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Items: 39

1.

Complete Genome Sequences of Four Serotypes of Dengue Virus Prototype Continuously Maintained in the Laboratory.

Chin-Inmanu K, Suttitheptumrong A, Sangsrakru D, Mairiang D, Tangphatsornruang S, Malasit P, Suriyaphol P.

Microbiol Resour Announc. 2019 May 9;8(19). pii: e00199-19. doi: 10.1128/MRA.00199-19.

2.

Comparisons of whole-genome sequencing and phenotypic drug susceptibility testing for Mycobacterium tuberculosis causing MDR-TB and XDR-TB in Thailand.

Faksri K, Kaewprasert O, Ong RT, Suriyaphol P, Prammananan T, Teo YY, Srilohasin P, Chaiprasert A.

Int J Antimicrob Agents. 2019 Apr 11. pii: S0924-8579(19)30090-1. doi: 10.1016/j.ijantimicag.2019.04.004. [Epub ahead of print]

PMID:
30981926
3.

Chronology of emergence of the genus Leptospira and over-representation of gene families enriched by vitamin B2, B12 biosynthesis, cell adhesion and external encapsulating structure in L. interrogans isolates from asymptomatic dogs.

Kurilung A, Keeratipusana C, Horiike T, Suriyaphol P, Hampson DJ, Prapasarakul N.

Infect Genet Evol. 2019 Apr 8;73:7-12. doi: 10.1016/j.meegid.2019.04.005. [Epub ahead of print]

PMID:
30974265
4.

Correction to: Genomic analysis of Leptospira interrogans serovar Paidjan and Dadas isolates from carrier dogs and comparative genomic analysis to detect genes under positive selection.

Kurilung A, Keeratipusana C, Suriyaphol P, Hampson DJ, Prapasarakul N.

BMC Genomics. 2019 Mar 28;20(1):246. doi: 10.1186/s12864-019-5612-6.

5.

Genomic analysis of Leptospira interrogans serovar Paidjan and Dadas isolates from carrier dogs and comparative genomic analysis to detect genes under positive selection.

Kurilung A, Keeratipusana C, Suriyaphol P, Hampson DJ, Prapasarakul N.

BMC Genomics. 2019 Mar 4;20(1):168. doi: 10.1186/s12864-019-5562-z. Erratum in: BMC Genomics. 2019 Mar 28;20(1):246.

6.

Comparative whole-genome sequence analysis of Mycobacterium tuberculosis isolated from tuberculous meningitis and pulmonary tuberculosis patients.

Faksri K, Xia E, Ong RT, Tan JH, Nonghanphithak D, Makhao N, Thamnongdee N, Thanormchat A, Phurattanakornkul A, Rattanarangsee S, Ratanajaraya C, Suriyaphol P, Prammananan T, Teo YY, Chaiprasert A.

Sci Rep. 2018 Mar 20;8(1):4910. doi: 10.1038/s41598-018-23337-y.

7.

Probing the Phylogenomics and Putative Pathogenicity Genes of Pythium insidiosum by Oomycete Genome Analyses.

Rujirawat T, Patumcharoenpol P, Lohnoo T, Yingyong W, Kumsang Y, Payattikul P, Tangphatsornruang S, Suriyaphol P, Reamtong O, Garg G, Kittichotirat W, Krajaejun T.

Sci Rep. 2018 Mar 7;8(1):4135. doi: 10.1038/s41598-018-22540-1.

8.

Joint ancestry and association test indicate two distinct pathogenic pathways involved in classical dengue fever and dengue shock syndrome.

Oliveira M, Lert-Itthiporn W, Cavadas B, Fernandes V, Chuansumrit A, Anunciação O, Casademont I, Koeth F, Penova M, Tangnararatchakit K, Khor CC, Paul R, Malasit P, Matsuda F, Simon-Lorière E, Suriyaphol P, Pereira L, Sakuntabhai A.

PLoS Negl Trop Dis. 2018 Feb 15;12(2):e0006202. doi: 10.1371/journal.pntd.0006202. eCollection 2018 Feb.

9.

Validation of genotype imputation in Southeast Asian populations and the effect of single nucleotide polymorphism annotation on imputation outcome.

Lert-Itthiporn W, Suktitipat B, Grove H, Sakuntabhai A, Malasit P, Tangthawornchaikul N, Matsuda F, Suriyaphol P.

BMC Med Genet. 2018 Feb 13;19(1):23. doi: 10.1186/s12881-018-0534-8.

10.

Draft Genome Sequence of a Leptospira interrogans Strain Isolated from the Urine of an Asymptomatic Dog in Thailand.

