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Structural Perturbations of Rhodopseudomonas palustris Form II RuBisCO Mutant Enzymes That Affect CO2 Fixation.

Satagopan S, North JA, Arbing MA, Varaljay VA, Haines SN, Wildenthal JA, Byerly KM, Shin A, Tabita FR.

Biochemistry. 2019 Sep 17;58(37):3880-3892. doi: 10.1021/acs.biochem.9b00617. Epub 2019 Sep 3.


Isotope discrimination by form IC RubisCO from Ralstonia eutropha and Rhodobacter sphaeroides, metabolically versatile members of 'Proteobacteria' from aquatic and soil habitats.

Thomas PJ, Boller AJ, Satagopan S, Tabita FR, Cavanaugh CM, Scott KM.

Environ Microbiol. 2019 Jan;21(1):72-80. doi: 10.1111/1462-2920.14423. Epub 2018 Nov 21.


Two Distinct Aerobic Methionine Salvage Pathways Generate Volatile Methanethiol in Rhodopseudomonas palustris.

Miller AR, North JA, Wildenthal JA, Tabita FR.

MBio. 2018 Apr 10;9(2). pii: e00407-18. doi: 10.1128/mBio.00407-18.


Microbial pathway for anaerobic 5'-methylthioadenosine metabolism coupled to ethylene formation.

North JA, Miller AR, Wildenthal JA, Young SJ, Tabita FR.

Proc Natl Acad Sci U S A. 2017 Nov 28;114(48):E10455-E10464. doi: 10.1073/pnas.1711625114. Epub 2017 Nov 13.


The Arnon-Buchanan cycle: a retrospective, 1966-2016.

Buchanan BB, Sirevåg R, Fuchs G, Ivanovsky RN, Igarashi Y, Ishii M, Tabita FR, Berg IA.

Photosynth Res. 2017 Nov;134(2):117-131. doi: 10.1007/s11120-017-0429-0. Epub 2017 Oct 10.


Synthetic CO2-fixation enzyme cascades immobilized on self-assembled nanostructures that enhance CO2/O2 selectivity of RubisCO.

Satagopan S, Sun Y, Parquette JR, Tabita FR.

Biotechnol Biofuels. 2017 Jul 6;10:175. doi: 10.1186/s13068-017-0861-6. eCollection 2017.


RubisCO of a nucleoside pathway known from Archaea is found in diverse uncultivated phyla in bacteria.

Wrighton KC, Castelle CJ, Varaljay VA, Satagopan S, Brown CT, Wilkins MJ, Thomas BC, Sharon I, Williams KH, Tabita FR, Banfield JF.

ISME J. 2016 Nov;10(11):2702-2714. doi: 10.1038/ismej.2016.53. Epub 2016 May 3.


Metabolic Regulation as a Consequence of Anaerobic 5-Methylthioadenosine Recycling in Rhodospirillum rubrum.

North JA, Sriram J, Chourey K, Ecker CD, Sharma R, Wildenthal JA, Hettich RL, Tabita FR.

MBio. 2016 Jul 12;7(4). pii: e00855-16. doi: 10.1128/mBio.00855-16.


RubisCO selection using the vigorously aerobic and metabolically versatile bacterium Ralstonia eutropha.

Satagopan S, Tabita FR.

FEBS J. 2016 Aug;283(15):2869-80. doi: 10.1111/febs.13774. Epub 2016 Jun 27.


Functional metagenomic selection of ribulose 1, 5-bisphosphate carboxylase/oxygenase from uncultivated bacteria.

Varaljay VA, Satagopan S, North JA, Witte B, Dourado MN, Anantharaman K, Arbing MA, Hoeft McCann S, Oremland RS, Banfield JF, Wrighton KC, Tabita FR.

Environ Microbiol. 2016 Apr;18(4):1187-99. doi: 10.1111/1462-2920.13138. Epub 2016 Jan 21.


CbbR, the Master Regulator for Microbial Carbon Dioxide Fixation.

Dangel AW, Tabita FR.

J Bacteriol. 2015 Nov;197(22):3488-98. doi: 10.1128/JB.00442-15. Epub 2015 Aug 31. Review.


Phosphoribulokinase mediates nitrogenase-induced carbon dioxide fixation gene repression in Rhodobacter sphaeroides.

Farmer RM, Tabita FR.

Microbiology. 2015 Nov;161(11):2184-91. doi: 10.1099/mic.0.000160. Epub 2015 Aug 24.


Amino acid residues of RegA important for interactions with the CbbR-DNA complex of Rhodobacter sphaeroides.

Dangel AW, Luther A, Tabita FR.

