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Items: 1 to 50 of 305

1.

Enterovibrio baiacu sp. nov.

Azevedo GPR, Mattsson HK, Appolinario LR, Calegario G, Leomil L, Walter JM, Campeão M, Tonon LAC, Moreira APB, Vidal L, Vieira VV, Otsuki K, Tschoeke DA, Swings J, Thompson FL, Thompson CC.

Curr Microbiol. 2019 Oct 16. doi: 10.1007/s00284-019-01785-7. [Epub ahead of print]

PMID:
31620811
2.

"Candidatus Colwellia aromaticivorans" sp. nov., "Candidatus Halocyntiibacter alkanivorans" sp. nov., and "Candidatus Ulvibacter alkanivorans" sp. nov. Genome Sequences.

Campeão ME, Swings J, Silva BS, Otsuki K, Thompson FL, Thompson CC.

Microbiol Resour Announc. 2019 Apr 11;8(15). pii: e00086-19. doi: 10.1128/MRA.00086-19.

3.

Halomonas coralii sp. nov. Isolated from Mussismilia braziliensis.

Vidal LMR, Gonçalves A, Venas TM, Campeão ME, Calegario G, Walter JM, Silva BS, Garcia GD, Tschoeke DA, Swings J, Thompson FL, Thompson CC.

Curr Microbiol. 2019 Jun;76(6):678-680. doi: 10.1007/s00284-019-01674-z. Epub 2019 Apr 4.

PMID:
30949804
4.

Genome Sequences of Vibrio maerlii sp. nov. and Vibrio rhodolitus sp. nov., Isolated from Rhodoliths.

Silva CSF, Walter JM, Nobrega MS, Calegario G, Appolinario LR, Leomil L, Cavalcanti G, Silva BS, Garcia GD, Tschoeke D, Swings J, Thompson FL, Thompson CC.

Microbiol Resour Announc. 2018 Nov 15;7(19). pii: e01039-18. doi: 10.1128/MRA.01039-18. eCollection 2018 Nov.

5.

Ecogenomics and Taxonomy of Cyanobacteria Phylum.

Walter JM, Coutinho FH, Dutilh BE, Swings J, Thompson FL, Thompson CC.

Front Microbiol. 2017 Nov 14;8:2132. doi: 10.3389/fmicb.2017.02132. eCollection 2017.

6.

Erratum to: Description of Endozoicomonas arenosclerae sp. nov. using a genomic taxonomy approach.

Appolinario LR, Tschoeke DA, Rua CP, Venas T, Campeão ME, Amaral GR, Leomil L, de Oliveira L, Vieira VV, Otsuki K, Swings J, Thompson FL, Thompson CC.

Antonie Van Leeuwenhoek. 2016 Jul;109(7):1071-1072. No abstract available.

PMID:
27222035
7.

Description of Endozoicomonas arenosclerae sp. nov. using a genomic taxonomy approach.

Appolinario LR, Tschoeke DA, Rua CP, Venas T, Campeão ME, Amaral GR, Leomil L, de Oliveira L, Vieira VV, Otsuki K, Swings J, Thompson FL, Thompson CC.

Antonie Van Leeuwenhoek. 2016 Mar;109(3):431-8. doi: 10.1007/s10482-016-0649-x. Epub 2016 Jan 19. Erratum in: Antonie Van Leeuwenhoek. 2016 Jul;109(7):1071-2.

PMID:
26786501
8.

BaMBa: towards the integrated management of Brazilian marine environmental data.

Meirelles PM, Gadelha LM Jr, Francini-Filho RB, de Moura RL, Amado-Filho GM, Bastos AC, Paranhos RP, Rezende CE, Swings J, Siegle E, Asp Neto NE, Leitão SN, Coutinho R, Mattoso M, Salomon PS, Valle RA, Pereira RC, Kruger RH, Thompson C, Thompson FL.

Database (Oxford). 2015 Oct 10;2015. pii: bav088. doi: 10.1093/database/bav088. Print 2015.

9.

Enterococcus bulliens sp. nov., a novel lactic acid bacterium isolated from camel milk.

Kadri Z, Spitaels F, Cnockaert M, Praet J, El Farricha O, Swings J, Vandamme P.