Kurilung A, Keeratipusana C, Suriyaphol P, Prapasarakul N.

Genome Announc. 2018 Jan 25;6(4). pii: e01140-17. doi: 10.1128/genomeA.01140-17.

11.

Characterising private and shared signatures of positive selection in 37 Asian populations.

Liu X, Lu D, Saw WY, Shaw PJ, Wangkumhang P, Ngamphiw C, Fucharoen S, Lert-Itthiporn W, Chin-Inmanu K, Chau TN, Anders K, Kasturiratne A, de Silva HJ, Katsuya T, Kimura R, Nabika T, Ohkubo T, Tabara Y, Takeuchi F, Yamamoto K, Yokota M, Mamatyusupu D, Yang W, Chung YJ, Jin L, Hoh BP, Wickremasinghe AR, Ong RH, Khor CC, Dunstan SJ, Simmons C, Tongsima S, Suriyaphol P, Kato N, Xu S, Teo YY.

Eur J Hum Genet. 2017 Apr;25(4):499-508. doi: 10.1038/ejhg.2016.181. Epub 2017 Jan 18.

12.

A simple grid implementation with Berkeley Open Infrastructure for Network Computing using BLAST as a model.

Pinthong W, Muangruen P, Suriyaphol P, Mairiang D.

PeerJ. 2016 Jul 28;4:e2248. doi: 10.7717/peerj.2248. eCollection 2016.

13.

Plasmid metagenomics reveals multiple antibiotic resistance gene classes among the gut microbiomes of hospitalised patients.

Jitwasinkul T, Suriyaphol P, Tangphatsornruang S, Hansen MA, Hansen LH, Sørensen SJ, Permpikul C, Rongrungruang Y, Tribuddharat C.

J Glob Antimicrob Resist. 2016 Sep;6:57-66. doi: 10.1016/j.jgar.2016.03.001. Epub 2016 Apr 19.

PMID:
27530840
14.

Whole-Genome Sequencing Analysis of Serially Isolated Multi-Drug and Extensively Drug Resistant Mycobacterium tuberculosis from Thai Patients.

Faksri K, Tan JH, Disratthakit A, Xia E, Prammananan T, Suriyaphol P, Khor CC, Teo YY, Ong RT, Chaiprasert A.

PLoS One. 2016 Aug 12;11(8):e0160992. doi: 10.1371/journal.pone.0160992. eCollection 2016.

15.

A novel start codon mutation of the MERTK gene in a patient with retinitis pigmentosa.

Jinda W, Poungvarin N, Taylor TD, Suzuki Y, Thongnoppakhun W, Limwongse C, Lertrit P, Suriyaphol P, Atchaneeyasakul LO.

Mol Vis. 2016 Apr 21;22:342-51. eCollection 2016.

16.

Draft Genome Sequence of the Pathogenic Oomycete Pythium insidiosum Strain Pi-S, Isolated from a Patient with Pythiosis.

Rujirawat T, Patumcharoenpol P, Lohnoo T, Yingyong W, Lerksuthirat T, Tangphatsornruang S, Suriyaphol P, Grenville-Briggs LJ, Garg G, Kittichotirat W, Krajaejun T.

Genome Announc. 2015 Jun 18;3(3). pii: e00574-15. doi: 10.1128/genomeA.00574-15.

17.

High Anti-Dengue Virus Activity of the OAS Gene Family Is Associated With Increased Severity of Dengue.

Simon-Loriere E, Lin RJ, Kalayanarooj SM, Chuansumrit A, Casademont I, Lin SY, Yu HP, Lert-Itthiporn W, Chaiyaratana W, Tangthawornchaikul N, Tangnararatchakit K, Vasanawathana S, Chang BL, Suriyaphol P, Yoksan S, Malasit P, Despres P, Paul R, Lin YL, Sakuntabhai A.

J Infect Dis. 2015 Dec 15;212(12):2011-20. doi: 10.1093/infdis/jiv321. Epub 2015 Jun 10.

PMID:
26063222
18.

Draft Genome Sequence of an Extensively Drug-Resistant Mycobacterium tuberculosis Manu-Ancestor Spoligo-International Type 523 Isolate from Thailand.

Regmi SM, Chaiprasert A, Coker OO, Disratthakit A, Prammananan T, Suriyaphol P, Yik-Ying T, Twee Hee O.

Genome Announc. 2015 Feb 19;3(1). pii: e01589-14. doi: 10.1128/genomeA.01589-14.

19.

Whole-Genome Sequence of a Multidrug-Resistant Mycobacterium tuberculosis Beijing Sequence Type 10 Isolate from an Outbreak in Thailand.

