki Y, Yoshida K, Mizuno N, Nasuda S, Sato K, Takumi S.

DNA Res. 2019 Jan 30. doi: 10.1093/dnares/dsy047. [Epub ahead of print]

PMID:
30715317
3.

RNA Sequencing-Based Bulked Segregant Analysis Facilitates Efficient D-genome Marker Development for a Specific Chromosomal Region of Synthetic Hexaploid Wheat.

Nishijima R, Yoshida K, Sakaguchi K, Yoshimura SI, Sato K, Takumi S.

Int J Mol Sci. 2018 Nov 26;19(12). pii: E3749. doi: 10.3390/ijms19123749.

4.

RNA-seq analysis reveals considerable genetic diversity and provides genetic markers saturating all chromosomes in the diploid wild wheat relative Aegilops umbellulata.

Okada M, Yoshida K, Nishijima R, Michikawa A, Motoi Y, Sato K, Takumi S.

BMC Plant Biol. 2018 Nov 8;18(1):271. doi: 10.1186/s12870-018-1498-8.

5.

Potential role of mitochondrial damage and S9 mixture including metabolic enzymes in ZnO nanoparticles-induced oxidative stress and genotoxicity in Chinese hamster lung (CHL/IU) cells.

Yanagisawa H, Seki Y, Yogosawa S, Takumi S, Shimizu H, Suka M.

Mutat Res. 2018 Oct;834:25-34. doi: 10.1016/j.mrgentox.2018.07.003. Epub 2018 Aug 9.

PMID:
30173861
6.

Genetic mapping of a novel recessive allele for non-glaucousness in wild diploid wheat Aegilops tauschii: implications for the evolution of common wheat.

Nishijima R, Tanaka C, Yoshida K, Takumi S.

Genetica. 2018 Apr;146(2):249-254. doi: 10.1007/s10709-018-0012-4. Epub 2018 Feb 3.

PMID:
29397498
7.

Genotypic effects on sugar and by-products of liquid hydrolysates and on saccharification of acid-insoluble residues from wheat straw.

Ohno R, Teramura H, Ogino C, Kondo A, Takumi S.

Genes Genet Syst. 2018 Jul 13;93(1):1-7. doi: 10.1266/ggs.17-00027. Epub 2018 Jan 17.

8.
9.

Genetic mapping reveals a dominant awn-inhibiting gene related to differentiation of the variety anathera in the wild diploid wheat Aegilops tauschii.

Nishijima R, Ikeda TM, Takumi S.

Genetica. 2018 Feb;146(1):75-84. doi: 10.1007/s10709-017-9998-2. Epub 2017 Nov 3.

PMID:
29101627
10.

Hybrid incompatibilities in interspecific crosses between tetraploid wheat and its wild diploid relative Aegilops umbellulata.

Okada M, Yoshida K, Takumi S.

Plant Mol Biol. 2017 Dec;95(6):625-645. doi: 10.1007/s11103-017-0677-6. Epub 2017 Oct 31.

PMID:
29090430
11.

Differences in glucose yield of residues from among varieties of rice, wheat, and sorghum after dilute acid pretreatment.

Teramura H, Sasaki K, Kawaguchi H, Matsuda F, Kikuchi J, Shirai T, Sazuka T, Yamasaki M, Takumi S, Ogino C, Kondo A.

Biosci Biotechnol Biochem. 2017 Aug;81(8):1650-1656. doi: 10.1080/09168451.2017.1336922. Epub 2017 Jun 16.

PMID:
28622080
12.

Global gene expression profiling related to temperature-sensitive growth abnormalities in interspecific crosses between tetraploid wheat and Aegilops tauschii.

Matsuda R, Iehisa JCM, Sakaguchi K, Ohno R, Yoshida K, Takumi S.

PLoS One. 2017 May 2;12(5):e0176497. doi: 10.1371/journal.pone.0176497. eCollection 2017.

13.

Three dominant awnless genes in common wheat: Fine mapping, interaction and contribution to diversity in awn shape and length.

Yoshioka M, Iehisa JCM, Ohno R, Kimura T, Enoki H, Nishimura S, Nasuda S, Takumi S.

