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Metabolomic Analysis of Liver Tissues for Characterization of Hepatocellular Carcinoma.

Ferrarini A, Di Poto C, He S, Tu C, Varghese RS, Kara Balla A, Jayatilake M, Li Z, Ghaffari K, Fan Z, Sherif ZA, Kumar D, Kroemer A, Tadesse MG, Ressom HW.

J Proteome Res. 2019 Aug 2;18(8):3067-3076. doi: 10.1021/acs.jproteome.9b00185. Epub 2019 Jul 1.


Adherence to Adjuvant Endocrine Therapy in Insured Black and White Breast Cancer Survivors: Exploring Adherence Measures in Patient Data.

Sheppard VB, He J, Sutton A, Cromwell L, Adunlin G, Salgado TM, Tolsma D, Trout M, Robinson BE, Edmonds MC, Bosworth HB, Tadesse MG.

J Manag Care Spec Pharm. 2019 May;25(5):578-586. doi: 10.18553/jmcp.2019.25.5.578.


A Modified Random Survival Forests Algorithm for High Dimensional Predictors and Self-Reported Outcomes.

Xu H, Gu X, Tadesse MG, Balasubramanian R.

J Comput Graph Stat. 2018;27(4):763-772. doi: 10.1080/10618600.2018.1474115. Epub 2018 Aug 20.


Low-Stress Mechanical Property Study of Various Functional Fabrics for Tactile Property Evaluation.

Tadesse MG, Nagy L, Nierstrasz V, Loghin C, Chen Y, Wang L.

Materials (Basel). 2018 Dec 5;11(12). pii: E2466. doi: 10.3390/ma11122466.


Physical activity and epigenetic biomarkers in maternal blood during pregnancy.

Badon SE, Littman AJ, Chan KCG, Tadesse MG, Stapleton PL, Bammler TK, Sorensen TK, Williams MA, Enquobahrie DA.

Epigenomics. 2018 Nov;10(11):1383-1395. doi: 10.2217/epi-2017-0169. Epub 2018 Oct 16.


Identification of race-associated metabolite biomarkers for hepatocellular carcinoma in patients with liver cirrhosis and hepatitis C virus infection.

Di Poto C, He S, Varghese RS, Zhao Y, Ferrarini A, Su S, Karabala A, Redi M, Mamo H, Rangnekar AS, Fishbein TM, Kroemer AH, Tadesse MG, Roy R, Sherif ZA, Kumar D, Ressom HW.

PLoS One. 2018 Mar 14;13(3):e0192748. doi: 10.1371/journal.pone.0192748. eCollection 2018.


Initiation of Adjuvant Endocrine Therapy in Black and White Women With Breast Cancer.

Sheppard VB, de Mendoza AH, He J, Jennings Y, Edmonds MC, Oppong BA, Tadesse MG.

Clin Breast Cancer. 2018 Oct;18(5):337-346.e1. doi: 10.1016/j.clbc.2017.12.002. Epub 2017 Dec 12.


Metabolomics signatures associated with an oral glucose challenge in pregnant women.

Gelaye B, Clish CB, Denis M, Larrabure G, Tadesse MG, Deik A, Pierce K, Bullock K, Dennis C, Enquobahrie DA, Williams MA.

Diabetes Metab. 2019 Jan;45(1):39-46. doi: 10.1016/j.diabet.2018.01.004. Epub 2018 Jan 11.


A pilot study of routine immunization data quality in Bunza Local Government area: causes and possible remedies.

Omoleke SA, Tadesse MG.

Pan Afr Med J. 2017 Aug 2;27:239. doi: 10.11604/pamj.2017.27.239.11875. eCollection 2017.


Circulating early- and mid-pregnancy microRNAs and risk of gestational diabetes.

Wander PL, Boyko EJ, Hevner K, Parikh VJ, Tadesse MG, Sorensen TK, Williams MA, Enquobahrie DA.