J Bacteriol. 2014 Sep;196(17):3179-90. doi: 10.1128/JB.01842-14. Epub 2014 Jun 23.


Structure-function studies with the unique hexameric form II ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) from Rhodopseudomonas palustris.

Satagopan S, Chan S, Perry LJ, Tabita FR.

J Biol Chem. 2014 Aug 1;289(31):21433-50. doi: 10.1074/jbc.M114.578625. Epub 2014 Jun 18.


Altered residues in key proteins influence the expression and activity of the nitrogenase complex in an adaptive CO2 fixation-deficient mutant strain of Rhodobacter sphaeroides.

Farmer RM, Laguna R, Panescu J, McCoy A, Logsdon B, Zianni M, Moskvin OV, Gomelsky M, Tabita FR.

Microbiology. 2014 Jan;160(Pt 1):198-208. doi: 10.1099/mic.0.073031-0. Epub 2013 Oct 14.


Regulatory twist and synergistic role of metabolic coinducer- and response regulator-mediated CbbR-cbbI interactions in Rhodopseudomonas palustris CGA010.

Joshi GS, Zianni M, Bobst CE, Tabita FR.

J Bacteriol. 2013 Apr;195(7):1381-8. doi: 10.1128/JB.02060-12. Epub 2013 Jan 4.


Mechanistic diversity in the RuBisCO superfamily: RuBisCO from Rhodospirillum rubrum is not promiscuous for reactions catalyzed by RuBisCO-like proteins.

Warlick BP, Imker HJ, Sriram J, Tabita FR, Gerlt JA.

Biochemistry. 2012 Nov 27;51(47):9470-9. doi: 10.1021/bi301311t. Epub 2012 Nov 14.


A RubisCO-like protein links SAM metabolism with isoprenoid biosynthesis.

Erb TJ, Evans BS, Cho K, Warlick BP, Sriram J, Wood BM, Imker HJ, Sweedler JV, Tabita FR, Gerlt JA.

Nat Chem Biol. 2012 Nov;8(11):926-32. doi: 10.1038/nchembio.1087. Epub 2012 Oct 7.


1-methylthio-D-xylulose 5-phosphate methylsulfurylase: a novel route to 1-deoxy-D-xylulose 5-phosphate in Rhodospirillum rubrum.

Warlick BP, Evans BS, Erb TJ, Ramagopal UA, Sriram J, Imker HJ, Sauder JM, Bonanno JB, Burley SK, Tabita FR, Almo SC, Sweedler JS, Gerlt JA.

Biochemistry. 2012 Oct 23;51(42):8324-6. doi: 10.1021/bi301215g. Epub 2012 Oct 8.


Further unraveling the regulatory twist by elucidating metabolic coinducer-mediated CbbR-cbbI promoter interactions in Rhodopseudomonas palustris CGA010.

Joshi GS, Zianni M, Bobst CE, Tabita FR.

J Bacteriol. 2012 Mar;194(6):1350-60. doi: 10.1128/JB.06418-11. Epub 2012 Jan 13.


Unravelling the regulatory twist--regulation of CO2 fixation in Rhodopseudomonas palustris CGA010 mediated by atypical response regulator(s).

Joshi GS, Bobst CE, Tabita FR.

Mol Microbiol. 2011 May;80(3):756-71. doi: 10.1111/j.1365-2958.2011.07606.x. Epub 2011 Mar 17.


Redox homeostasis phenotypes in RubisCO-deficient Rhodobacter sphaeroides via ensemble modeling.

Rizk ML, Laguna R, Smith KM, Tabita FR, Liao JC.

Biotechnol Prog. 2011 Jan-Feb;27(1):15-22. doi: 10.1002/btpr.506. Epub 2010 Oct 11.


Integrative control of carbon, nitrogen, hydrogen, and sulfur metabolism: the central role of the Calvin-Benson-Bassham cycle.

Laguna R, Joshi GS, Dangel AW, Luther AK, Tabita FR.

Adv Exp Med Biol. 2010;675:265-71. doi: 10.1007/978-1-4419-1528-3_15.


Functional prokaryotic RubisCO from an oceanic metagenomic library.

Witte B, John D, Wawrik B, Paul JH, Dayan D, Tabita FR.

Appl Environ Microbiol. 2010 May;76(9):2997-3003. doi: 10.1128/AEM.02661-09. Epub 2010 Mar 12.


Roles of RubisCO and the RubisCO-like protein in 5-methylthioadenosine metabolism in the Nonsulfur purple bacterium Rhodospirillum rubrum.

Singh J, Tabita FR.

J Bacteriol. 2010 Mar;192(5):1324-31. doi: 10.1128/JB.01442-09. Epub 2009 Dec 28.


