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Items: 1 to 50 of 54

1.

Tracking the dynamic representation of consonants from auditory periphery to cortex.

Sankaran N, Swaminathan J, Micheyl C, Kalluri S, Carlile S.

J Acoust Soc Am. 2018 Oct;144(4):2462. doi: 10.1121/1.5065492.

PMID:
30404465
2.

A "Buildup" of Speech Intelligibility in Listeners With Normal Hearing and Hearing Loss.

Best V, Swaminathan J, Kopčo N, Roverud E, Shinn-Cunningham B.

Trends Hear. 2018 Jan-Dec;22:2331216518807519. doi: 10.1177/2331216518807519.

3.

Highly parallel single-molecule identification of proteins in zeptomole-scale mixtures.

Swaminathan J, Boulgakov AA, Hernandez ET, Bardo AM, Bachman JL, Marotta J, Johnson AM, Anslyn EV, Marcotte EM.

Nat Biotechnol. 2018 Oct 22. doi: 10.1038/nbt.4278. [Epub ahead of print]

PMID:
30346938
4.

Effects of reverberation and noise on speech intelligibility in normal-hearing and aided hearing-impaired listeners.

Xia J, Xu B, Pentony S, Xu J, Swaminathan J.

J Acoust Soc Am. 2018 Mar;143(3):1523. doi: 10.1121/1.5026788.

PMID:
29604671
5.

Inorganic fouling mitigation by salinity cycling in batch reverse osmosis.

Warsinger DM, Tow EW, Maswadeh LA, Connors GB, Swaminathan J, Lienhard V JH.

Water Res. 2018 Jun 15;137:384-394. doi: 10.1016/j.watres.2018.01.060. Epub 2018 Feb 5.

PMID:
29573825
6.

Solution-phase and solid-phase sequential, selective modification of side chains in KDYWEC and KDYWE as models for usage in single-molecule protein sequencing.

Hernandez ET, Swaminathan J, Marcotte EM, Anslyn EV.

New J Chem. 2017 Jan 21;41(2):462-469. doi: 10.1039/C6NJ02932A. Epub 2016 Nov 18.

7.

Regulation of USP37 Expression by REST-Associated G9a-Dependent Histone Methylation.

Dobson THW, Hatcher RJ, Swaminathan J, Das CM, Shaik S, Tao RH, Milite C, Castellano S, Taylor PH, Sbardella G, Gopalakrishnan V.

Mol Cancer Res. 2017 Aug;15(8):1073-1084. doi: 10.1158/1541-7786.MCR-16-0424. Epub 2017 May 8.

8.

Use of a glimpsing model to understand the performance of listeners with and without hearing loss in spatialized speech mixtures.

Best V, Mason CR, Swaminathan J, Roverud E, Kidd G Jr.

J Acoust Soc Am. 2017 Jan;141(1):81. doi: 10.1121/1.4973620.

9.

Metaniche session 2016: Tailor-made sensors for rapid Therapeutic Drug Monitoring-Interactions between Biomaterial Physicists, Chemical Engineers and Clinicians for successful translation of technologies in Healthcare.

Yoshimi Y, Pushkala S, Vijaykumar H, Dedeepiya VD, Ignacy A, Swaminathan J, Rajmohan M, Karthick R, Abraham SJ.

J Stem Cells Regen Med. 2016 Nov 29;12(2):105-107. eCollection 2016. No abstract available.

10.

Evaluation of the Parasight Platform for Malaria Diagnosis.

Eshel Y, Houri-Yafin A, Benkuzari H, Lezmy N, Soni M, Charles M, Swaminathan J, Solomon H, Sampathkumar P, Premji Z, Mbithi C, Nneka Z, Onsongo S, Maina D, Levy-Schreier S, Cohen CL, Gluck D, Pollak JJ, Salpeter SJ.

J Clin Microbiol. 2017 Mar;55(3):768-775. doi: 10.1128/JCM.02155-16. Epub 2016 Dec 14.

11.

Role of Binaural Temporal Fine Structure and Envelope Cues in Cocktail-Party Listening.

Swaminathan J, Mason CR, Streeter TM, Best V, Roverud E, Kidd G Jr.

J Neurosci. 2016 Aug 3;36(31):8250-7. doi: 10.1523/JNEUROSCI.4421-15.2016.

12.

Determining the energetic and informational components of speech-on-speech masking.

Kidd G Jr, Mason CR, Swaminathan J, Roverud E, Clayton KK, Best V.

J Acoust Soc Am. 2016 Jul;140(1):132. doi: 10.1121/1.4954748.

13.

Closing the gap in Genetic Data Analysis pipelines with ASPIREdb.