Diabetes Res Clin Pract. 2017 Oct;132:1-9. doi: 10.1016/j.diabres.2017.07.024. Epub 2017 Jul 25.


Multi-omic approaches for characterization of hepatocellular carcinoma.

Ressom HW, Di Poto C, Ferrarini A, Yunli Hu, Nezami Ranjbar MR, Ehwang Song, Varghese RS, Minkun Wang, Shiyue Zhou, Rui Zhu, Yiming Zuo, Tadesse MG, Mechref Y.

Conf Proc IEEE Eng Med Biol Soc. 2016 Aug;2016:3437-3440. doi: 10.1109/EMBC.2016.7591467.


Metabolomic Characterization of Hepatocellular Carcinoma in Patients with Liver Cirrhosis for Biomarker Discovery.

Di Poto C, Ferrarini A, Zhao Y, Varghese RS, Tu C, Zuo Y, Wang M, Nezami Ranjbar MR, Luo Y, Zhang C, Desai CS, Shetty K, Tadesse MG, Ressom HW.

Cancer Epidemiol Biomarkers Prev. 2017 May;26(5):675-683. doi: 10.1158/1055-9965.EPI-16-0366. Epub 2016 Dec 2.


Genetic variations related to maternal whole blood mitochondrial DNA copy number: a genome-wide and candidate gene study.

Workalemahu T, Enquobahrie DA, Tadesse MG, Hevner K, Gelaye B, Sanchez SE, Williams MA.

J Matern Fetal Neonatal Med. 2017 Oct;30(20):2433-2439. doi: 10.1080/14767058.2016.1252747. Epub 2017 Apr 4.


Maternal pre-pregnancy body mass index and circulating microRNAs in pregnancy.

Enquobahrie DA, Wander PL, Tadesse MG, Qiu C, Holzman C, Williams MA.

Obes Res Clin Pract. 2017 Jul - Aug;11(4):464-474. doi: 10.1016/j.orcp.2016.10.287. Epub 2016 Oct 24.


Multivariate Bayesian variable selection exploiting dependence structure among outcomes: Application to air pollution effects on DNA methylation.

Lee KH, Tadesse MG, Baccarelli AA, Schwartz J, Coull BA.

Biometrics. 2017 Mar;73(1):232-241. doi: 10.1111/biom.12557. Epub 2016 Jul 5.


Placental genetic variations in circadian clock-related genes increase the risk of placental abruption.

Qiu C, Gelaye B, Denis M, Tadesse MG, Enquobahrie DA, Ananth CV, Pacora PN, Salazar M, Sanchez SE, Williams MA.

Int J Mol Epidemiol Genet. 2016 Mar 23;7(1):32-40. eCollection 2016.


Risk of Common Mental Disorders in Relation to Symptoms of Obstructive Sleep Apnea Syndrome among Ethiopian College Students.

Rutagarama O, Gelaye B, Tadesse MG, Lemma S, Berhane Y, Williams MA.

J Sleep Disord Treat Care. 2015;4(3). doi: 10.4172/2325-9639.1000161. Epub 2015 Oct 20.


Assessment of GC-MS in Detecting Changes in the Levels of Metabolites Using a Spike-in Experiment in Human Plasma.

Varghese RS, Poto CD, Tu C, Ranjbar MRN, Luo Y, Choi J, Tadesse MG, Ressom HW.

Metabolomics (Los Angel). 2016;6(2). pii: 175. doi: 10.4172/2153-0769.1000175. Epub 2016 Jun 3.


Evaluation of hierarchical models for integrative genomic analyses.

Denis M, Tadesse MG.

Bioinformatics. 2016 Mar 1;32(5):738-46. doi: 10.1093/bioinformatics/btv653. Epub 2015 Nov 5.


Circadian clock-related genetic risk scores and risk of placental abruption.

Qiu C, Gelaye B, Denis M, Tadesse MG, Luque Fernandez MA, Enquobahrie DA, Ananth CV, Sanchez SE, Williams MA.

