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Items: 1 to 50 of 97

1.

Complete Genome Sequence of Phascolarctobacterium faecium JCM 30894, a Succinate-Utilizing Bacterium Isolated from Human Feces.

Ogata Y, Suda W, Ikeyama N, Hattori M, Ohkuma M, Sakamoto M.

Microbiol Resour Announc. 2019 Jan 17;8(3). pii: e01487-18. doi: 10.1128/MRA.01487-18. eCollection 2019 Jan.

2.

Deep sequencing reveals specific bacterial signatures in the subgingival microbiota of healthy subjects.

Ikeda E, Shiba T, Ikeda Y, Suda W, Nakasato A, Takeuchi Y, Azuma M, Hattori M, Izumi Y.

Clin Oral Investig. 2019 Jan 24. doi: 10.1007/s00784-019-02805-3. [Epub ahead of print]

PMID:
30680442
3.

A defined commensal consortium elicits CD8 T cells and anti-cancer immunity.

Tanoue T, Morita S, Plichta DR, Skelly AN, Suda W, Sugiura Y, Narushima S, Vlamakis H, Motoo I, Sugita K, Shiota A, Takeshita K, Yasuma-Mitobe K, Riethmacher D, Kaisho T, Norman JM, Mucida D, Suematsu M, Yaguchi T, Bucci V, Inoue T, Kawakami Y, Olle B, Roberts B, Hattori M, Xavier RJ, Atarashi K, Honda K.

Nature. 2019 Jan;565(7741):600-605. doi: 10.1038/s41586-019-0878-z. Epub 2019 Jan 23.

PMID:
30675064
4.

Influence of Porphyromonas gingivalis in gut microbiota of streptozotocin-induced diabetic mice.

Ohtsu A, Takeuchi Y, Katagiri S, Suda W, Maekawa S, Shiba T, Komazaki R, Udagawa S, Sasaki N, Hattori M, Izumi Y.

Oral Dis. 2019 Jan 22. doi: 10.1111/odi.13044. [Epub ahead of print]

PMID:
30667148
5.

Gut pathobionts underlie intestinal barrier dysfunction and liver T helper 17 cell immune response in primary sclerosing cholangitis.

Nakamoto N, Sasaki N, Aoki R, Miyamoto K, Suda W, Teratani T, Suzuki T, Koda Y, Chu PS, Taniki N, Yamaguchi A, Kanamori M, Kamada N, Hattori M, Ashida H, Sakamoto M, Atarashi K, Narushima S, Yoshimura A, Honda K, Sato T, Kanai T.

Nat Microbiol. 2019 Jan 14. doi: 10.1038/s41564-018-0333-1. [Epub ahead of print]

PMID:
30643240
6.

Draft Genome Sequence of Lactobacillus kosoi NBRC 113063, Isolated from Kôso, a Japanese Sugar-Vegetable Fermented Beverage.

Chiou TY, Suda W, Oshima K, Hattori M, Matsuzaki C, Yamamoto K, Takahashi T.

Microbiol Resour Announc. 2018 Nov 21;7(20). pii: e01173-18. doi: 10.1128/MRA.01173-18. eCollection 2018 Nov.

7.

Fecal microbiota transplantation with frozen capsules for a patient with refractory acute gut graft-versus-host disease.

Kaito S, Toya T, Yoshifuji K, Kurosawa S, Inamoto K, Takeshita K, Suda W, Kakihana K, Honda K, Hattori M, Ohashi K.

Blood Adv. 2018 Nov 27;2(22):3097-3101. doi: 10.1182/bloodadvances.2018024968. No abstract available.

8.

Gut microbiota-derived D-serine protects against acute kidney injury.

Nakade Y, Iwata Y, Furuichi K, Mita M, Hamase K, Konno R, Miyake T, Sakai N, Kitajima S, Toyama T, Shinozaki Y, Sagara A, Miyagawa T, Hara A, Shimizu M, Kamikawa Y, Sato K, Oshima M, Yoneda-Nakagawa S, Yamamura Y, Kaneko S, Miyamoto T, Katane M, Homma H, Morita H, Suda W, Hattori M, Wada T.

JCI Insight. 2018 Oct 18;3(20). pii: 97957. doi: 10.1172/jci.insight.97957. [Epub ahead of print]

9.

[Analysis of human microbiome using NGS.]

Suda W, Ogata Y, Nishijima S.

Clin Calcium. 2018;28(9):1274-1281. doi: CliCa180912741281. Japanese.

PMID:
30146515
10.

Organic electrochromic timer for enzymatic skin patches.

Kai H, Suda W, Yoshida S, Nishizawa M.

