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Preexisting Autoimmune Disease: Implications for Immune Checkpoint Inhibitor Therapy in Solid Tumors.

Kennedy LC, Bhatia S, Thompson JA, Grivas P.

J Natl Compr Canc Netw. 2019 Jun 1;17(6):750-757. doi: 10.6004/jnccn.2019.7310. Review.


Current Applications of Diffusion Tensor Imaging and Tractography in Intracranial Tumor Resection.

Costabile JD, Alaswad E, D'Souza S, Thompson JA, Ormond DR.

Front Oncol. 2019 May 29;9:426. doi: 10.3389/fonc.2019.00426. eCollection 2019. Review.


Adverse effects of immune-checkpoint inhibitors: epidemiology, management and surveillance.

Martins F, Sofiya L, Sykiotis GP, Lamine F, Maillard M, Fraga M, Shabafrouz K, Ribi C, Cairoli A, Guex-Crosier Y, Kuntzer T, Michielin O, Peters S, Coukos G, Spertini F, Thompson JA, Obeid M.

Nat Rev Clin Oncol. 2019 May 15. doi: 10.1038/s41571-019-0218-0. [Epub ahead of print] Review.


Generation of an induced pluripotent stem cell line from a patient with retinitis pigmentosa caused by RP1 mutation.

Zhang X, Moon SY, Zhang D, Chen SC, Lamey T, Thompson JA, McLaren T, De Roach JN, McLenachan S, Chen FK.

Stem Cell Res. 2019 May;37:101452. doi: 10.1016/j.scr.2019.101452. Epub 2019 Apr 25.


pwrEWAS: a user-friendly tool for comprehensive power estimation for epigenome wide association studies (EWAS).

Graw S, Henn R, Thompson JA, Koestler DC.

BMC Bioinformatics. 2019 Apr 29;20(1):218. doi: 10.1186/s12859-019-2804-7.


Food animal veterinarians should seek a reevaluation of the ban on metronidazole.

Thompson JA.

J Am Vet Med Assoc. 2019 May 1;254(9):1042-1044. doi: 10.2460/javma.254.9.1042. No abstract available.


An evaluation of whether a gestational weight gain of 5 to 9 kg for obese women optimizes maternal and neonatal health risks.

Thompson AM, Thompson JA.

BMC Pregnancy Childbirth. 2019 Apr 11;19(1):126. doi: 10.1186/s12884-019-2273-z.


Cutaneous Melanoma, Version 2.2019, NCCN Clinical Practice Guidelines in Oncology.

Coit DG, Thompson JA, Albertini MR, Barker C, Carson WE, Contreras C, Daniels GA, DiMaio D, Fields RC, Fleming MD, Freeman M, Galan A, Gastman B, Guild V, Johnson D, Joseph RW, Lange JR, Nath S, Olszanski AJ, Ott P, Gupta AP, Ross MI, Salama AK, Skitzki J, Sosman J, Swetter SM, Tanabe KK, Wuthrick E, McMillian NR, Engh AM.

J Natl Compr Canc Netw. 2019 Apr 1;17(4):367-402. doi: 10.6004/jnccn.2019.0018.


A Quality Improvement Project to Increase Adherence to a Pain, Agitation, and Delirium Protocol in the Intensive Care Unit.

Yan W, Morgan BT, Berry P, Matthys MK, Thompson JA, Smallheer BA.

Dimens Crit Care Nurs. 2019 May/Jun;38(3):174-181. doi: 10.1097/DCC.0000000000000353.


Health Sciences Patron Preference for Library Spaces: A Multisite Observational Study.

Steigerwalt K, Fitterling L, Harvey M, McQueeny Kartsonis S, DeGeus M, Franco N, Thompson M, Sykes-Berry S, Mullaly-Quijas P, Thompson JA.

Med Ref Serv Q. 2019 Jan-Mar;38(1):1-21. doi: 10.1080/02763869.2018.1548890.


Analysis of Coronavirus Temperature-Sensitive Mutants Reveals an Interplay between the Macrodomain and Papain-Like Protease Impacting Replication and Pathogenesis.

Deng X, Mettelman RC, O'Brien A, Thompson JA, O'Brien TE, Baker SC.