Placenta. 2015 Dec;36(12):1480-6. doi: 10.1016/j.placenta.2015.10.005. Epub 2015 Oct 23.


Candidate Gene and MicroRNA Expression in Fetal Membranes and Preterm Delivery Risk.

Enquobahrie DA, Hensley M, Qiu C, Abetew DF, Hevner K, Tadesse MG, Williams MA.

Reprod Sci. 2016 Jun;23(6):731-7. doi: 10.1177/1933719115612925. Epub 2015 Oct 27.


Maternal Early Pregnancy Serum Metabolites and Risk of Gestational Diabetes Mellitus.

Enquobahrie DA, Denis M, Tadesse MG, Gelaye B, Ressom HW, Williams MA.

J Clin Endocrinol Metab. 2015 Nov;100(11):4348-56. doi: 10.1210/jc.2015-2862. Epub 2015 Sep 25.


Bayesian Normalization Model for Label-Free Quantitative Analysis by LC-MS.

Ranjbar MR, Tadesse MG, Wang Y, Ressom HW.

IEEE/ACM Trans Comput Biol Bioinform. 2015 Jul-Aug;12(4):914-27. doi: 10.1109/TCBB.2014.2377723.


Psychometric properties and factor structure of the General Health Questionnaire as a screening tool for anxiety and depressive symptoms in a multi-national study of young adults.

Gelaye B, Tadesse MG, Lohsoonthorn V, Lertmeharit S, Pensuksan WC, Sanchez SE, Lemma S, Berhane Y, Vélez JC, Barbosa C, Anderade A, Williams MA.

J Affect Disord. 2015 Nov 15;187:197-202. doi: 10.1016/j.jad.2015.08.045. Epub 2015 Aug 28.


GC-MS Based Plasma Metabolomics for Identification of Candidate Biomarkers for Hepatocellular Carcinoma in Egyptian Cohort.

Nezami Ranjbar MR, Luo Y, Di Poto C, Varghese RS, Ferrarini A, Zhang C, Sarhan NI, Soliman H, Tadesse MG, Ziada DH, Roy R, Ressom HW.

PLoS One. 2015 Jun 1;10(6):e0127299. doi: 10.1371/journal.pone.0127299. eCollection 2015.


Sleep disturbances and quality of life in Sub-Saharan African migraineurs.

Morgan I, Eguia F, Gelaye B, Peterlin BL, Tadesse MG, Lemma S, Berhane Y, Williams MA.

J Headache Pain. 2015 Mar 4;16:18. doi: 10.1186/s10194-015-0504-x.


LC-MS/MS-based serum proteomics for identification of candidate biomarkers for hepatocellular carcinoma.

Tsai TH, Song E, Zhu R, Di Poto C, Wang M, Luo Y, Varghese RS, Tadesse MG, Ziada DH, Desai CS, Shetty K, Mechref Y, Ressom HW.

Proteomics. 2015 Jul;15(13):2369-81. doi: 10.1002/pmic.201400364. Epub 2015 Apr 29.


Early Pregnancy Maternal Blood DNA Methylation in Repeat Pregnancies and Change in Gestational Diabetes Mellitus Status—A Pilot Study.

Enquobahrie DA, Moore A, Muhie S, Tadesse MG, Lin S, Williams MA.

Reprod Sci. 2015 Jul;22(7):904-10. doi: 10.1177/1933719115570903. Epub 2015 Feb 11.


Pathway and network approaches for identification of cancer signature markers from omics data.

Wang J, Zuo Y, Man YG, Avital I, Stojadinovic A, Liu M, Yang X, Varghese RS, Tadesse MG, Ressom HW.

J Cancer. 2015 Jan 1;6(1):54-65. doi: 10.7150/jca.10631. eCollection 2015. Review.


Construct validity and factor structure of the pittsburgh sleep quality index and epworth sleepiness scale in a multi-national study of African, South East Asian and South American college students.