Swaminathan J.

Hum Mutat. 2016 Aug;37(8):717. doi: 10.1002/humu.23029. No abstract available.

PMID:
27396953
14.

Executive Function, Visual Attention and the Cocktail Party Problem in Musicians and Non-Musicians.

Clayton KK, Swaminathan J, Yazdanbakhsh A, Zuk J, Patel AD, Kidd G Jr.

PLoS One. 2016 Jul 6;11(7):e0157638. doi: 10.1371/journal.pone.0157638. eCollection 2016.

15.

On the Contribution of Target Audibility to Performance in Spatialized Speech Mixtures.

Best V, Mason CR, Swaminathan J, Kidd G Jr, Jakien KM, Kampel SD, Gallun FJ, Buchholz JM, Glyde H.

Adv Exp Med Biol. 2016;894:83-91. doi: 10.1007/978-3-319-25474-6_10.

PMID:
27080649
16.

Informational Masking in Normal-Hearing and Hearing-Impaired Listeners Measured in a Nonspeech Pattern Identification Task.

Roverud E, Best V, Mason CR, Swaminathan J, Kidd G Jr.

Trends Hear. 2016 Apr 8;20. pii: 2331216516638516. doi: 10.1177/2331216516638516.

17.

Formulations for delivering Trichoderma atroviridae spores as seed coatings, effects of temperature and relative humidity on storage stability.

Swaminathan J, van Koten C, Henderson HV, Jackson TA, Wilson MJ.

J Appl Microbiol. 2016 Feb;120(2):425-31. doi: 10.1111/jam.13006.

PMID:
26600429
18.

Erratum: Musical training, individual differences and the cocktail party problem.

Swaminathan J, Mason CR, Streeter TM, Best V, Kidd G Jr, Patel AD.

Sci Rep. 2015 Sep 25;5:14401. doi: 10.1038/srep14401. No abstract available.

19.

Consonant identification in noise using Hilbert-transform temporal fine-structure speech and recovered-envelope speech for listeners with normal and impaired hearing.

Léger AC, Reed CM, Desloge JG, Swaminathan J, Braida LD.

J Acoust Soc Am. 2015 Jul;138(1):389-403. doi: 10.1121/1.4922949.

20.

Benefits of Acoustic Beamforming for Solving the Cocktail Party Problem.

Kidd G Jr, Mason CR, Best V, Swaminathan J.

Trends Hear. 2015 Jun 30;19. pii: 2331216515593385. doi: 10.1177/2331216515593385.

21.

Musical training, individual differences and the cocktail party problem.

Swaminathan J, Mason CR, Streeter TM, Best V, Kidd G Jr, Patel AD.

Sci Rep. 2015 Jun 26;5:11628. doi: 10.1038/srep11628. Erratum in: Sci Rep. 2015;5:14401.

22.

A theoretical justification for single molecule peptide sequencing.

Swaminathan J, Boulgakov AA, Marcotte EM.

PLoS Comput Biol. 2015 Feb 25;11(2):e1004080. doi: 10.1371/journal.pcbi.1004080. eCollection 2015 Feb.

23.

The role of recovered envelope cues in the identification of temporal-fine-structure speech for hearing-impaired listeners.

Léger AC, Desloge JG, Braida LD, Swaminathan J.

J Acoust Soc Am. 2015 Jan;137(1):505-8. doi: 10.1121/1.4904540.

24.

A self-assembling lanthanide molecular nanoparticle for optical imaging.

Brown KA, Yang X, Schipper D, Hall JW, DePue LJ, Gnanam AJ, Arambula JF, Jones JN, Swaminathan J, Dieye Y, Vadivelu J, Chandler DJ, Marcotte EM, Sessler JL, Ehrlich LI, Jones RA.

Dalton Trans. 2015 Feb 14;44(6):2667-75. doi: 10.1039/c4dt02646b.

25.

Lanthanide nano-drums: a new class of molecular nanoparticles for potential biomedical applications.

Jones RA, Gnanam AJ, Arambula JF, Jones JN, Swaminathan J, Yang X, Schipper D, Hall JW, DePue LJ, Dieye Y, Vadivelu J, Chandler DJ, Marcotte EM, Sessler JL, Ehrlich LI, Brown KA.

Faraday Discuss. 2014;175:241-55. doi: 10.1039/c4fd00117f.

26.

Consonant identification using temporal fine structure and recovered envelope cues.

Swaminathan J, Reed CM, Desloge JG, Braida LD, Delhorne LA.

J Acoust Soc Am. 2014 Apr;135(4):2078-90. doi: 10.1121/1.4865920.

27.