Coker OO, Regmi SM, Suriyaphol P, Chininmanu K, Prammananan T, Chaiprasert A.

Genome Announc. 2014 Aug 14;2(4). pii: e00803-14. doi: 10.1128/genomeA.00803-14.

20.

Transcriptome analysis reveals pathogenicity and evolutionary history of the pathogenic oomycete Pythium insidiosum.

Krajaejun T, Lerksuthirat T, Garg G, Lowhnoo T, Yingyong W, Khositnithikul R, Tangphatsornruang S, Suriyaphol P, Ranganathan S, Sullivan TD.

Fungal Biol. 2014 Jul;118(7):640-53. doi: 10.1016/j.funbio.2014.01.009. Epub 2014 Feb 6.

PMID:
25088078
21.

Whole exome sequencing in Thai patients with retinitis pigmentosa reveals novel mutations in six genes.

Jinda W, Taylor TD, Suzuki Y, Thongnoppakhun W, Limwongse C, Lertrit P, Suriyaphol P, Trinavarat A, Atchaneeyasakul LO.

Invest Ophthalmol Vis Sci. 2014 Apr 7;55(4):2259-68. doi: 10.1167/iovs.13-13567.

PMID:
24618324
22.

Viral quasispecies inference from 454 pyrosequencing.

Poh WT, Xia E, Chin-Inmanu K, Wong LP, Cheng AY, Malasit P, Suriyaphol P, Teo YY, Ong RT.

BMC Bioinformatics. 2013 Dec 5;14:355. doi: 10.1186/1471-2105-14-355.

23.

Comparison of phi29-based whole genome amplification and whole transcriptome amplification in dengue virus.

Sujayanont P, Chininmanu K, Tassaneetrithep B, Tangthawornchaikul N, Malasit P, Suriyaphol P.

J Virol Methods. 2014 Jan;195:141-7. doi: 10.1016/j.jviromet.2013.10.005. Epub 2013 Oct 12.

24.

A simplified positive-sense-RNA virus construction approach that enhances analysis throughput.

Siridechadilok B, Gomutsukhavadee M, Sawaengpol T, Sangiambut S, Puttikhunt C, Chin-inmanu K, Suriyaphol P, Malasit P, Screaton G, Mongkolsapaya J.

J Virol. 2013 Dec;87(23):12667-74. doi: 10.1128/JVI.02261-13. Epub 2013 Sep 18.

25.

Deferiprone (GPO-L-ONE(®) ) monotherapy reduces iron overload in transfusion-dependent thalassemias: 1-year results from a multicenter prospective, single arm, open label, dose escalating phase III pediatric study (GPO-L-ONE; A001) from Thailand.

Viprakasit V, Nuchprayoon I, Chuansumrit A, Torcharus K, Pongtanakul B, Laothamatas J, Srichairatanakool S, Pooliam J, Supajitkasem S, Suriyaphol P, Tanphaichitr VS, Tuchinda S.

Am J Hematol. 2013 Apr;88(4):251-60. doi: 10.1002/ajh.23386. Epub 2013 Mar 5.

26.

Identification of new protein interactions between dengue fever virus and its hosts, human and mosquito.

Mairiang D, Zhang H, Sodja A, Murali T, Suriyaphol P, Malasit P, Limjindaporn T, Finley RL Jr.

PLoS One. 2013;8(1):e53535. doi: 10.1371/journal.pone.0053535. Epub 2013 Jan 11.

27.

Feasibility of using 454 pyrosequencing for studying quasispecies of the whole dengue viral genome.

Chin-inmanu K, Suttitheptumrong A, Sangsrakru D, Tangphatsornruang S, Tragoonrung S, Malasit P, Tungpradabkul S, Suriyaphol P.

BMC Genomics. 2012;13 Suppl 7:S7. doi: 10.1186/1471-2164-13-S7-S7. Epub 2012 Dec 13.

28.

Genetic polymorphisms associated with anti-malarial antibody levels in a low and unstable malaria transmission area in southern Sri Lanka.

Dewasurendra RL, Suriyaphol P, Fernando SD, Carter R, Rockett K, Corran P, Kwiatkowski D, Karunaweera ND; 7 MalariaGEN Consortium.

Malar J. 2012 Aug 20;11:281.

29.

Expressed sequence tags reveal genetic diversity and putative virulence factors of the pathogenic oomycete Pythium insidiosum.

Krajaejun T, Khositnithikul R, Lerksuthirat T, Lowhnoo T, Rujirawat T, Petchthong T, Yingyong W, Suriyaphol P, Smittipat N, Juthayothin T, Phuntumart V, Sullivan TD.