PLoS One. 2017 Apr 24;12(4):e0176148. doi: 10.1371/journal.pone.0176148. eCollection 2017.

14.

Tumor-augmenting effects of gestational arsenic exposure on F1 and F2 in mice.

Nohara K, Suzuki T, Okamura K, Matsushita J, Takumi S.

Genes Environ. 2017 Mar 1;39:3. doi: 10.1186/s41021-016-0069-1. eCollection 2017. Review.

15.

Quantitative trait locus analysis for spikelet shape-related traits in wild wheat progenitor Aegilops tauschii: Implications for intraspecific diversification and subspecies differentiation.

Nishijima R, Okamoto Y, Hatano H, Takumi S.

PLoS One. 2017 Mar 6;12(3):e0173210. doi: 10.1371/journal.pone.0173210. eCollection 2017.

16.

Sulfated glycosaminoglycans and non-classically secreted proteins, basic FGF and epimorphin, coordinately regulate TGF-β-induced cell behaviors of human scar dermal fibroblasts.

Horigome T, Takumi S, Shirai K, Kido T, Hagiwara-Chatani N, Nakashima A, Adachi N, Yano H, Hirai Y.

J Dermatol Sci. 2017 May;86(2):132-141. doi: 10.1016/j.jdermsci.2017.01.014. Epub 2017 Feb 3.

PMID:
28209294
17.

Overexpression of carboxylesterase contributes to the attenuation of cyanotoxin microcystin-LR toxicity.

Takumi S, Shimono T, Ikema S, Hotta Y, Chigwechokha PK, Shiozaki K, Sugiyama Y, Hashimoto M, Furukawa T, Komatsu M.

Comp Biochem Physiol C Toxicol Pharmacol. 2017 Apr;194:22-27. doi: 10.1016/j.cbpc.2017.01.008. Epub 2017 Feb 3.

PMID:
28163251
18.
20.

[Biological effects of arsenic and diseases: The mechanisms involved in arsenic-induced carcinogenesis].

Suzuki T, Takumi S, Okamura K, Nohara K.

Nihon Rinsho. 2016 Jul;74(7):1207-13. Japanese.

PMID:
27455813
21.

Genome-wide identification of novel genetic markers from RNA sequencing assembly of diverse Aegilops tauschii accessions.

Nishijima R, Yoshida K, Motoi Y, Sato K, Takumi S.

Mol Genet Genomics. 2016 Aug;291(4):1681-94. doi: 10.1007/s00438-016-1211-2. Epub 2016 May 3.

PMID:
27142109
22.

Superoxide and Singlet Oxygen Produced within the Thylakoid Membranes Both Cause Photosystem I Photoinhibition.

Takagi D, Takumi S, Hashiguchi M, Sejima T, Miyake C.

Plant Physiol. 2016 Jul;171(3):1626-34. doi: 10.1104/pp.16.00246. Epub 2016 Mar 2.

23.

Eel green fluorescent protein is associated with resistance to oxidative stress.

Funahashi A, Komatsu M, Furukawa T, Yoshizono Y, Yoshizono H, Orikawa Y, Takumi S, Shiozaki K, Hayashi S, Kaminishi Y, Itakura T.

Comp Biochem Physiol C Toxicol Pharmacol. 2016 Mar-Apr;181-182:35-9. doi: 10.1016/j.cbpc.2015.12.009. Epub 2015 Dec 30.

PMID:
26746389
24.

Fine mapping of Hch1, the causal D-genome gene for hybrid chlorosis in interspecific crosses between tetraploid wheat and Aegilops tauschii.

Hirao K, Nishijima R, Sakaguchi K, Takumi S.

Genes Genet Syst. 2015;90(5):283-91. doi: 10.1266/ggs.15-00035. Epub 2015 Dec 18.

25.

Homoeologous copy-specific expression patterns of MADS-box genes for floral formation in allopolyploid wheat.

Tanaka M, Tanaka H, Shitsukawa N, Kitagawa S, Takumi S, Murai K.

Genes Genet Syst. 2016;90(4):217-29. doi: 10.1266/ggs.15-00029. Epub 2015 Nov 25.

26.

Rmg8, a New Gene for Resistance to Triticum Isolates of Pyricularia oryzae in Hexaploid Wheat.