Antonie Van Leeuwenhoek. 2015 Nov;108(5):1257-65. doi: 10.1007/s10482-015-0579-z. Epub 2015 Sep 7.

PMID:
26346480
10.

Thermophilic bacteria in Moroccan hot springs, salt marshes and desert soils.

Aanniz T, Ouadghiri M, Melloul M, Swings J, Elfahime E, Ibijbijen J, Ismaili M, Amar M.

Braz J Microbiol. 2015 Jun 1;46(2):443-53. doi: 10.1590/S1517-838246220140219. eCollection 2015 Jun.

11.

Finding diagnostic phenotypic features of Photobacterium in the genome sequences.

Amaral GR, Campeão ME, Swings J, Thompson FL, Thompson CC.

Antonie Van Leeuwenhoek. 2015 May;107(5):1351-8. doi: 10.1007/s10482-015-0414-6. Epub 2015 Feb 28.

PMID:
25724129
12.

Microbial taxonomy in the post-genomic era: rebuilding from scratch?

Thompson CC, Amaral GR, Campeão M, Edwards RA, Polz MF, Dutilh BE, Ussery DW, Sawabe T, Swings J, Thompson FL.

Arch Microbiol. 2015 Apr;197(3):359-70. doi: 10.1007/s00203-014-1071-2. Epub 2014 Dec 23.

PMID:
25533848
13.

Streptococcus tangierensis sp. nov. and Streptococcus cameli sp. nov., two novel Streptococcus species isolated from raw camel milk in Morocco.

Kadri Z, Vandamme P, Ouadghiri M, Cnockaert M, Aerts M, Elfahime el M, Farricha OE, Swings J, Amar M.

Antonie Van Leeuwenhoek. 2015 Feb;107(2):503-10. doi: 10.1007/s10482-014-0346-6. Epub 2014 Dec 10.

PMID:
25491120
14.

Photobacterium sanctipauli sp. nov. isolated from bleached Madracis decactis (Scleractinia) in the St Peter & St Paul Archipelago, Mid-Atlantic Ridge, Brazil.

Moreira AP, Duytschaever G, Chimetto Tonon LA, Fróes AM, de Oliveira LS, Amado-Filho GM, Francini-Filho RB, De Vos P, Swings J, Thompson CC, Thompson FL.

PeerJ. 2014 Jun 19;2:e427. doi: 10.7717/peerj.427. eCollection 2014.

15.

Biodiversity of the Surface Microbial Consortia from Limburger, Reblochon, Livarot, Tilsit, and Gubbeen Cheeses.

Cogan TM, Goerges S, Gelsomino R, Larpin S, Hohenegger M, Bora N, Jamet E, Rea MC, Mounier J, Vancanneyt M, Guéguen M, Desmasures N, Swings J, Goodfellow M, Ward AC, Sebastiani H, Irlinger F, Chamba JF, Beduhn R, Scherer S.

Microbiol Spectr. 2014 Feb;2(1):CM-0010-2012. doi: 10.1128/microbiolspec.CM-0010-2012.

PMID:
26082119
16.

Microbial genomic taxonomy.

Thompson CC, Chimetto L, Edwards RA, Swings J, Stackebrandt E, Thompson FL.

BMC Genomics. 2013 Dec 23;14:913. doi: 10.1186/1471-2164-14-913.

17.

Genetic Diversity and Pathogenicity of Xanthomonas axonopodis Strains Inducing Citrus Canker Disease in Iran and South Korea.

Khodakaramian G, Swings J.

Indian J Microbiol. 2011 Jun;51(2):194-9. doi: 10.1007/s12088-011-0103-8. Epub 2011 Feb 5.

18.

Phylogenetic study of the species within the family Streptomycetaceae.

Labeda DP, Goodfellow M, Brown R, Ward AC, Lanoot B, Vanncanneyt M, Swings J, Kim SB, Liu Z, Chun J, Tamura T, Oguchi A, Kikuchi T, Kikuchi H, Nishii T, Tsuji K, Yamaguchi Y, Tase A, Takahashi M, Sakane T, Suzuki KI, Hatano K.

