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Items: 1 to 50 of 66

1.

Mapping heterogeneity of cellular mechanics by multi-harmonic atomic force microscopy.

Efremov YM, Cartagena-Rivera AX, Athamneh AIM, Suter DM, Raman A.

Nat Protoc. 2018 Sep 14. doi: 10.1038/s41596-018-0031-8. [Epub ahead of print]

PMID:
30218102
2.

Single Live Cell Monitoring of Protein Turnover Reveals Intercellular Variability and Cell-Cycle Dependence of Degradation Rates.

Alber AB, Paquet ER, Biserni M, Naef F, Suter DM.

Mol Cell. 2018 Aug 17. pii: S1097-2765(18)30592-6. doi: 10.1016/j.molcel.2018.07.023. [Epub ahead of print]

PMID:
30146318
3.

Modulation of transcriptional burst frequency by histone acetylation.

Nicolas D, Zoller B, Suter DM, Naef F.

Proc Natl Acad Sci U S A. 2018 Jul 3;115(27):7153-7158. doi: 10.1073/pnas.1722330115. Epub 2018 Jun 18.

4.

nox2/cybb Deficiency Affects Zebrafish Retinotectal Connectivity.

Weaver CJ, Terzi A, Roeder H, Gurol T, Deng Q, Leung YF, Suter DM.

J Neurosci. 2018 Jun 27;38(26):5854-5871. doi: 10.1523/JNEUROSCI.1483-16.2018. Epub 2018 May 23.

PMID:
29793976
5.
6.

A low-cost microwell device for high-resolution imaging of neurite outgrowth in 3D.

Ren Y, Mlodzianoski MJ, Lee AC, Huang F, Suter DM.

J Neural Eng. 2018 Jun;15(3):035001. doi: 10.1088/1741-2552/aaaa32. Epub 2018 Jan 24.

PMID:
29363623
7.

Engineered Multivalent Sensors to Detect Coexisting Histone Modifications in Living Stem Cells.

Delachat AM, Guidotti N, Bachmann AL, Meireles-Filho ACA, Pick H, Lechner CC, Deluz C, Deplancke B, Suter DM, Fierz B.

Cell Chem Biol. 2018 Jan 18;25(1):51-56.e6. doi: 10.1016/j.chembiol.2017.10.008. Epub 2017 Nov 22.

PMID:
29174541
8.

Transcription factor retention on mitotic chromosomes: regulatory mechanisms and impact on cell fate decisions.

Raccaud M, Suter DM.

FEBS Lett. 2018 Mar;592(6):878-887. doi: 10.1002/1873-3468.12828. Epub 2017 Sep 12. Review.

PMID:
28862742
9.

Neurite elongation is highly correlated with bulk forward translocation of microtubules.

Athamneh AIM, He Y, Lamoureux P, Fix L, Suter DM, Miller KE.

Sci Rep. 2017 Aug 4;7(1):7292. doi: 10.1038/s41598-017-07402-6.

10.

sCMOS noise-correction algorithm for microscopy images.

Liu S, Mlodzianoski MJ, Hu Z, Ren Y, McElmurry K, Suter DM, Huang F.

Nat Methods. 2017 Jul 28;14(8):760-761. doi: 10.1038/nmeth.4379. No abstract available.

11.

A novel method for quantitative measurements of gene expression in single living cells.

Mandic A, Strebinger D, Regali C, Phillips NE, Suter DM.

Methods. 2017 May 1;120:65-75. doi: 10.1016/j.ymeth.2017.04.008. Epub 2017 Apr 27.

PMID:
28456689
12.

The elusive role of mitotic bookmarking in transcriptional regulation: Insights from Sox2.

Deluz C, Strebinger D, Friman ET, Suter DM.

Cell Cycle. 2017 Apr 3;16(7):601-606. doi: 10.1080/15384101.2017.1288332. Epub 2017 Feb 6.

13.