J Virol. 2019 May 29;93(12). pii: e02140-18. doi: 10.1128/JVI.02140-18. Print 2019 Jun 15.


Generation of two induced pluripotent stem cell lines from a patient with compound heterozygous mutations in the USH2A gene.

McLenachan S, Wong EYM, Zhang X, Leith F, Moon SY, Zhang D, Chen SC, Thompson JA, McLaren T, Lamey T, De Roach JN, Atlas MD, Dilley RJ, Chen FK.

Stem Cell Res. 2019 Apr;36:101420. doi: 10.1016/j.scr.2019.101420. Epub 2019 Mar 16.


Management of Immunotherapy-Related Toxicities, Version 1.2019.

Thompson JA, Schneider BJ, Brahmer J, Andrews S, Armand P, Bhatia S, Budde LE, Costa L, Davies M, Dunnington D, Ernstoff MS, Frigault M, Hoffner B, Hoimes CJ, Lacouture M, Locke F, Lunning M, Mohindra NA, Naidoo J, Olszanski AJ, Oluwole O, Patel SP, Reddy S, Ryder M, Santomasso B, Shofer S, Sosman JA, Wahidi M, Wang Y, Johnson-Chilla A, Scavone JL.

J Natl Compr Canc Netw. 2019 Mar 1;17(3):255-289. doi: 10.6004/jnccn.2019.0013.


Preemptive Oral Acetaminophen for Women Undergoing Total Laparoscopic Hysterectomy.

Atkins JR, Titch JF, Norcross WP, Thompson JA, Muckler VC.

Nurs Womens Health. 2019 Apr;23(2):105-113. doi: 10.1016/j.nwh.2019.01.003. Epub 2019 Mar 1.


Pregnant women with opioid use disorder and their infants in three state Medicaid programs in 2013-2016.

Clemans-Cope L, Lynch V, Howell E, Hill I, Holla N, Morgan J, Johnson P, Cross-Barnet C, Thompson JA.

Drug Alcohol Depend. 2019 Feb 1;195:156-163. doi: 10.1016/j.drugalcdep.2018.12.005. Epub 2019 Jan 3.


Disease Tolerance as an Inherent Component of Immunity.

Martins R, Carlos AR, Braza F, Thompson JA, Bastos-Amador P, Ramos S, Soares MP.

Annu Rev Immunol. 2019 Apr 26;37:405-437. doi: 10.1146/annurev-immunol-042718-041739. Epub 2019 Jan 23.


Interleaving Stimulation in Parkinson's Disease, Tremor, and Dystonia.

Kern DS, Picillo M, Thompson JA, Sammartino F, di Biase L, Munhoz RP, Fasano A.

Stereotact Funct Neurosurg. 2018;96(6):379-391. doi: 10.1159/000494983. Epub 2019 Jan 17.


Generation of the induced pluripotent stem cell line from a patient with autosomal recessive ABCA4-mediated Stargardt Macular Dystrophy.

Claassen JN, Zhang D, Chen SC, Moon SY, Lamey T, Thompson JA, McLaren T, De Roach JN, McLenachan S, Chen FK.

Stem Cell Res. 2019 Jan;34:101352. doi: 10.1016/j.scr.2018.11.013. Epub 2018 Nov 30.


A phase 1 trial of SGN-CD70A in patients with CD70-positive, metastatic renal cell carcinoma.

Pal SK, Forero-Torres A, Thompson JA, Morris JC, Chhabra S, Hoimes CJ, Vogelzang NJ, Boyd T, Bergerot PG, Adashek JJ, Li H, Yu X, Gartner EM, Carret AS, Smith DC.

Cancer. 2019 Apr 1;125(7):1124-1132. doi: 10.1002/cncr.31912. Epub 2019 Jan 9.


New therapeutic perspectives to manage refractory immune checkpoint-related toxicities.

Martins F, Sykiotis GP, Maillard M, Fraga M, Ribi C, Kuntzer T, Michielin O, Peters S, Coukos G, Spertini F, Thompson JA, Obeid M.

Lancet Oncol. 2019 Jan;20(1):e54-e64. doi: 10.1016/S1470-2045(18)30828-3.