Biosens Bioelectron. 2019 Jan 1;123:108-113. doi: 10.1016/j.bios.2018.07.013. Epub 2018 Jul 10.

PMID:
30029842
11.

The effect of fecal microbiota transplantation on psychiatric symptoms among patients with irritable bowel syndrome, functional diarrhea and functional constipation: An open-label observational study.

Kurokawa S, Kishimoto T, Mizuno S, Masaoka T, Naganuma M, Liang KC, Kitazawa M, Nakashima M, Shindo C, Suda W, Hattori M, Kanai T, Mimura M.

J Affect Disord. 2018 Aug 1;235:506-512. doi: 10.1016/j.jad.2018.04.038. Epub 2018 Apr 12.

PMID:
29684865
12.

Computer-guided design of optimal microbial consortia for immune system modulation.

Stein RR, Tanoue T, Szabady RL, Bhattarai SK, Olle B, Norman JM, Suda W, Oshima K, Hattori M, Gerber GK, Sander C, Honda K, Bucci V.

Elife. 2018 Apr 17;7. pii: e30916. doi: 10.7554/eLife.30916.

13.

Dysbiosis of the salivary microbiota in pediatric-onset primary sclerosing cholangitis and its potential as a biomarker.

Iwasawa K, Suda W, Tsunoda T, Oikawa-Kawamoto M, Umetsu S, Takayasu L, Inui A, Fujisawa T, Morita H, Sogo T, Hattori M.

Sci Rep. 2018 Apr 3;8(1):5480. doi: 10.1038/s41598-018-23870-w.

14.

Fecal microbiota transplantation for recurrent Clostridium difficile infection in a patient with ulcerative colitis.

Nanki K, Mizuno S, Matsuoka K, Ono K, Sugimoto S, Kiyohara H, Arai M, Nakashima M, Takeshita K, Saigusa K, Senoh M, Fukuda T, Naganuma M, Kato H, Suda W, Hattori M, Kanai T.

Intest Res. 2018 Jan;16(1):142-146. doi: 10.5217/ir.2018.16.1.142. Epub 2018 Jan 18.

15.

Lactobacillus kosoi sp. nov., a fructophilic species isolated from kôso, a Japanese sugar-vegetable fermented beverage.

Chiou TY, Suda W, Oshima K, Hattori M, Matsuzaki C, Yamamoto K, Takahashi T.

Antonie Van Leeuwenhoek. 2018 Jul;111(7):1149-1156. doi: 10.1007/s10482-018-1019-7. Epub 2018 Jan 20.

PMID:
29353462
16.

Correction: Vibrio aphrogenes sp. nov., in the Rumoiensis clade isolated from a seaweed.

Tanaka M, Endo S, Kotake F, Al-Saari N, Amin AKMR, Feng G, Mino S, Doi H, Ogura Y, Hayashi T, Suda W, Hattori M, Yumoto I, Sawabe T, Sawabe T, Araki T.

PLoS One. 2017 Dec 7;12(12):e0189555. doi: 10.1371/journal.pone.0189555. eCollection 2017.

17.

Efficacy of Indigo Naturalis in a Multicenter Randomized Controlled Trial of Patients With Ulcerative Colitis.

Naganuma M, Sugimoto S, Mitsuyama K, Kobayashi T, Yoshimura N, Ohi H, Tanaka S, Andoh A, Ohmiya N, Saigusa K, Yamamoto T, Morohoshi Y, Ichikawa H, Matsuoka K, Hisamatsu T, Watanabe K, Mizuno S, Suda W, Hattori M, Fukuda S, Hirayama A, Abe T, Watanabe M, Hibi T, Suzuki Y, Kanai T; INDIGO Study Group.

Gastroenterology. 2018 Mar;154(4):935-947. doi: 10.1053/j.gastro.2017.11.024. Epub 2017 Nov 22.

PMID:
29174928
18.

Corrigendum to "Vibrio ishigakensis sp. nov., in Halioticoli clade isolated from seawater in Okinawa coral reef area, Japan" [Syst. Appl. Microbiol. 39 (5) (2016) 330-335].

Gao F, Al-Saari N, Rohul Amin AKM, Sato K, Mino S, Suda W, Oshima K, Hattori M, Ohkuma M, Hargreaves PI, Meirelles PM, Thompson FL, Thompson C, Gomez-Gil B, Sawabe T, Sawabe T.

Syst Appl Microbiol. 2017 Dec;40(8):516. doi: 10.1016/j.syapm.2017.10.002. No abstract available.

PMID:
29100655
19.

Commensal Lactobacillus Controls Immune Tolerance during Acute Liver Injury in Mice.