Fungal Biol. 2011 Jul;115(7):683-96. doi: 10.1016/j.funbio.2011.05.001. Epub 2011 May 11.

PMID:
21724174
30.

Identification and characterization of RpoS regulon and RpoS-dependent promoters in Burkholderia pseudomallei.

Osiriphun Y, Wongtrakoongate P, Sanongkiet S, Suriyaphol P, Thongboonkerd V, Tungpradabkul S.

J Proteome Res. 2009 Jun;8(6):3118-31. doi: 10.1021/pr900066h.

PMID:
19364128
31.

Codon volatility of hemagglutinin genes of H5N1 avian influenza viruses from different clades.

Auewarakul P, Chatsurachai S, Kongchanagul A, Kanrai P, Upala S, Suriyaphol P, Puthavathana P.

Virus Genes. 2009 Jun;38(3):404-7. doi: 10.1007/s11262-009-0349-y. Epub 2009 Mar 24.

PMID:
19308713
32.

Enzymatically hydrolyzed low-density lipoprotein modulates inflammatory responses in endothelial cells.

Fenske D, Dersch K, Lux C, Zipse L, Suriyaphol P, Dragneva Y, Han SR, Bhakdi S, Husmann M.

Thromb Haemost. 2008 Dec;100(6):1146-54.

PMID:
19132242
33.

Indigenous sources of 2007-2008 H5N1 avian influenza outbreaks in Thailand.

Chaichoune K, Wiriyarat W, Thitithanyanont A, Phonarknguen R, Sariya L, Suwanpakdee S, Noimor T, Chatsurachai S, Suriyaphol P, Ungchusak K, Ratanakorn P, Webster RG, Thompson M, Auewarakul P, Puthavathana P.

J Gen Virol. 2009 Jan;90(Pt 1):216-22. doi: 10.1099/vir.0.005660-0.

PMID:
19088292
34.

Differential responses of cells from human skin keratinocyte and bovine mammary epithelium to attack by pore-forming Staphylococcus aureus alpha-toxin.

Suriyaphol G, Sarikaputi M, Suriyaphol P.

Comp Immunol Microbiol Infect Dis. 2009 Nov;32(6):491-502. doi: 10.1016/j.cimid.2008.07.002. Epub 2008 Aug 30.

PMID:
18757097
35.

A variant in the CD209 promoter is associated with severity of dengue disease.

Sakuntabhai A, Turbpaiboon C, Casadémont I, Chuansumrit A, Lowhnoo T, Kajaste-Rudnitski A, Kalayanarooj SM, Tangnararatchakit K, Tangthawornchaikul N, Vasanawathana S, Chaiyaratana W, Yenchitsomanus PT, Suriyaphol P, Avirutnan P, Chokephaibulkit K, Matsuda F, Yoksan S, Jacob Y, Lathrop GM, Malasit P, Desprès P, Julier C.

Nat Genet. 2005 May;37(5):507-13. Epub 2005 Apr 17.

PMID:
15838506
36.

Enzymatic modification of low-density lipoprotein in the arterial wall: a new role for plasmin and matrix metalloproteinases in atherogenesis.

Torzewski M, Suriyaphol P, Paprotka K, Spath L, Ochsenhirt V, Schmitt A, Han SR, Husmann M, Gerl VB, Bhakdi S, Lackner KJ.

Arterioscler Thromb Vasc Biol. 2004 Nov;24(11):2130-6. Epub 2004 Sep 2.

PMID:
15345515
37.

Possible protective role for C-reactive protein in atherogenesis: complement activation by modified lipoproteins halts before detrimental terminal sequence.

Bhakdi S, Torzewski M, Paprotka K, Schmitt S, Barsoom H, Suriyaphol P, Han SR, Lackner KJ, Husmann M.

Circulation. 2004 Apr 20;109(15):1870-6. Epub 2004 Mar 22.

PMID:
15037531
38.

Enzymatically modified LDL induces cathepsin H in human monocytes: potential relevance in early atherogenesis.

Han SR, Momeni A, Strach K, Suriyaphol P, Fenske D, Paprotka K, Hashimoto SI, Torzewski M, Bhakdi S, Husmann M.

Arterioscler Thromb Vasc Biol. 2003 Apr 1;23(4):661-7. Epub 2003 Feb 27.

PMID:
12615673
39.

Enzymatically modified nonoxidized low-density lipoprotein induces interleukin-8 in human endothelial cells: role of free fatty acids.

Suriyaphol P, Fenske D, Zähringer U, Han SR, Bhakdi S, Husmann M.

Circulation. 2002 Nov 12;106(20):2581-7. Erratum in: Circulation. 2003 Jul 29;108(4):501.

PMID:
12427655

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