Generation of two induced pluripotent stem cell lines from a patient with dominant PRPF31 mutation and a related non-penetrant carrier.

McLenachan S, Zhang D, Zhang X, Chen SC, Lamey T, Thompson JA, McLaren T, De Roach JN, Fletcher S, Chen FK.

Stem Cell Res. 2019 Jan;34:101357. doi: 10.1016/j.scr.2018.11.018. Epub 2018 Dec 10.


Sleep safe in clean hands: Improving hand hygiene compliance in the operating room through education and increased access to hand hygiene products.

Paul ET, Kuszajewski M, Davenport A, Thompson JA, Morgan B.

Am J Infect Control. 2019 May;47(5):504-508. doi: 10.1016/j.ajic.2018.10.021. Epub 2018 Dec 12.


Inferring sleep stage from local field potentials recorded in the subthalamic nucleus of Parkinson's patients.

Christensen E, Abosch A, Thompson JA, Zylberberg J.

J Sleep Res. 2019 Aug;28(4):e12806. doi: 10.1111/jsr.12806. Epub 2018 Dec 13.


Doulas in the Operating Room: An Innovative Approach to Supporting Skin-to-Skin Care During Cesarean Birth.

Lanning RK, Oermann MH, Waldrop J, Brown LG, Thompson JA.

J Midwifery Womens Health. 2019 Jan;64(1):112-117. doi: 10.1111/jmwh.12930. Epub 2018 Dec 12.


Enhancing the Quality of the Anesthesia to Postanesthesia Care Unit Patient Transfer Through Use of an Electronic Medical Record-Based Handoff Tool.

Halladay ML, Thompson JA, Vacchiano CA.

J Perianesth Nurs. 2019 Jun;34(3):622-632. doi: 10.1016/j.jopan.2018.09.002. Epub 2018 Dec 6.


Effect of intra-ovarian injection of mesenchymal stem cells in aged mares.

Grady ST, Watts AE, Thompson JA, Penedo MCT, Konganti K, Hinrichs K.

J Assist Reprod Genet. 2019 Mar;36(3):543-556. doi: 10.1007/s10815-018-1371-6. Epub 2018 Nov 23.


Programming of Vascular Dysfunction in the Intrauterine Milieu of Diabetic Pregnancies.

Sallam NA, Palmgren VAC, Singh RD, John CM, Thompson JA.

Int J Mol Sci. 2018 Nov 20;19(11). pii: E3665. doi: 10.3390/ijms19113665. Review.


Clinical and molecular characterization of non-syndromic retinal dystrophy due to c.175G>A mutation in ceroid lipofuscinosis neuronal 3 (CLN3).

Chen FK, Zhang X, Eintracht J, Zhang D, Arunachalam S, Thompson JA, Chelva E, Mallon D, Chen SC, McLaren T, Lamey T, De Roach J, McLenachan S.

Doc Ophthalmol. 2019 Feb;138(1):55-70. doi: 10.1007/s10633-018-9665-7. Epub 2018 Nov 16.


Comparison of multi-wall carbon nanotube and nitrogen-doped multi-wall carbon nanotube effects on lung function and airway reactivity in rats.

Russ KA, Thompson JA, Kashon M, Porter DW, Friend SA, McKinney W, Fedan JS.

Toxicol Appl Pharmacol. 2019 Feb 1;364:153-163. doi: 10.1016/j.taap.2018.11.004. Epub 2018 Nov 10.


Reporting of stepped wedge cluster randomised trials: extension of the CONSORT 2010 statement with explanation and elaboration.

Hemming K, Taljaard M, McKenzie JE, Hooper R, Copas A, Thompson JA, Dixon-Woods M, Aldcroft A, Doussau A, Grayling M, Kristunas C, Goldstein CE, Campbell MK, Girling A, Eldridge S, Campbell MJ, Lilford RJ, Weijer C, Forbes AB, Grimshaw JM.

BMJ. 2018 Nov 9;363:k1614. doi: 10.1136/bmj.k1614. No abstract available.


Guidelines of care for the management of primary cutaneous melanoma.

