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Items: 16

1.

Allele-specific RNA imaging shows that allelic imbalances can arise in tissues through transcriptional bursting.

Symmons O, Chang M, Mellis IA, Kalish JM, Park J, Suszták K, Bartolomei MS, Raj A.

PLoS Genet. 2019 Jan 9;15(1):e1007874. doi: 10.1371/journal.pgen.1007874. eCollection 2019 Jan.

2.

Amendments: Author Correction: ClampFISH detects individual nucleic acid molecules using click chemistry-based amplification.

Rouhanifard SH, Mellis IA, Dunagin M, Bayatpour S, Jiang CL, Dardani I, Symmons O, Emert B, Torre E, Cote A, Sullivan A, Stamatoyannopoulos JA, Raj A.

Nat Biotechnol. 2019 Jan 3;37(1):102. doi: 10.1038/nbt0119-102b. No abstract available.

PMID:
30605160
3.

ClampFISH detects individual nucleic acid molecules using click chemistry-based amplification.

Rouhanifard SH, Mellis IA, Dunagin M, Bayatpour S, Jiang CL, Dardani I, Symmons O, Emert B, Torre E, Cote A, Sullivan A, Stamatoyannopoulos JA, Raj A.

Nat Biotechnol. 2018 Nov 12. doi: 10.1038/nbt.4286. [Epub ahead of print]

4.

Signals from the brain and olfactory epithelium control shaping of the mammalian nasal capsule cartilage.

Kaucka M, Petersen J, Tesarova M, Szarowska B, Kastriti ME, Xie M, Kicheva A, Annusver K, Kasper M, Symmons O, Pan L, Spitz F, Kaiser J, Hovorakova M, Zikmund T, Sunadome K, Matise MP, Wang H, Marklund U, Abdo H, Ernfors P, Maire P, Wurmser M, Chagin AS, Fried K, Adameyko I.

Elife. 2018 Jun 13;7. pii: e34465. doi: 10.7554/eLife.34465.

5.

The Shh Topological Domain Facilitates the Action of Remote Enhancers by Reducing the Effects of Genomic Distances.

Symmons O, Pan L, Remeseiro S, Aktas T, Klein F, Huber W, Spitz F.

Dev Cell. 2016 Dec 5;39(5):529-543. doi: 10.1016/j.devcel.2016.10.015. Epub 2016 Nov 17.

6.

Erratum: Cis-regulatory architecture of a brain signaling center predates the origin of chordates.

Yao Y, Minor PJ, Zhao YT, Jeong Y, Pani AM, King AN, Symmons O, Gan L, Cardoso WV, Spitz F, Lowe CJ, Epstein DJ.

Nat Genet. 2016 Jul 27;48(8):970. doi: 10.1038/ng0816-970a. No abstract available.

PMID:
27463400
7.

What's Luck Got to Do with It: Single Cells, Multiple Fates, and Biological Nondeterminism.

Symmons O, Raj A.

Mol Cell. 2016 Jun 2;62(5):788-802. doi: 10.1016/j.molcel.2016.05.023. Review.

8.

Cis-regulatory architecture of a brain signaling center predates the origin of chordates.

Yao Y, Minor PJ, Zhao YT, Jeong Y, Pani AM, King AN, Symmons O, Gan L, Cardoso WV, Spitz F, Lowe CJ, Epstein DJ.

Nat Genet. 2016 May;48(5):575-80. doi: 10.1038/ng.3542. Epub 2016 Apr 11. Erratum in: Nat Genet. 2016 Jul 27;48(8):970.

9.

Functional and topological characteristics of mammalian regulatory domains.

Symmons O, Uslu VV, Tsujimura T, Ruf S, Nassari S, Schwarzer W, Ettwiller L, Spitz F.

Genome Res. 2014 Mar;24(3):390-400. doi: 10.1101/gr.163519.113. Epub 2014 Jan 7.

10.

From remote enhancers to gene regulation: charting the genome's regulatory landscapes.

Symmons O, Spitz F.

Philos Trans R Soc Lond B Biol Sci. 2013 May 6;368(1620):20120358. doi: 10.1098/rstb.2012.0358. Print 2013. Review.

11.

TRACER: a resource to study the regulatory architecture of the mouse genome.

Chen CK, Symmons O, Uslu VV, Tsujimura T, Ruf S, Smedley D, Spitz F.

BMC Genomics. 2013 Apr 2;14:215. doi: 10.1186/1471-2164-14-215.

12.

Phenotypic impact of genomic structural variation: insights from and for human disease.

Weischenfeldt J, Symmons O, Spitz F, Korbel JO.

Nat Rev Genet. 2013 Feb;14(2):125-38. doi: 10.1038/nrg3373. Review.

PMID:
23329113
13.

Large-scale analysis of the regulatory architecture of the mouse genome with a transposon-associated sensor.

Ruf S, Symmons O, Uslu VV, Dolle D, Hot C, Ettwiller L, Spitz F.

Nat Genet. 2011 Mar 20;43(4):379-86. doi: 10.1038/ng.790.

PMID:
21423180
14.

Predictable difficulty or difficulty to predict.

Arányi T, Fülöp K, Symmons O, Pomozi V, Váradi A.

Protein Sci. 2011 Jan;20(1):1-3; author reply 4-5. doi: 10.1002/pro.552. No abstract available.

15.

Clustering of disease-causing mutations on the domain-domain interfaces of ABCC6.

Fülöp K, Barna L, Symmons O, Závodszky P, Váradi A.

Biochem Biophys Res Commun. 2009 Feb 13;379(3):706-9. doi: 10.1016/j.bbrc.2008.12.142. Epub 2009 Jan 6.

PMID:
19133228
16.

How segmental duplications shape our genome: recent evolution of ABCC6 and PKD1 Mendelian disease genes.

Symmons O, Váradi A, Arányi T.

Mol Biol Evol. 2008 Dec;25(12):2601-13. doi: 10.1093/molbev/msn202. Epub 2008 Sep 12.

PMID:
18791038

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