Gelaye B, Lohsoonthorn V, Lertmeharit S, Pensuksan WC, Sanchez SE, Lemma S, Berhane Y, Zhu X, Vélez JC, Barbosa C, Anderade A, Tadesse MG, Williams MA.

PLoS One. 2014 Dec 31;9(12):e116383. doi: 10.1371/journal.pone.0116383. eCollection 2014.


Placental genome and maternal-placental genetic interactions: a genome-wide and candidate gene association study of placental abruption.

Denis M, Enquobahrie DA, Tadesse MG, Gelaye B, Sanchez SE, Salazar M, Ananth CV, Williams MA.

PLoS One. 2014 Dec 30;9(12):e116346. doi: 10.1371/journal.pone.0116346. eCollection 2014.


Daytime Sleepiness, Circadian Preference, Caffeine Consumption and Use of Other Stimulants among Thai College Students.

Tran J, Lertmaharit S, Lohsoonthorn V, Pensuksan WC, Rattananupong T, Tadesse MG, Gelaye B, Williams MA.

J Public Health Epidemiol. 2014 Jun;8(6):202-210.


LC-MS profiling of N-Glycans derived from human serum samples for biomarker discovery in hepatocellular carcinoma.

Tsai TH, Wang M, Di Poto C, Hu Y, Zhou S, Zhao Y, Varghese RS, Luo Y, Tadesse MG, Ziada DH, Desai CS, Shetty K, Mechref Y, Ressom HW.

J Proteome Res. 2014 Nov 7;13(11):4859-68. doi: 10.1021/pr500460k. Epub 2014 Aug 8.


Biological network inference using low order partial correlation.

Zuo Y, Yu G, Tadesse MG, Ressom HW.

Methods. 2014 Oct 1;69(3):266-73. doi: 10.1016/j.ymeth.2014.06.010. Epub 2014 Jul 5.


Assessing validity of a depression screening instrument in the absence of a gold standard.

Gelaye B, Tadesse MG, Williams MA, Fann JR, Vander Stoep A, Andrew Zhou XH.

Ann Epidemiol. 2014 Jul;24(7):527-31. doi: 10.1016/j.annepidem.2014.04.009. Epub 2014 May 2.



Cassese A, Guindani M, Tadesse MG, Falciani F, Vannucci M.

Ann Appl Stat. 2014 Mar 1;8(1):148-175.


Daytime Sleepiness, Circadian Preference, Caffeine Consumption and Khat Use among College Students in Ethiopia.

Robinson D, Gelaye B, Tadesse MG, Williams MA, Lemma S, Berhane Y.

J Sleep Disord Treat Care. 2013 Dec 20;3(1). doi: 10.4172/2325-9639.1000130.


Identification of functional modules by integration of multiple data sources using a Bayesian network classifier.

Wang J, Zuo Y, Liu L, Man Y, Tadesse MG, Ressom HW.

Circ Cardiovasc Genet. 2014 Apr;7(2):206-17. doi: 10.1161/CIRCGENETICS.113.000087.


Circadian rhythm characteristics, poor sleep quality, daytime sleepiness and common psychiatric disorders among Thai college students.

Haregu A, Gelaye B, Pensuksan WC, Lohsoonthorn V, Lertmaharit S, Rattananupong T, Tadesse MG, Williams MA.

Asia Pac Psychiatry. 2015 Jun;7(2):182-9. doi: 10.1111/appy.12127. Epub 2014 Mar 25.


Gaussian process regression model for normalization of LC-MS data using scan-level information.

Nezami Ranjbar MR, Zhao Y, Tadesse MG, Wang Y, Ressom HW.

Proteome Sci. 2013 Nov 7;11(Suppl 1):S13. doi: 10.1186/1477-5956-11-S1-S13. Epub 2013 Nov 7.


Pharmacogenomic characterization of gemcitabine response--a framework for data integration to enable personalized medicine.