A role for mitotic bookmarking of SOX2 in pluripotency and differentiation.

Deluz C, Friman ET, Strebinger D, Benke A, Raccaud M, Callegari A, Leleu M, Manley S, Suter DM.

Genes Dev. 2016 Nov 15;30(22):2538-2550. Epub 2016 Dec 5.

14.

Increase in Growth Cone Size Correlates with Decrease in Neurite Growth Rate.

Ren Y, Suter DM.

Neural Plast. 2016;2016:3497901. doi: 10.1155/2016/3497901. Epub 2016 May 4.

15.

Editorial: Neuronal Mechanics and Transport.

Miller KE, Suter DM.

Front Cell Neurosci. 2016 Jan 26;10:1. doi: 10.3389/fncel.2016.00001. eCollection 2016. No abstract available.

16.

Expression dynamics of NADPH oxidases during early zebrafish development.

Weaver CJ, Leung YF, Suter DM.

J Comp Neurol. 2016 Jul 1;524(10):2130-41. doi: 10.1002/cne.23938. Epub 2015 Dec 29.

PMID:
26662995
17.

Substrate Deformation Predicts Neuronal Growth Cone Advance.

Athamneh AI, Cartagena-Rivera AX, Raman A, Suter DM.

Biophys J. 2015 Oct 6;109(7):1358-71. doi: 10.1016/j.bpj.2015.08.013.

18.

Quantifying mechanical force in axonal growth and guidance.

Athamneh AI, Suter DM.

Front Cell Neurosci. 2015 Sep 16;9:359. doi: 10.3389/fncel.2015.00359. eCollection 2015. Review.

19.

Src and cortactin promote lamellipodia protrusion and filopodia formation and stability in growth cones.

He Y, Ren Y, Wu B, Decourt B, Lee AC, Taylor A, Suter DM.

Mol Biol Cell. 2015 Sep 15;26(18):3229-44. doi: 10.1091/mbc.E15-03-0142. Epub 2015 Jul 29.

20.

Bidirectional interactions between NOX2-type NADPH oxidase and the F-actin cytoskeleton in neuronal growth cones.

Munnamalai V, Weaver CJ, Weisheit CE, Venkatraman P, Agim ZS, Quinn MT, Suter DM.

J Neurochem. 2014 Aug;130(4):526-40. doi: 10.1111/jnc.12734. Epub 2014 Apr 25.

21.

Spatial organization of RNA polymerase II inside a mammalian cell nucleus revealed by reflected light-sheet superresolution microscopy.

Zhao ZW, Roy R, Gebhardt JC, Suter DM, Chapman AR, Xie XS.

Proc Natl Acad Sci U S A. 2014 Jan 14;111(2):681-6. doi: 10.1073/pnas.1318496111. Epub 2013 Dec 30.

22.

Stimulus-induced modulation of transcriptional bursting in a single mammalian gene.

Molina N, Suter DM, Cannavo R, Zoller B, Gotic I, Naef F.

Proc Natl Acad Sci U S A. 2013 Dec 17;110(51):20563-8. doi: 10.1073/pnas.1312310110. Epub 2013 Dec 2.

23.

Reply to "Convergence of chromatin binding estimates in live cells".

Zhao ZW, Gebhardt JC, Suter DM, Xie XS.

Nat Methods. 2013 Aug;10(8):692. doi: 10.1038/nmeth.2574. No abstract available.

PMID:
23900249
24.

Axon outgrowth: motor protein moonlights in microtubule sliding.

Hollenbeck PJ, Suter DM.

Curr Biol. 2013 Jul 8;23(13):R575-6. doi: 10.1016/j.cub.2013.05.025.

25.

Single-molecule imaging of transcription factor binding to DNA in live mammalian cells.

Gebhardt JC, Suter DM, Roy R, Zhao ZW, Chapman AR, Basu S, Maniatis T, Xie XS.

Nat Methods. 2013 May;10(5):421-6. doi: 10.1038/nmeth.2411. Epub 2013 Mar 24.