Hematological and biochemical parameters in apparently healthy Indian population: defining reference intervals.

Sairam S, Domalapalli S, Muthu S, Swaminathan J, Ramesh VA, Sekhar L, Pandeya P, Balasubramaniam U.

Indian J Clin Biochem. 2014 Jul;29(3):290-7. doi: 10.1007/s12291-013-0365-5. Epub 2013 Jul 23.

28.

Streamlining bottom-up protein identification based on selective ultraviolet photodissociation (UVPD) of chromophore-tagged histidine- and tyrosine-containing peptides.

Aponte JR, Vasicek L, Swaminathan J, Xu H, Koag MC, Lee S, Brodbelt JS.

Anal Chem. 2014 Jul 1;86(13):6237-44. doi: 10.1021/ac403654m. Epub 2014 Jun 16.

PMID:
24897623
29.

Effect of lyophilization on liposomal encapsulation of salmon calcitonin.

Swaminathan J, Ehrhardt C.

J Liposome Res. 2014 Dec;24(4):297-303. doi: 10.3109/08982104.2014.899366. Epub 2014 Apr 8.

PMID:
24708057
30.

Encapsulation into PEG-liposomes does not improve the bioavailability of pulmonary delivered salmon calcitonin.

Swaminathan J, Gobbo OL, Tewes F, Healy AM, Ehrhardt C.

J Aerosol Med Pulm Drug Deliv. 2014 Feb;27(1):1-11. doi: 10.1089/jamp.2013.1049. Epub 2013 Nov 19.

PMID:
24252061
31.

Transiently transfected purine biosynthetic enzymes form stress bodies.

Zhao A, Tsechansky M, Swaminathan J, Cook L, Ellington AD, Marcotte EM.

PLoS One. 2013;8(2):e56203. doi: 10.1371/journal.pone.0056203. Epub 2013 Feb 6.

32.

Liposomal delivery of proteins and peptides.

Swaminathan J, Ehrhardt C.

Expert Opin Drug Deliv. 2012 Dec;9(12):1489-503. doi: 10.1517/17425247.2012.735658. Epub 2012 Oct 23. Review.

PMID:
23092138
33.

Psychophysiological analyses demonstrate the importance of neural envelope coding for speech perception in noise.

Swaminathan J, Heinz MG.

J Neurosci. 2012 Feb 1;32(5):1747-56. doi: 10.1523/JNEUROSCI.4493-11.2012.

34.

Predicted effects of sensorineural hearing loss on across-fiber envelope coding in the auditory nerve.

Swaminathan J, Heinz MG.

J Acoust Soc Am. 2011 Jun;129(6):4001-13. doi: 10.1121/1.3583502.

35.

Straightforward and complete deposition of NMR data to the PDBe.

Penkett CJ, van Ginkel G, Velankar S, Swaminathan J, Ulrich EL, Mading S, Stevens TJ, Fogh RH, Gutmanas A, Kleywegt GJ, Henrick K, Vranken WF.

J Biomol NMR. 2010 Oct;48(2):85-92. doi: 10.1007/s10858-010-9439-3. Epub 2010 Aug 3.

36.

Cardioprotective properties of Crataegus oxycantha extract against ischemia-reperfusion injury.

Swaminathan JK, Khan M, Mohan IK, Selvendiran K, Niranjali Devaraj S, Rivera BK, Kuppusamy P.

Phytomedicine. 2010 Aug;17(10):744-52. doi: 10.1016/j.phymed.2010.01.009. Epub 2010 Feb 18.

37.

FT-IR, FT-Raman, ab initio and DFT structural and vibrational frequency analysis of 6-aminopenicillanic acid.

Swaminathan J, Ramalingam M, Sethuraman V, Sundaraganesan N, Sebastian S, Kurt M.

Spectrochim Acta A Mol Biomol Spectrosc. 2010 Jan;75(1):183-90. doi: 10.1016/j.saa.2009.10.010. Epub 2009 Nov 7.

PMID:
19897407
38.

FT-IR and FT-Raman vibrational assignment of 2-bromobenzoic acid with the help of ab initio and DFT calculations.

Swaminathan J, Ramalingam M, Saleem H, Sethuraman V, Ameen MT.

Spectrochim Acta A Mol Biomol Spectrosc. 2009 Dec;74(5):1247-53. doi: 10.1016/j.saa.2009.09.054. Epub 2009 Oct 6.

PMID:
19864180
39.

PDBe: Protein Data Bank in Europe.