Antonie Van Leeuwenhoek. 2012 Jan;101(1):73-104. doi: 10.1007/s10482-011-9656-0. Epub 2011 Nov 2.

PMID:
22045019
19.

Surface microbial consortia from Livarot, a French smear-ripened cheese.

Larpin-Laborde S, Imran M, Bonaïti C, Bora N, Gelsomino R, Goerges S, Irlinger F, Goodfellow M, Ward AC, Vancanneyt M, Swings J, Scherer S, Guéguen M, Desmasures N.

Can J Microbiol. 2011 Aug;57(8):651-60. doi: 10.1139/w11-050. Epub 2011 Aug 4.

PMID:
21815832
20.

An MLSA-based online scheme for the rapid identification of Stenotrophomonas isolates.

Ramos PL, Moreira-Filho CA, Van Trappen S, Swings J, De Vos P, Barbosa HR, Thompson CC, Vasconcelos AT, Thompson FL.

Mem Inst Oswaldo Cruz. 2011 Jun;106(4):394-9.

21.

Streptomyces marokkonensis sp. nov., isolated from rhizosphere soil of Argania spinosa L.

Bouizgarne B, Lanoot B, Loqman S, Spröer C, Klenk HP, Swings J, Ouhdouch Y.

Int J Syst Evol Microbiol. 2009 Nov;59(Pt 11):2857-63. doi: 10.1099/ijs.0.011387-0. Epub 2009 Jul 23.

PMID:
19628602
22.

Pantoea vagans sp. nov., Pantoea eucalypti sp. nov., Pantoea deleyi sp. nov. and Pantoea anthophila sp. nov.

Brady CL, Venter SN, Cleenwerck I, Engelbeen K, Vancanneyt M, Swings J, Coutinho TA.

Int J Syst Evol Microbiol. 2009 Sep;59(Pt 9):2339-45. doi: 10.1099/ijs.0.009241-0. Epub 2009 Jul 20.

PMID:
19620357
23.

Phenotypic and genetic diversity of rice seed-associated bacteria and their role in pathogenicity and biological control.

Cottyn B, Debode J, Regalado E, Mew TW, Swings J.

J Appl Microbiol. 2009 Sep;107(3):885-97. doi: 10.1111/j.1365-2672.2009.04268.x. Epub 2009 Mar 26.

24.

Bacterial diversity from benthic mats of Antarctic lakes as a source of new bioactive metabolites.

Rojas JL, Martín J, Tormo JR, Vicente F, Brunati M, Ciciliato I, Losi D, Van Trappen S, Mergaert J, Swings J, Marinelli F, Genilloud O.

Mar Genomics. 2009 Mar;2(1):33-41. doi: 10.1016/j.margen.2009.03.005. Epub 2009 Apr 8.

PMID:
21798170
25.

ESSC-ESF position paper--science-driven scenario for space exploration: report from the European Space Sciences Committee (ESSC).

Worms JC, Lammer H, Barucci A, Beebe R, Bibring JP, Blamont J, Blanc M, Bonnet R, Brucato JR, Chassefière E, Coradini A, Crawford I, Ehrenfreund P, Falcke H, Gerzer R, Grady M, Grande M, Haerendel G, Horneck G, Koch B, Lobanov A, Lopez-Moreno JJ, Marco R, Norsk P, Rothery D, Swings JP, Tropea C, Ulamec S, Westall F, Zarnecki J.

Astrobiology. 2009 Jan-Feb;9(1):23-41. doi: 10.1089/ast.2007.1226.

PMID:
19203241
26.

Mycetocola reblochoni sp. nov., isolated from the surface microbial flora of Reblochon cheese.

Bora N, Vancanneyt M, Gelsomino R, Snauwaert C, Swings J, Jones AL, Ward AC, Chamba JF, Kroppenstedt RM, Schumann P, Goodfellow M.

Int J Syst Evol Microbiol. 2008 Dec;58(Pt 12):2687-93. doi: 10.1099/ijs.0.64201-0.

PMID:
19060041
27.

Identification of lactic acid bacteria in Moroccan raw milk and traditionally fermented skimmed milk 'lben'.

