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Items: 1 to 50 of 81

1.

High Time for Hair Cells: An Introduction to the Symposium on Sensory Hair Cells.

McPherson DR, Swalla BJ.

Integr Comp Biol. 2018 Aug 1;58(2):276-281. doi: 10.1093/icb/icy070.

PMID:
30137315
2.

Getting a Head with Ptychodera flava Larval Regeneration.

Luttrell SM, Su YH, Swalla BJ.

Biol Bull. 2018 Jun;234(3):152-164. doi: 10.1086/698510. Epub 2018 Jun 15.

PMID:
29949438
3.

Phylogenomics offers resolution of major tunicate relationships.

Kocot KM, Tassia MG, Halanych KM, Swalla BJ.

Mol Phylogenet Evol. 2018 Apr;121:166-173. doi: 10.1016/j.ympev.2018.01.005. Epub 2018 Jan 9.

PMID:
29330139
4.

Evolutionary loss of melanogenesis in the tunicate Molgula occulta.

Racioppi C, Valoroso MC, Coppola U, Lowe EK, Brown CT, Swalla BJ, Christiaen L, Stolfi A, Ristoratore F.

Evodevo. 2017 Jul 18;8:11. doi: 10.1186/s13227-017-0074-x. eCollection 2017.

5.

Head regeneration in hemichordates is not a strict recapitulation of development.

Luttrell SM, Gotting K, Ross E, Alvarado AS, Swalla BJ.

Dev Dyn. 2016 Dec;245(12):1159-1175. doi: 10.1002/dvdy.24457. Epub 2016 Oct 25.

6.

The Presence of a Functionally Tripartite Through-Gut in Ctenophora Has Implications for Metazoan Character Trait Evolution.

Presnell JS, Vandepas LE, Warren KJ, Swalla BJ, Amemiya CT, Browne WE.

Curr Biol. 2016 Oct 24;26(20):2814-2820. doi: 10.1016/j.cub.2016.08.019. Epub 2016 Aug 25.

7.

The Global Diversity of Hemichordata.

Tassia MG, Cannon JT, Konikoff CE, Shenkar N, Halanych KM, Swalla BJ.

PLoS One. 2016 Oct 4;11(10):e0162564. doi: 10.1371/journal.pone.0162564. eCollection 2016.

8.

A revisited phylogeography of Nautilus pompilius.

Vandepas LE, Dooley FD, Barord GJ, Swalla BJ, Ward PD.

Ecol Evol. 2016 Jun 21;6(14):4924-35. doi: 10.1002/ece3.2248. eCollection 2016 Jul.

9.

ANISEED 2015: a digital framework for the comparative developmental biology of ascidians.

Brozovic M, Martin C, Dantec C, Dauga D, Mendez M, Simion P, Percher M, Laporte B, Scornavacca C, Di Gregorio A, Fujiwara S, Gineste M, Lowe EK, Piette J, Racioppi C, Ristoratore F, Sasakura Y, Takatori N, Brown TC, Delsuc F, Douzery E, Gissi C, McDougall A, Nishida H, Sawada H, Swalla BJ, Yasuo H, Lemaire P.

Nucleic Acids Res. 2016 Jan 4;44(D1):D808-18. doi: 10.1093/nar/gkv966. Epub 2015 Sep 29.

10.

Biogeography of Phallusia nigra: is it really black and white?

Vandepas LE, Oliveira LM, Lee SS, Hirose E, Rocha RM, Swalla BJ.

Biol Bull. 2015 Feb;228(1):52-64.

PMID:
25745100
11.

Phylogenomic resolution of the hemichordate and echinoderm clade.

Cannon JT, Kocot KM, Waits DS, Weese DA, Swalla BJ, Santos SR, Halanych KM.

Curr Biol. 2014 Dec 1;24(23):2827-32. doi: 10.1016/j.cub.2014.10.016. Epub 2014 Nov 6.

12.

Metamorphosis in solitary ascidians.

Karaiskou A, Swalla BJ, Sasakura Y, Chambon JP.

Genesis. 2015 Jan;53(1):34-47. doi: 10.1002/dvg.22824. Epub 2014 Oct 14. Review.

PMID:
25250532
13.

Guidelines for the nomenclature of genetic elements in tunicate genomes.

Stolfi A, Sasakura Y, Chalopin D, Satou Y, Christiaen L, Dantec C, Endo T, Naville M, Nishida H, Swalla BJ, Volff JN, Voskoboynik A, Dauga D, Lemaire P.

Genesis. 2015 Jan;53(1):1-14. doi: 10.1002/dvg.22822. Epub 2014 Oct 3.

14.

Divergent mechanisms regulate conserved cardiopharyngeal development and gene expression in distantly related ascidians.

Stolfi A, Lowe EK, Racioppi C, Ristoratore F, Brown CT, Swalla BJ, Christiaen L.

Elife. 2014 Sep 10;3:e03728. doi: 10.7554/eLife.03728.