Swetter SM, Tsao H, Bichakjian CK, Curiel-Lewandrowski C, Elder DE, Gershenwald JE, Guild V, Grant-Kels JM, Halpern AC, Johnson TM, Sober AJ, Thompson JA, Wisco OJ, Wyatt S, Hu S, Lamina T.

J Am Acad Dermatol. 2019 Jan;80(1):208-250. doi: 10.1016/j.jaad.2018.08.055. Epub 2018 Nov 1.


Method for localizing intraoperative recordings from deep brain stimulation surgery using post-operative structural MRI.

Winter M, Costabile JD, Abosch A, Thompson JA.

Neuroimage Clin. 2018;20:1123-1128. doi: 10.1016/j.nicl.2018.10.016. Epub 2018 Oct 16.


Association of MRI Measurements with Cognitive Outcomes After STN-DBS in Parkinson's Disease.

Weinkle LJ, Hoyt B, Thompson JA, Sillau S, Tanabe J, Honce J, Klepitskaya O.

Mov Disord Clin Pract. 2018 Jul 28;5(4):417-426. doi: 10.1002/mdc3.12643. eCollection 2018 Jul-Aug.


Constructing Kinetically Controlled Denaturation Isotherms of Folded Proteins Using Denaturant-Pulse Chaperonin Binding.

O'Neil PT, Machen AJ, Thompson JA, Wang W, Hoang QQ, Baldwin MR, Khar KR, Karanicolas J, Fisher MT.

Methods Mol Biol. 2019;1873:293-304. doi: 10.1007/978-1-4939-8820-4_19.


Salicylate toxicity after undetectable serum salicylate concentration: a retrospective cohort study.

Moss MJ, Fisher JA, Kenny TA, Palmer AC, Thompson JA, Wolfer H, Hendrickson RG.

Clin Toxicol (Phila). 2019 Feb;57(2):137-140. doi: 10.1080/15563650.2018.1502442. Epub 2018 Oct 11.


Broad, Multi-Year Sampling Effort Highlights Complex Dynamics of the Tick-Borne Pathogen Ehrlichia chaffeensis (Rickettsiales: Anaplasmatacae).

Simpson DT, Teague MS, Weeks JK, Lewis AD, D'Addio PM, Moore JD, Thompson JA, Harris AC, Cannella RT, Kaup BZ, Kerscher O, Leu M.

J Med Entomol. 2019 Jan 8;56(1):162-168. doi: 10.1093/jme/tjy171.


Chemoprevention agents for melanoma: A path forward into phase 3 clinical trials.

Jeter JM, Bowles TL, Curiel-Lewandrowski C, Swetter SM, Filipp FV, Abdel-Malek ZA, Geskin LJ, Brewer JD, Arbiser JL, Gershenwald JE, Chu EY, Kirkwood JM, Box NF, Funchain P, Fisher DE, Kendra KL, Marghoob AA, Chen SC, Ming ME, Albertini MR, Vetto JT, Margolin KA, Pagoto SL, Hay JL, Grossman D, Ellis DL, Kashani-Sabet M, Mangold AR, Markovic SN, Nelson KC, Powers JG, Robinson JK, Sahni D, Sekulic A, Sondak VK, Wei ML, Zager JS, Dellavalle RP, Thompson JA, Weinstock MA, Leachman SA, Cassidy PB.

Cancer. 2019 Jan 1;125(1):18-44. doi: 10.1002/cncr.31719. Epub 2018 Oct 3. Review. Erratum in: Cancer. 2019 Aug 1;125(15):2706.


Development of High-Throughput Clinical Testing of RPGR ORF15 Using a Large Inherited Retinal Dystrophy Cohort.

Chiang JPW, Lamey TM, Wang NK, Duan J, Zhou W, McLaren TL, Thompson JA, Ruddle J, De Roach JN.

Invest Ophthalmol Vis Sci. 2018 Sep 4;59(11):4434-4440. doi: 10.1167/iovs.18-24555.


Fatal enteric plexus neuropathy after one dose of ipilimumab plus nivolumab: a case report.

Appelbaum J, Wells D, Hiatt JB, Steinbach G, Stewart FM, Thomas H, Nghiem P, Kapur RP, Thompson JA, Bhatia S.