Ouadghiri M, Vancanneyt M, Vandamme P, Naser S, Gevers D, Lefebvre K, Swings J, Amar M.

J Appl Microbiol. 2009 Feb;106(2):486-95. doi: 10.1111/j.1365-2672.2008.04016.x. Epub 2008 Nov 29.

28.

Phylogeny and identification of Pantoea species associated with plants, humans and the natural environment based on multilocus sequence analysis (MLSA).

Brady C, Cleenwerck I, Venter S, Vancanneyt M, Swings J, Coutinho T.

Syst Appl Microbiol. 2008 Dec;31(6-8):447-60. doi: 10.1016/j.syapm.2008.09.004. Epub 2008 Nov 12.

PMID:
19008066
29.

Xanthomonas translucens from Small Grains: Diversity and Phytopathological Relevance.

Bragard C, Singer E, Alizadeh A, Vauterin L, Maraite H, Swings J.

Phytopathology. 1997 Nov;87(11):1111-7. doi: 10.1094/PHYTO.1997.87.11.1111.

30.

Synopsis on the taxonomy of the genus xanthomonas.

Vauterin L, Rademaker J, Swings J.

Phytopathology. 2000 Jul;90(7):677-82. doi: 10.1094/PHYTO.2000.90.7.677.

31.

Bacterial populations associated with rice seed in the tropical environment.

Cottyn B, Regalado E, Lanoot B, De Cleene M, Mew TW, Swings J.

Phytopathology. 2001 Mar;91(3):282-92. doi: 10.1094/PHYTO.2001.91.3.282.

32.

A comprehensive species to strain taxonomic framework for xanthomonas.

Rademaker JL, Louws FJ, Schultz MH, Rossbach U, Vauterin L, Swings J, de Bruijn FJ.

Phytopathology. 2005 Sep;95(9):1098-111. doi: 10.1094/PHYTO-95-1098.

33.

Genotypic diversity, antimicrobial resistance, and virulence factors of human isolates and probiotic cultures constituting two intraspecific groups of Enterococcus faecium isolates.

Vankerckhoven V, Huys G, Vancanneyt M, Snauwaert C, Swings J, Klare I, Witte W, Van Autgaerden T, Chapelle S, Lammens C, Goossens H.

Appl Environ Microbiol. 2008 Jul;74(14):4247-55. doi: 10.1128/AEM.02474-07. Epub 2008 May 16.

34.

Diversity of Vibrios associated with reared clams in Galicia (NW Spain).

Beaz Hidalgo R, Cleenwerck I, Balboa S, De Wachter M, Thompson FL, Swings J, De Vos P, Romalde JL.

Syst Appl Microbiol. 2008 Aug;31(3):215-22. doi: 10.1016/j.syapm.2008.04.001. Epub 2008 May 15.

PMID:
18482814
35.

Coamplification of eukaryotic DNA with 16S rRNA gene-based PCR primers: possible consequences for population fingerprinting of complex microbial communities.

Huys G, Vanhoutte T, Joossens M, Mahious AS, De Brandt E, Vermeire S, Swings J.

Curr Microbiol. 2008 Jun;56(6):553-7. doi: 10.1007/s00284-008-9122-z. Epub 2008 Feb 27.

PMID:
18301945
36.

Baseline microbiota activity and initial bifidobacteria counts influence responses to prebiotic dosing in healthy subjects.

de Preter V, Vanhoutte T, Huys G, Swings J, Rutgeerts P, Verbeke K.

Aliment Pharmacol Ther. 2008 Mar 15;27(6):504-13. Epub 2007 Dec 10.

37.

Identification of lactobacilli by pheS and rpoA gene sequence analyses.

Naser SM, Dawyndt P, Hoste B, Gevers D, Vandemeulebroecke K, Cleenwerck I, Vancanneyt M, Swings J.

Int J Syst Evol Microbiol. 2007 Dec;57(Pt 12):2777-89.

PMID:
18048724
38.

Phylogenetic analysis of vibrios and related species by means of atpA gene sequences.

Thompson CC, Thompson FL, Vicente AC, Swings J.

Int J Syst Evol Microbiol. 2007 Nov;57(Pt 11):2480-4.

PMID:
17978204
39.