26.

Embryonic stem cell-based screen for small molecules: cluster analysis reveals four response patterns in developing neural cells.

Kern I, Xu R, Julien S, Suter DM, Preynat-Seauve O, Baquié M, Poncet A, Combescure C, Stoppini L, Thriel CV, Krause KH.

Curr Med Chem. 2013;20(5):710-23.

PMID:
23231350
27.

Magnetic tweezers-based force clamp reveals mechanically distinct apCAM domain interactions.

Kilinc D, Blasiak A, O'Mahony JJ, Suter DM, Lee GU.

Biophys J. 2012 Sep 19;103(6):1120-9. doi: 10.1016/j.bpj.2012.08.025.

28.

Circadian Dbp transcription relies on highly dynamic BMAL1-CLOCK interaction with E boxes and requires the proteasome.

Stratmann M, Suter DM, Molina N, Naef F, Schibler U.

Mol Cell. 2012 Oct 26;48(2):277-87. doi: 10.1016/j.molcel.2012.08.012. Epub 2012 Sep 13.

29.

Single-molecule force spectroscopy of the Aplysia cell adhesion molecule reveals two homophilic bonds.

Martines E, Zhong J, Muzard J, Lee AC, Akhremitchev BB, Suter DM, Lee GU.

Biophys J. 2012 Aug 22;103(4):649-57. doi: 10.1016/j.bpj.2012.07.004.

30.

How to get on the right track.

Suter DM, Hollenbeck PJ.

Nat Neurosci. 2011 Dec 23;15(1):7-8. doi: 10.1038/nn.3015. No abstract available.

PMID:
22193250
31.

The mammalian circadian timing system: synchronization of peripheral clocks.

Saini C, Suter DM, Liani A, Gos P, Schibler U.

Cold Spring Harb Symp Quant Biol. 2011;76:39-47. doi: 10.1101/sqb.2011.76.010918. Epub 2011 Dec 16. Review.

PMID:
22179985
32.

Origins and consequences of transcriptional discontinuity.

Suter DM, Molina N, Naef F, Schibler U.

Curr Opin Cell Biol. 2011 Dec;23(6):657-62. doi: 10.1016/j.ceb.2011.09.004. Epub 2011 Sep 29. Review.

PMID:
21963300
33.

Live cell imaging of neuronal growth cone motility and guidance in vitro.

Suter DM.

Methods Mol Biol. 2011;769:65-86. doi: 10.1007/978-1-61779-207-6_6.

34.

The emerging role of forces in axonal elongation.

Suter DM, Miller KE.

Prog Neurobiol. 2011 Jul;94(2):91-101. doi: 10.1016/j.pneurobio.2011.04.002. Epub 2011 Apr 20. Review.

35.

Rescue of infectious particles from preassembled alphavirus nucleocapsid cores.

Snyder JE, Azizgolshani O, Wu B, He Y, Lee AC, Jose J, Suter DM, Knobler CM, Gelbart WM, Kuhn RJ.

J Virol. 2011 Jun;85(12):5773-81. doi: 10.1128/JVI.00039-11. Epub 2011 Apr 6.

36.

Mammalian genes are transcribed with widely different bursting kinetics.

Suter DM, Molina N, Gatfield D, Schneider K, Schibler U, Naef F.

Science. 2011 Apr 22;332(6028):472-4. doi: 10.1126/science.1198817. Epub 2011 Mar 17.

37.

Phenazopyridine induces and synchronizes neuronal differentiation of embryonic stem cells.

Suter DM, Preynat-Seauve O, Tirefort D, Feki A, Krause KH.

J Cell Mol Med. 2009 Sep;13(9B):3517-27. doi: 10.1111/j.1582-4934.2009.00660.x.

38.

Isoform- and dose-sensitive feedback interactions between paired box 6 gene and delta-catenin in cell differentiation and death.