Anh VL, Anh NT, Tagle AG, Vy TT, Inoue Y, Takumi S, Chuma I, Tosa Y.

Phytopathology. 2015 Dec;105(12):1568-72. doi: 10.1094/PHYTO-02-15-0034-R. Epub 2015 Nov 10.

28.

Implications of an inverted duplication in the wheat KN1-type homeobox gene Wknox1 for theorigin of Persian wheat.

Takumi S, Morimoto R.

Genes Genet Syst. 2015;90(2):115-20. doi: 10.1266/ggs.90.115.

29.
30.

A high-resolution physical map integrating an anchored chromosome with the BAC physical maps of wheat chromosome 6B.

Kobayashi F, Wu J, Kanamori H, Tanaka T, Katagiri S, Karasawa W, Kaneko S, Watanabe S, Sakaguchi T, Hanawa Y, Fujisawa H, Kurita K, Abe C, Iehisa JC, Ohno R, Šafář J, Šimková H, Mukai Y, Hamada M, Saito M, Ishikawa G, Katayose Y, Endo TR, Takumi S, Nakamura T, Sato K, Ogihara Y, Hayakawa K, Doležel J, Nasuda S, Matsumoto T, Handa H.

BMC Genomics. 2015 Aug 12;16:595. doi: 10.1186/s12864-015-1803-y.

31.

Okadaic acid is taken-up into the cells mediated by human hepatocytes transporter OATP1B3.

Ikema S, Takumi S, Maeda Y, Kurimoto T, Bohda S, Chigwechokha PK, Sugiyama Y, Shiozaki K, Furukawa T, Komatsu M.

Food Chem Toxicol. 2015 Sep;83:229-36. doi: 10.1016/j.fct.2015.06.006. Epub 2015 Jun 29.

PMID:
26134461
32.

Comparison of gene expression profiles and responses to zinc chloride among inter- and intraspecific hybrids with growth abnormalities in wheat and its relatives.

Takamatsu K, Iehisa JC, Nishijima R, Takumi S.

Plant Mol Biol. 2015 Jul;88(4-5):487-502. doi: 10.1007/s11103-015-0338-6. Epub 2015 Jun 17.

PMID:
26081164
33.

Augmenting effects of gestational arsenite exposure of C3H mice on the hepatic tumors of the F₂ male offspring via the F₁ male offspring.

Nohara K, Okamura K, Suzuki T, Murai H, Ito T, Shinjo K, Takumi S, Michikawa T, Kondo Y, Hata K.

J Appl Toxicol. 2016 Jan;36(1):105-12. doi: 10.1002/jat.3149. Epub 2015 Mar 30.

PMID:
25825268
34.

Naringin attenuates the cytotoxicity of hepatotoxin microcystin-LR by the curious mechanisms to OATP1B1- and OATP1B3-expressing cells.

Takumi S, Ikema S, Hanyu T, Shima Y, Kurimoto T, Shiozaki K, Sugiyama Y, Park HD, Ando S, Furukawa T, Komatsu M.

Environ Toxicol Pharmacol. 2015 Mar;39(2):974-81. doi: 10.1016/j.etap.2015.02.021. Epub 2015 Mar 7.

PMID:
25818985
35.

Accelerated senescence and enhanced disease resistance in hybrid chlorosis lines derived from interspecific crosses between tetraploid wheat and Aegilops tauschii.

Nakano H, Mizuno N, Tosa Y, Yoshida K, Park P, Takumi S.

PLoS One. 2015 Mar 25;10(3):e0121583. doi: 10.1371/journal.pone.0121583. eCollection 2015.

36.

The effect of a methyl-deficient diet on the global DNA methylation and the DNA methylation regulatory pathways.

Takumi S, Okamura K, Yanagisawa H, Sano T, Kobayashi Y, Nohara K.

J Appl Toxicol. 2015 Dec;35(12):1550-6. doi: 10.1002/jat.3117. Epub 2015 Feb 17.

PMID:
25690533
37.

Effects of lithium on growth, maturation, reproduction and gene expression in the nematode Caenorhabditis elegans.

Inokuchi A, Yamamoto R, Morita F, Takumi S, Matsusaki H, Ishibashi H, Tominaga N, Arizono K.