J Immunother Cancer. 2018 Aug 31;6(1):82. doi: 10.1186/s40425-018-0396-9.


Establishment of an induced pluripotent stem cell line from a retinitis pigmentosa patient with compound heterozygous CRB1 mutation.

Zhang X, Zhang D, Chen SC, Lamey T, Thompson JA, McLaren T, De Roach JN, Chen FK, McLenachan S.

Stem Cell Res. 2018 Aug;31:147-151. doi: 10.1016/j.scr.2018.08.001. Epub 2018 Aug 2.


Maternal uniparental isodisomy of chromosome 6 unmasks a novel variant in TULP1 in a patient with early onset retinal dystrophy.

Souzeau E, Thompson JA, McLaren TL, De Roach JN, Barnett CP, Lamey TM, Craig JE.

Mol Vis. 2018 Jul 21;24:478-484. eCollection 2018.


Pan-Cancer Analysis Reveals Differential Susceptibility of Bidirectional Gene Promoters to DNA Methylation, Somatic Mutations, and Copy Number Alterations.

Thompson JA, Christensen BC, Marsit CJ.

Int J Mol Sci. 2018 Aug 5;19(8). pii: E2296. doi: 10.3390/ijms19082296.


Evolution of Protease Inhibitor Resistance in Human Immunodeficiency Virus Type 1 Infected Patients Failing Protease Inhibitor Monotherapy as Second-line Therapy in Low-income Countries: An Observational Analysis Within the EARNEST Randomized Trial.

Thompson JA, Kityo C, Dunn D, Hoppe A, Ndashimye E, Hakim J, Kambugu A, van Oosterhout JJ, Arribas J, Mugyenyi P, Walker AS, Paton NI; Europe–Africa Research Network for Evaluation of Second-line Therapy (EARNEST) Trial Team .

Clin Infect Dis. 2019 Mar 19;68(7):1184-1192. doi: 10.1093/cid/ciy589.


Effects of multidisciplinary therapy on physical function in Huntington's disease.

Cruickshank TM, Reyes AP, Penailillo LE, Pulverenti T, Bartlett DM, Zaenker P, Blazevich AJ, Newton RU, Thompson JA, Lo J, Ziman MR.

Acta Neurol Scand. 2018 Dec;138(6):500-507. doi: 10.1111/ane.13002. Epub 2018 Jul 30.


Panniculitis in a patient with pathologic complete response to talimogene laherparepvec treatment for recurrent, in-transit melanoma.

Long TH, Shinohara MM, Argenyi ZB, Thompson JA, Gardner JM.

J Cutan Pathol. 2018 Nov;45(11):864-868. doi: 10.1111/cup.13332. Epub 2018 Aug 22.


Mortality and costs associated with alcoholic hepatitis: A claims analysis of a commercially insured population.

Thompson JA, Martinson N, Martinson M.

Alcohol. 2018 Sep;71:57-63. doi: 10.1016/j.alcohol.2018.02.003. Epub 2018 Mar 2.


Reply to D.L. Kimpel et al.

Suarez-Almazor ME, Thompson JA, Brahmer JR.

J Clin Oncol. 2018 Sep 10;36(26):2744. doi: 10.1200/JCO.2018.79.1798. Epub 2018 Jul 18. No abstract available.


Grain zinc concentrations differ among Brazilian wheat genotypes and respond to zinc and nitrogen supply.

Pascoalino JAL, Thompson JA, Wright G, Franco FA, Scheeren PL, Pauletti V, Moraes MF, White PJ.

PLoS One. 2018 Jul 10;13(7):e0199464. doi: 10.1371/journal.pone.0199464. eCollection 2018.


The lifelong impact of fetal growth restriction on cardiac development.

Masoumy EP, Sawyer AA, Sharma S, Patel JA, Gordon PMK, Regnault TRH, Matushewski B, Weintraub NL, Richardson B, Thompson JA, Stansfield BK.

Pediatr Res. 2018 Oct;84(4):537-544. doi: 10.1038/s41390-018-0069-x. Epub 2018 Jun 2.

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