The hydroxypropionate pathway of CO2 fixation: Fait accompli.

Tabita FR.

Proc Natl Acad Sci U S A. 2009 Dec 15;106(50):21015-6. doi: 10.1073/pnas.0912486107. Epub 2009 Dec 8. No abstract available.


A Rubisco mutant that confers growth under a normally "inhibitory" oxygen concentration.

Satagopan S, Scott SS, Smith TG, Tabita FR.

Biochemistry. 2009 Sep 29;48(38):9076-83. doi: 10.1021/bi9006385.


Differential accumulation of form I RubisCO in Rhodopseudomonas palustris CGA010 under Photoheterotrophic growth conditions with reduced carbon sources.

Joshi GS, Romagnoli S, Verberkmoes NC, Hettich RL, Pelletier D, Tabita FR.

J Bacteriol. 2009 Jul;191(13):4243-50. doi: 10.1128/JB.01795-08. Epub 2009 Apr 17.


Ecophysiology of "Halarsenatibacter silvermanii" strain SLAS-1T, gen. nov., sp. nov., a facultative chemoautotrophic arsenate respirer from salt-saturated Searles Lake, California.

Blum JS, Han S, Lanoil B, Saltikov C, Witte B, Tabita FR, Langley S, Beveridge TJ, Jahnke L, Oremland RS.

Appl Environ Microbiol. 2009 Apr;75(7):1950-60. doi: 10.1128/AEM.02614-08. Epub 2009 Feb 13. Erratum in: Appl Environ Microbiol. 2009 Aug;75(16):5437.


Protein-protein interactions between CbbR and RegA (PrrA), transcriptional regulators of the cbb operons of Rhodobacter sphaeroides.

Dangel AW, Tabita FR.

Mol Microbiol. 2009 Feb;71(3):717-29. doi: 10.1111/j.1365-2958.2008.06558.x. Epub 2008 Dec 8.


Mechanistic diversity in the RuBisCO superfamily: a novel isomerization reaction catalyzed by the RuBisCO-like protein from Rhodospirillum rubrum.

Imker HJ, Singh J, Warlick BP, Tabita FR, Gerlt JA.

Biochemistry. 2008 Oct 28;47(43):11171-3. doi: 10.1021/bi801685f. Epub 2008 Oct 1.


Phylogenetic and evolutionary relationships of RubisCO and the RubisCO-like proteins and the functional lessons provided by diverse molecular forms.

Tabita FR, Hanson TE, Satagopan S, Witte BH, Kreel NE.

Philos Trans R Soc Lond B Biol Sci. 2008 Aug 27;363(1504):2629-40. doi: 10.1098/rstb.2008.0023. Review.


Distinct form I, II, III, and IV Rubisco proteins from the three kingdoms of life provide clues about Rubisco evolution and structure/function relationships.

Tabita FR, Satagopan S, Hanson TE, Kreel NE, Scott SS.

J Exp Bot. 2008;59(7):1515-24. doi: 10.1093/jxb/erm361. Epub 2008 Feb 16. Review.


Function, structure, and evolution of the RubisCO-like proteins and their RubisCO homologs.

Tabita FR, Hanson TE, Li H, Satagopan S, Singh J, Chan S.

Microbiol Mol Biol Rev. 2007 Dec;71(4):576-99. Review.


Phytoplankton carbon fixation gene (RuBisCO) transcripts and air-sea CO(2) flux in the Mississippi River plume.

John DE, Wang ZA, Liu X, Byrne RH, Corredor JE, López JM, Cabrera A, Bronk DA, Tabita FR, Paul JH.

ISME J. 2007 Oct;1(6):517-31. Epub 2007 Aug 30.


Rubisco: the enzyme that keeps on giving.

Tabita FR.

Cell. 2007 Jun 15;129(6):1039-40.


Alkalilimnicola ehrlichii sp. nov., a novel, arsenite-oxidizing haloalkaliphilic gammaproteobacterium capable of chemoautotrophic or heterotrophic growth with nitrate or oxygen as the electron acceptor.

Hoeft SE, Blum JS, Stolz JF, Tabita FR, Witte B, King GM, Santini JM, Oremland RS.

Int J Syst Evol Microbiol. 2007 Mar;57(Pt 3):504-12.


Determination and comparison of the baseline proteomes of the versatile microbe Rhodopseudomonas palustris under its major metabolic states.

VerBerkmoes NC, Shah MB, Lankford PK, Pelletier DA, Strader MB, Tabb DL, McDonald WH, Barton JW, Hurst GB, Hauser L, Davison BH, Beatty JT, Harwood CS, Tabita FR, Hettich RL, Larimer FW.

J Proteome Res. 2006 Feb;5(2):287-98.


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