Harris M, Bhuvaneshwar K, Natarajan T, Sheahan L, Wang D, Tadesse MG, Shoulson I, Filice R, Steadman K, Pishvaian MJ, Madhavan S, Deeken J.

Pharmacogenet Genomics. 2014 Feb;24(2):81-93. doi: 10.1097/FPC.0000000000000015. Erratum in: Pharmacogenet Genomics. 2014 Jun;24(6):329.


Evaluation of metabolite biomarkers for hepatocellular carcinoma through stratified analysis by gender, race, and alcoholic cirrhosis.

Xiao J, Zhao Y, Varghese RS, Zhou B, Di Poto C, Zhang L, Tadesse MG, Ziada DH, Shetty K, Ressom HW.

Cancer Epidemiol Biomarkers Prev. 2014 Jan;23(1):64-72. doi: 10.1158/1055-9965.EPI-13-0327. Epub 2013 Nov 1.


Multi-profile Bayesian alignment model for LC-MS data analysis with integration of internal standards.

Tsai TH, Tadesse MG, Di Poto C, Pannell LK, Mechref Y, Wang Y, Ressom HW.

Bioinformatics. 2013 Nov 1;29(21):2774-80. doi: 10.1093/bioinformatics/btt461. Epub 2013 Sep 6.


Profile-Based LC-MS data alignment--a Bayesian approach.

Tsai TH, Tadesse MG, Wang Y, Ressom HW.

IEEE/ACM Trans Comput Biol Bioinform. 2013 Mar-Apr;10(2):494-503. doi: 10.1109/TCBB.2013.25.


A regularization corrected score method for nonlinear regression models with covariate error.

Zucker DM, Gorfine M, Li Y, Tadesse MG, Spiegelman D.

Biometrics. 2013 Mar;69(1):80-90. doi: 10.1111/j.1541-0420.2012.01833.x. Epub 2013 Feb 4.


Sleep quality and sleep patterns in relation to consumption of energy drinks, caffeinated beverages, and other stimulants among Thai college students.

Lohsoonthorn V, Khidir H, Casillas G, Lertmaharit S, Tadesse MG, Pensuksan WC, Rattananupong T, Gelaye B, Williams MA.

Sleep Breath. 2013 Sep;17(3):1017-28. doi: 10.1007/s11325-012-0792-1. Epub 2012 Dec 14.


LC-MS based serum metabolomics for identification of hepatocellular carcinoma biomarkers in Egyptian cohort.

Xiao JF, Varghese RS, Zhou B, Nezami Ranjbar MR, Zhao Y, Tsai TH, Di Poto C, Wang J, Goerlitz D, Luo Y, Cheema AK, Sarhan N, Soliman H, Tadesse MG, Ziada DH, Ressom HW.

J Proteome Res. 2012 Dec 7;11(12):5914-23. doi: 10.1021/pr300673x. Epub 2012 Nov 1.


Utilization of metabolomics to identify serum biomarkers for hepatocellular carcinoma in patients with liver cirrhosis.

Ressom HW, Xiao JF, Tuli L, Varghese RS, Zhou B, Tsai TH, Ranjbar MR, Zhao Y, Wang J, Di Poto C, Cheema AK, Tadesse MG, Goldman R, Shetty K.

Anal Chim Acta. 2012 Sep 19;743:90-100. doi: 10.1016/j.aca.2012.07.013. Epub 2012 Jul 20.


The Epidemiology of Sleep Quality, Sleep Patterns, Consumption of Caffeinated Beverages, and Khat Use among Ethiopian College Students.

Lemma S, Patel SV, Tarekegn YA, Tadesse MG, Berhane Y, Gelaye B, Williams MA.

Sleep Disord. 2012;2012:583510. doi: 10.1155/2012/583510. Epub 2012 Nov 25.



Stingo FC, Chen YA, Tadesse MG, Vannucci M.

Ann Appl Stat. 2011 Sep 1;5(3):1978-2002.

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