J Appl Toxicol. 2015 Sep;35(9):999-1006. doi: 10.1002/jat.3058. Epub 2015 Jan 21.

PMID:
25644961
38.

Line differences in Cor/Lea and fructan biosynthesis-related gene transcript accumulation are related to distinct freezing tolerance levels in synthetic wheat hexaploids.

Yokota H, Iehisa JC, Shimosaka E, Takumi S.

J Plant Physiol. 2015 Mar 15;176:78-88. doi: 10.1016/j.jplph.2014.12.007. Epub 2014 Dec 18.

PMID:
25577733
39.

QTL analysis of genetic loci affecting domestication-related spike characters in common wheat.

Katkout M, Kishii M, Kawaura K, Mishina K, Sakuma S, Umeda K, Takumi S, Nitta M, Nasuda S, Ogihara Y.

Genes Genet Syst. 2014;89(3):121-31.

40.

Extracellular trafficking of a wheat cold-responsive protein, WLT10.

Ohno R, Takumi S.

J Plant Physiol. 2015 Feb 1;174:71-4. doi: 10.1016/j.jplph.2014.10.004. Epub 2014 Oct 18.

PMID:
25462969
41.

Microcystin-LR induces anoikis resistance to the hepatocyte uptake transporter OATP1B3-expressing cell lines.

Takano H, Takumi S, Ikema S, Mizoue N, Hotta Y, Shiozaki K, Sugiyama Y, Furukawa T, Komatsu M.

Toxicology. 2014 Dec 4;326:53-61. doi: 10.1016/j.tox.2014.10.003. Epub 2014 Oct 16.

PMID:
25456266
42.
43.

A high-density genetic map with array-based markers facilitates structural and quantitative trait locus analyses of the common wheat genome.

Iehisa JC, Ohno R, Kimura T, Enoki H, Nishimura S, Okamoto Y, Nasuda S, Takumi S.

DNA Res. 2014 Oct;21(5):555-67. doi: 10.1093/dnares/dsu020. Epub 2014 Jun 27.

44.

Identification of quantitative trait loci for abscisic acid responsiveness in the D-genome of hexaploid wheat.

Iehisa JC, Matsuura T, Mori IC, Yokota H, Kobayashi F, Takumi S.

J Plant Physiol. 2014 Jun 15;171(10):830-41. doi: 10.1016/j.jplph.2014.02.003. Epub 2014 Feb 22.

PMID:
24877675
46.

Genetic mechanisms of allopolyploid speciation through hybrid genome doubling: novel insights from wheat (Triticum and Aegilops) studies.

Matsuoka Y, Takumi S, Nasuda S.

Int Rev Cell Mol Biol. 2014;309:199-258. doi: 10.1016/B978-0-12-800255-1.00004-1. Review.

PMID:
24529724
47.

Identification of quantitative trait loci controlling grain size and shape in the D genome of synthetic hexaploid wheat lines.

Okamoto Y, Nguyen AT, Yoshioka M, Iehisa JC, Takumi S.

Breed Sci. 2013 Dec;63(4):423-9. doi: 10.1270/jsbbs.63.423. Epub 2013 Dec 1.

48.

Differential contribution of two Ppd-1 homoeoalleles to early-flowering phenotype in Nepalese and Japanese varieties of common wheat.

Nguyen AT, Iehisa JC, Mizuno N, Nitta M, Nasuda S, Takumi S.

Breed Sci. 2013 Dec;63(4):374-83. doi: 10.1270/jsbbs.63.374. Epub 2013 Dec 1.

49.

Genetic effect of the Aegilops caudata plasmon on the manifestation of the Ae. cylindrica genome.

Tsunewaki K, Mori N, Takumi S.

Genes Genet Syst. 2014;89(5):195-202. doi: 10.1266/ggs.89.195.

50.

In vivo mutagenicity of arsenite in the livers of gpt delta transgenic mice.

Takumi S, Aoki Y, Sano T, Suzuki T, Nohmi T, Nohara K.

Mutat Res Genet Toxicol Environ Mutagen. 2014 Jan 15;760:42-7. doi: 10.1016/j.mrgentox.2013.12.001. Epub 2013 Dec 10.

PMID:
24333349

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