15.

The ctenophore genome and the evolutionary origins of neural systems.

Moroz LL, Kocot KM, Citarella MR, Dosung S, Norekian TP, Povolotskaya IS, Grigorenko AP, Dailey C, Berezikov E, Buckley KM, Ptitsyn A, Reshetov D, Mukherjee K, Moroz TP, Bobkova Y, Yu F, Kapitonov VV, Jurka J, Bobkov YV, Swore JJ, Girardo DO, Fodor A, Gusev F, Sanford R, Bruders R, Kittler E, Mills CE, Rast JP, Derelle R, Solovyev VV, Kondrashov FA, Swalla BJ, Sweedler JV, Rogaev EI, Halanych KM, Kohn AB.

Nature. 2014 Jun 5;510(7503):109-14. doi: 10.1038/nature13400. Epub 2014 May 21.

16.

Hemichordate molecular phylogeny reveals a novel cold-water clade of harrimaniid acorn worms.

Cannon JT, Swalla BJ, Halanych KM.

Biol Bull. 2013 Dec;225(3):194-204.

PMID:
24445445
17.

Modern Antarctic acorn worms form tubes.

Halanych KM, Cannon JT, Mahon AR, Swalla BJ, Smith CR.

Nat Commun. 2013;4:2738. doi: 10.1038/ncomms3738.

PMID:
24201563
18.

Arthur H. Whiteley (1916-2013).

Stricker SA, Swalla BJ.

Mol Reprod Dev. 2013 Jul;80(7):Fmi-Fmiii. doi: 10.1002/mrd.22211. No abstract available.

PMID:
23861210
19.

Developmental mode influences diversification in ascidians.

Maliska ME, Pennell MW, Swalla BJ.

Biol Lett. 2013 Apr 3;9(3):20130068. doi: 10.1098/rsbl.2013.0068. Print 2013 Jun 23.

20.

Phylogeography and reproductive variation of the poecilogonous polychaete Boccardia proboscidea (Annelida: Spionidae) along the West Coast of North America.

Oyarzun FX, Mahon AR, Swalla BJ, Halanych KM.

Evol Dev. 2011 Nov-Dec;13(6):489-503. doi: 10.1111/j.1525-142X.2011.00506.x.

PMID:
23016934
21.

Ptychoderid hemichordate neurulation without a notochord.

Luttrell S, Konikoff C, Byrne A, Bengtsson B, Swalla BJ.

Integr Comp Biol. 2012 Dec;52(6):829-34. doi: 10.1093/icb/ics117. Epub 2012 Sep 9.

PMID:
22966063
22.

Evolution and development of budding by stem cells: ascidian coloniality as a case study.

Brown FD, Swalla BJ.

Dev Biol. 2012 Sep 15;369(2):151-62. doi: 10.1016/j.ydbio.2012.05.038. Epub 2012 Jun 18. Review.

23.

Boltenia embryos flash an orange crescent.

Swalla BJ, Sherrard K; students of the Comparative Invertebrate Embryology course at FHL.

Mol Reprod Dev. 2011 Oct-Nov;78(10-11):703. doi: 10.1002/mrd.21388. No abstract available.

PMID:
22006440
24.

Global diversity of Ascidiacea.

Shenkar N, Swalla BJ.

PLoS One. 2011;6(6):e20657. doi: 10.1371/journal.pone.0020657. Epub 2011 Jun 20. Review.

25.

Molgula pugetiensis is a Pacific tailless ascidian within the Roscovita clade of molgulids.

Maliska ME, Swalla BJ.

Biol Bull. 2010 Dec;219(3):277-82. No abstract available.

PMID:
21183447
26.

Early lineage specification of long-lived germline precursors in the colonial ascidian Botryllus schlosseri.

Brown FD, Tiozzo S, Roux MM, Ishizuka K, Swalla BJ, De Tomaso AW.

Development. 2009 Oct;136(20):3485-94. doi: 10.1242/dev.037754.

27.

Whole body regeneration in a colonial ascidian, Botrylloides violaceus.

Brown FD, Keeling EL, Le AD, Swalla BJ.

J Exp Zool B Mol Dev Evol. 2009 Dec 15;312(8):885-900. doi: 10.1002/jez.b.21303.

PMID:
19588490
28.

Molecular phylogeny of hemichordata, with updated status of deep-sea enteropneusts.

Cannon JT, Rychel AL, Eccleston H, Halanych KM, Swalla BJ.

Mol Phylogenet Evol. 2009 Jul;52(1):17-24. doi: 10.1016/j.ympev.2009.03.027. Epub 2009 Apr 5.

PMID:
19348951
29.

Man is but a worm: chordate origins.

Brown FD, Prendergast A, Swalla BJ.

Genesis. 2008 Nov;46(11):605-13. doi: 10.1002/dvg.20471. Review.

PMID:
19003926
30.

Chordate origins and evolution.