Diversity analysis of dairy and nondairy Lactococcus lactis isolates, using a novel multilocus sequence analysis scheme and (GTG)5-PCR fingerprinting.

Rademaker JL, Herbet H, Starrenburg MJ, Naser SM, Gevers D, Kelly WJ, Hugenholtz J, Swings J, van Hylckama Vlieg JE.

Appl Environ Microbiol. 2007 Nov;73(22):7128-37. Epub 2007 Sep 21.

40.

Diversity of Shewanella population in fish Sparus aurata harvested in the Aegean Sea.

Tryfinopoulou P, Tsakalidou E, Vancanneyt M, Hoste B, Swings J, Nychas GJ.

J Appl Microbiol. 2007 Sep;103(3):711-21.

41.
42.

Stability of the biodiversity of the surface consortia of Gubbeen, a red-smear cheese.

Rea MC, Görges S, Gelsomino R, Brennan NM, Mounier J, Vancanneyt M, Scherer S, Swings J, Cogan TM.

J Dairy Sci. 2007 May;90(5):2200-10.

43.

Identification of lactobacilli isolated from the cloaca and vagina of laying hens and characterization for potential use as probiotics to control Salmonella Enteritidis.

Van Coillie E, Goris J, Cleenwerck I, Grijspeerdt K, Botteldoorn N, Van Immerseel F, De Buck J, Vancanneyt M, Swings J, Herman L, Heyndrickx M.

J Appl Microbiol. 2007 Apr;102(4):1095-106.

44.

Biodiversity of chloramphenicol-resistant mesophilic heterotrophs from Southeast Asian aquaculture environments.

Huys G, Bartie K, Cnockaert M, Hoang Oanh DT, Phuong NT, Somsiri T, Chinabut S, Yusoff FM, Shariff M, Giacomini M, Teale A, Swings J.

Res Microbiol. 2007 Apr;158(3):228-35. Epub 2007 Jan 27.

PMID:
17350231
45.

A FAFLP system for the improved identification of plant-pathogenic and plant-associated species of the genus Pantoea.

Brady C, Venter S, Cleenwerck I, Vancanneyt M, Swings J, Coutinho T.

Syst Appl Microbiol. 2007 Jul;30(5):413-7. Epub 2007 Feb 26.

PMID:
17321713
46.

Agrococcus casei sp. nov., isolated from the surfaces of smear-ripened cheeses.

Bora N, Vancanneyt M, Gelsomino R, Swings J, Brennan N, Cogan TM, Larpin S, Desmasures N, Lechner FE, Kroppenstedt RM, Ward AC, Goodfellow M.

Int J Syst Evol Microbiol. 2007 Jan;57(Pt 1):92-7.

PMID:
17220448
47.

Evaluation of real-time PCR targeting the 16S rRNA and recA genes for the enumeration of bifidobacteria in probiotic products.

Masco L, Vanhoutte T, Temmerman R, Swings J, Huys G.

Int J Food Microbiol. 2007 Feb 15;113(3):351-7. Epub 2006 Nov 7.

PMID:
17088006
48.

Reclassification of Lactobacillus amylophilus LMG 11400 and NRRL B-4435 as Lactobacillus amylotrophicus sp. nov.

Naser SM, Vancanneyt M, Snauwaert C, Vrancken G, Hoste B, De Vuyst L, Swings J.

Int J Syst Evol Microbiol. 2006 Nov;56(Pt 11):2523-7.

PMID:
17082384
49.

Stepping stones towards a new prokaryotic taxonomy.

Gevers D, Dawyndt P, Vandamme P, Willems A, Vancanneyt M, Swings J, De Vos P.

Philos Trans R Soc Lond B Biol Sci. 2006 Nov 29;361(1475):1911-6. Review.

50.

Effects of Lactobacillus casei Shirota, Bifidobacterium breve, and oligofructose-enriched inulin on colonic nitrogen-protein metabolism in healthy humans.

De Preter V, Vanhoutte T, Huys G, Swings J, De Vuyst L, Rutgeerts P, Verbeke K.

Am J Physiol Gastrointest Liver Physiol. 2007 Jan;292(1):G358-68. Epub 2006 Sep 21.

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