Velankar S, Best C, Beuth B, Boutselakis CH, Cobley N, Sousa Da Silva AW, Dimitropoulos D, Golovin A, Hirshberg M, John M, Krissinel EB, Newman R, Oldfield T, Pajon A, Penkett CJ, Pineda-Castillo J, Sahni G, Sen S, Slowley R, Suarez-Uruena A, Swaminathan J, van Ginkel G, Vranken WF, Henrick K, Kleywegt GJ.

Nucleic Acids Res. 2010 Jan;38(Database issue):D308-17. doi: 10.1093/nar/gkp916. Epub 2009 Oct 25.

40.

Vibrational spectroscopic studies and DFT calculations of 4-aminoantipyrine.

Swaminathan J, Ramalingam M, Sethuraman V, Sundaraganesan N, Sebastian S.

Spectrochim Acta A Mol Biomol Spectrosc. 2009 Aug 15;73(4):593-600. doi: 10.1016/j.saa.2009.03.009. Epub 2009 Mar 27. Erratum in: Spectrochim Acta A Mol Biomol Spectrosc. 2009 Sep 15;74(1):305.

PMID:
19386538
41.

Quantifying envelope and fine-structure coding in auditory nerve responses to chimaeric speech.

Heinz MG, Swaminathan J.

J Assoc Res Otolaryngol. 2009 Sep;10(3):407-23. doi: 10.1007/s10162-009-0169-8. Epub 2009 Apr 14.

42.

Experience-dependent neural representation of dynamic pitch in the brainstem.

Krishnan A, Gandour JT, Bidelman GM, Swaminathan J.

Neuroreport. 2009 Mar 4;20(4):408-13. doi: 10.1097/WNR.0b013e3283263000.

43.

Effects of local mRNA structure on posttranscriptional gene silencing.

Rudnick SI, Swaminathan J, Sumaroka M, Liebhaber S, Gewirtz AM.

Proc Natl Acad Sci U S A. 2008 Sep 16;105(37):13787-92. doi: 10.1073/pnas.0805781105. Epub 2008 Sep 10.

44.

Molecular structure and vibrational spectra of 3-amino-5-hydroxypyrazole by density functional method.

Swaminathan J, Ramalingam M, Sundaraganesan N.

Spectrochim Acta A Mol Biomol Spectrosc. 2009 Jan;71(5):1776-82. doi: 10.1016/j.saa.2008.06.044. Epub 2008 Jul 10.

PMID:
18760957
45.

Experience-dependent enhancement of linguistic pitch representation in the brainstem is not specific to a speech context.

Krishnan A, Swaminathan J, Gandour JT.

J Cogn Neurosci. 2009 Jun;21(6):1092-105. doi: 10.1162/jocn.2009.21077.

46.

Harmonic analysis of vibrations of morpholine-4-ylmethylthiourea: a DFT, midinfrared and Raman spectral study.

Ramalingam M, Jaccob M, Swaminathan J, Venuvanalingam P, Sundaraganesan N.

Spectrochim Acta A Mol Biomol Spectrosc. 2008 Dec 1;71(3):996-1002. doi: 10.1016/j.saa.2008.02.034. Epub 2008 Feb 29.

PMID:
18602861
47.

Pitch encoding in speech and nonspeech contexts in the human auditory brainstem.

Swaminathan J, Krishnan A, Gandour JT.

Neuroreport. 2008 Jul 16;19(11):1163-7. doi: 10.1097/WNR.0b013e3283088d31.

48.

Applications of static and dynamic iterated rippled noise to evaluate pitch encoding in the human auditory brainstem.

Swaminathan J, Krishnan A, Gandour JT, Xu Y.

IEEE Trans Biomed Eng. 2008 Jan;55(1):281-7. doi: 10.1109/TBME.2007.896592.

PMID:
18232372
49.

Experimental (FTIR and FT-Raman) and ab initio and DFT study of vibrational frequencies of 5-amino-2-nitrobenzoic acid.

Ramalingam M, Sundaraganesan N, Saleem H, Swaminathan J.

Spectrochim Acta A Mol Biomol Spectrosc. 2008 Nov 1;71(1):23-30. doi: 10.1016/j.saa.2007.11.016. Epub 2007 Nov 28.

PMID:
18178128
50.

Remediation of the protein data bank archive.

Henrick K, Feng Z, Bluhm WF, Dimitropoulos D, Doreleijers JF, Dutta S, Flippen-Anderson JL, Ionides J, Kamada C, Krissinel E, Lawson CL, Markley JL, Nakamura H, Newman R, Shimizu Y, Swaminathan J, Velankar S, Ory J, Ulrich EL, Vranken W, Westbrook J, Yamashita R, Yang H, Young J, Yousufuddin M, Berman HM.

Nucleic Acids Res. 2008 Jan;36(Database issue):D426-33. Epub 2007 Dec 11.

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