Swalla BJ, Xavier-Neto J.

Genesis. 2008 Nov;46(11):575-9. doi: 10.1002/dvg.20477. No abstract available.

PMID:
19003925
31.

Anterior regeneration in the hemichordate Ptychodera flava.

Rychel AL, Swalla BJ.

Dev Dyn. 2008 Nov;237(11):3222-32. doi: 10.1002/dvdy.21747.

32.

Euro chordates: Ascidian community swims ahead. The 4th International Tunicate meeting in Villefranche sur Mer.

Sardet C, Swalla BJ, Satoh N, Sasakura Y, Branno M, Thompson EM, Levine M, Nishida H.

Dev Dyn. 2008 Apr;237(4):1207-13. doi: 10.1002/dvdy.21487. No abstract available.

33.

Deciphering deuterostome phylogeny: molecular, morphological and palaeontological perspectives.

Swalla BJ, Smith AB.

Philos Trans R Soc Lond B Biol Sci. 2008 Apr 27;363(1496):1557-68. doi: 10.1098/rstb.2007.2246. Review.

34.

The Hsp90 capacitor, developmental remodeling, and evolution: the robustness of gene networks and the curious evolvability of metamorphosis.

Rutherford S, Hirate Y, Swalla BJ.

Crit Rev Biochem Mol Biol. 2007 Sep-Oct;42(5):355-72. Review.

PMID:
17917872
35.

Analysis of large scale expression sequenced tags (ESTs) from the anural ascidian, Molgula tectiformis.

Gyoja F, Satou Y, Shin-i T, Kohara Y, Swalla BJ, Satoh N.

Dev Biol. 2007 Jul 15;307(2):460-82. Epub 2007 Mar 30.

36.

A complement response may activate metamorphosis in the ascidian Boltenia villosa.

Roberts B, Davidson B, MacMaster G, Lockhart V, Ma E, Wallace SS, Swalla BJ.

Dev Genes Evol. 2007 Jun;217(6):449-58. Epub 2007 May 12.

PMID:
17497166
37.

Vasa expression in a colonial ascidian, Botrylloides violaceus.

Brown FD, Swalla BJ.

Evol Dev. 2007 Mar-Apr;9(2):165-77.

PMID:
17371399
38.

Development and evolution of chordate cartilage.

Rychel AL, Swalla BJ.

J Exp Zool B Mol Dev Evol. 2007 May 15;308(3):325-35.

PMID:
17358002
39.

Building divergent body plans with similar genetic pathways.

Swalla BJ.

Heredity (Edinb). 2006 Sep;97(3):235-43. Epub 2006 Jul 26. Review.

40.

Coloniality has evolved once in Stolidobranch Ascidians.

Zeng L, Jacobs MW, Swalla BJ.

Integr Comp Biol. 2006 Jun;46(3):255-68. doi: 10.1093/icb/icj035. Epub 2006 May 3.

PMID:
21672740
41.

Evolution and development of the chordates: collagen and pharyngeal cartilage.

Rychel AL, Smith SE, Shimamoto HT, Swalla BJ.

Mol Biol Evol. 2006 Mar;23(3):541-9. Epub 2005 Nov 9.

PMID:
16280542
42.

Nodal signaling and the evolution of deuterostome gastrulation.

Chea HK, Wright CV, Swalla BJ.

Dev Dyn. 2005 Oct;234(2):269-78. Review.

43.

Procurement and culture of ascidian embryos.

Swalla BJ.

Methods Cell Biol. 2004;74:115-41. Review. No abstract available.

PMID:
15575605
44.

A morphological and genetic characterization of metamorphosis in the ascidian Boltenia villosa.

Davidson B, Smith Wallace SE, Howsmon RA, Swalla BJ.

Dev Genes Evol. 2003 Dec;213(12):601-11. Epub 2003 Nov 13.

PMID:
14615891
45.

Expression of Tbx6, a muscle lineage T-box gene, in the tailless embryo of the ascidian Molgula tectiformis.

Takada N, Satoh N, Swalla BJ.

Dev Genes Evol. 2002 Aug;212(7):354-6. No abstract available.

PMID:
12418495
46.
47.

Urochordates are monophyletic within the deuterostomes.

Swalla BJ, Cameron CB, Corley LS, Garey JR.

Syst Biol. 2000 Mar;49(1):52-64. Review.

PMID:
12116483
48.

Brachyury expression in tailless Molgulid ascidian embryos.

Takada N, York J, Davis JM, Schumpert B, Yasuo H, Satoh N, Swalla BJ.

Evol Dev. 2002 May-Jun;4(3):205-11.

PMID:
12054293
49.

Evaluating hypotheses of deuterostome phylogeny and chordate evolution with new LSU and SSU ribosomal DNA data.

Winchell CJ, Sullivan J, Cameron CB, Swalla BJ, Mallatt J.

Mol Biol Evol. 2002 May;19(5):762-76.

PMID:
11961109
50.

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