Zhang J, Lu JP, Suter DM, Krause KH, Fini ME, Chen B, Lu Q.

Exp Cell Res. 2010 Apr 1;316(6):1070-81. doi: 10.1016/j.yexcr.2010.01.006. Epub 2010 Jan 11.

39.

Physiology. Feeding the clock.

Suter DM, Schibler U.

Science. 2009 Oct 16;326(5951):378-9. doi: 10.1126/science.1181278. No abstract available.

PMID:
19833950
40.

Topography and nanomechanics of live neuronal growth cones analyzed by atomic force microscopy.

Xiong Y, Lee AC, Suter DM, Lee GU.

Biophys J. 2009 Jun 17;96(12):5060-72. doi: 10.1016/j.bpj.2009.03.032.

41.

Development of human nervous tissue upon differentiation of embryonic stem cells in three-dimensional culture.

Preynat-Seauve O, Suter DM, Tirefort D, Turchi L, Virolle T, Chneiweiss H, Foti M, Lobrinus JA, Stoppini L, Feki A, Dubois-Dauphin M, Krause KH.

Stem Cells. 2009 Mar;27(3):509-20. doi: 10.1634/stemcells.2008-0600.

42.

Reactive oxygen species regulate F-actin dynamics in neuronal growth cones and neurite outgrowth.

Munnamalai V, Suter DM.

J Neurochem. 2009 Feb;108(3):644-61. doi: 10.1111/j.1471-4159.2008.05787.x. Epub 2008 Nov 17.

43.

Cortactin colocalizes with filopodial actin and accumulates at IgCAM adhesion sites in Aplysia growth cones.

Decourt B, Munnamalai V, Lee AC, Sanchez L, Suter DM.

J Neurosci Res. 2009 Apr;87(5):1057-68. doi: 10.1002/jnr.21937.

44.

A Sox1 to Pax6 switch drives neuroectoderm to radial glia progression during differentiation of mouse embryonic stem cells.

Suter DM, Tirefort D, Julien S, Krause KH.

Stem Cells. 2009 Jan;27(1):49-58. doi: 10.1634/stemcells.2008-0319.

45.

Microtubule-mediated Src tyrosine kinase trafficking in neuronal growth cones.

Wu B, Decourt B, Zabidi MA, Wuethrich LT, Kim WH, Zhou Z, MacIsaac K, Suter DM.

Mol Biol Cell. 2008 Nov;19(11):4611-27. doi: 10.1091/mbc.E08-06-0603. Epub 2008 Aug 20.

46.

Quantitative analysis of microtubule dynamics during adhesion-mediated growth cone guidance.

Lee AC, Suter DM.

Dev Neurobiol. 2008 Oct;68(12):1363-77. doi: 10.1002/dneu.20662.

47.

Neural commitment of embryonic stem cells: molecules, pathways and potential for cell therapy.

Suter DM, Krause KH.

J Pathol. 2008 Aug;215(4):355-68. doi: 10.1002/path.2380. Review.

PMID:
18566959
48.

Analysis of cell-cell contact mediated by Ig superfamily cell adhesion molecules.

Sonderegger P, Kunz S, Rader C, Suter DM, Stoeckli ET.

Curr Protoc Cell Biol. 2001 Aug;Chapter 9:Unit 9.5. doi: 10.1002/0471143030.cb0905s11.

PMID:
18228394
49.

A pure population of ectodermal cells derived from human embryonic stem cells.

Aberdam E, Barak E, Rouleau M, de LaForest S, Berrih-Aknin S, Suter DM, Krause KH, Amit M, Itskovitz-Eldor J, Aberdam D.

Stem Cells. 2008 Feb;26(2):440-4. Epub 2007 Nov 21.

50.

Genetic engineering of embryonic stem cells.

Suter DM, Dubois-Dauphin M, Krause KH.

Swiss Med Wkly. 2007 Mar 2;137 Suppl 155:36S-38S.

PMID:
17874499

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