Nakamoto N, Amiya T, Aoki R, Taniki N, Koda Y, Miyamoto K, Teratani T, Suzuki T, Chiba S, Chu PS, Hayashi A, Yamaguchi A, Shiba S, Miyake R, Katayama T, Suda W, Mikami Y, Kamada N, Ebinuma H, Saito H, Hattori M, Kanai T.

Cell Rep. 2017 Oct 31;21(5):1215-1226. doi: 10.1016/j.celrep.2017.10.022.

20.

Ectopic colonization of oral bacteria in the intestine drives TH1 cell induction and inflammation.

Atarashi K, Suda W, Luo C, Kawaguchi T, Motoo I, Narushima S, Kiguchi Y, Yasuma K, Watanabe E, Tanoue T, Thaiss CA, Sato M, Toyooka K, Said HS, Yamagami H, Rice SA, Gevers D, Johnson RC, Segre JA, Chen K, Kolls JK, Elinav E, Morita H, Xavier RJ, Hattori M, Honda K.

Science. 2017 Oct 20;358(6361):359-365. doi: 10.1126/science.aan4526.

21.

Microbiome profile of the amniotic fluid as a predictive biomarker of perinatal outcome.

Urushiyama D, Suda W, Ohnishi E, Araki R, Kiyoshima C, Kurakazu M, Sanui A, Yotsumoto F, Murata M, Nabeshima K, Yasunaga S, Saito S, Nomiyama M, Hattori M, Miyamoto S, Hata K.

Sci Rep. 2017 Sep 22;7(1):12171. doi: 10.1038/s41598-017-11699-8.

22.

Gallbladder-derived surfactant protein D regulates gut commensal bacteria for maintaining intestinal homeostasis.

Sarashina-Kida H, Negishi H, Nishio J, Suda W, Nakajima Y, Yasui-Kato M, Iwaisako K, Kang S, Endo N, Yanai H, Asagiri M, Kida H, Hattori M, Kumanogoh A, Taniguchi T.

Proc Natl Acad Sci U S A. 2017 Sep 19;114(38):10178-10183. doi: 10.1073/pnas.1712837114. Epub 2017 Sep 6.

23.

Aging-related changes in the diversity of women's skin microbiomes associated with oral bacteria.

Shibagaki N, Suda W, Clavaud C, Bastien P, Takayasu L, Iioka E, Kurokawa R, Yamashita N, Hattori Y, Shindo C, Breton L, Hattori M.

Sci Rep. 2017 Sep 5;7(1):10567. doi: 10.1038/s41598-017-10834-9.

24.

Intestinal Dysbiosis and Biotin Deprivation Induce Alopecia through Overgrowth of Lactobacillus murinus in Mice.

Hayashi A, Mikami Y, Miyamoto K, Kamada N, Sato T, Mizuno S, Naganuma M, Teratani T, Aoki R, Fukuda S, Suda W, Hattori M, Amagai M, Ohyama M, Kanai T.

Cell Rep. 2017 Aug 15;20(7):1513-1524. doi: 10.1016/j.celrep.2017.07.057.

25.

A 3-dimensional mathematical model of microbial proliferation that generates the characteristic cumulative relative abundance distributions in gut microbiomes.

Takayasu L, Suda W, Watanabe E, Fukuda S, Takanashi K, Ohno H, Takayasu M, Takayasu H, Hattori M.

PLoS One. 2017 Aug 8;12(8):e0180863. doi: 10.1371/journal.pone.0180863. eCollection 2017.

26.

Clinical impact of pre-transplant gut microbial diversity on outcomes of allogeneic hematopoietic stem cell transplantation.

Doki N, Suyama M, Sasajima S, Ota J, Igarashi A, Mimura I, Morita H, Fujioka Y, Sugiyama D, Nishikawa H, Shimazu Y, Suda W, Takeshita K, Atarashi K, Hattori M, Sato E, Watakabe-Inamoto K, Yoshioka K, Najima Y, Kobayashi T, Kakihana K, Takahashi N, Sakamaki H, Honda K, Ohashi K.

Ann Hematol. 2017 Sep;96(9):1517-1523. doi: 10.1007/s00277-017-3069-8. Epub 2017 Jul 21.

PMID:
28733895
27.

Vibrio aphrogenes sp. nov., in the Rumoiensis clade isolated from a seaweed.

Tanaka M, Endo S, Kotake F, Al-Saari N, Amin AKMR, Feng G, Mino S, Doi H, Ogura Y, Hayashi T, Suda W, Hattori M, Yumoto I, Sawabe T, Sawabe T, Araki T.

PLoS One. 2017 Jun 29;12(6):e0180053. doi: 10.1371/journal.pone.0180053. eCollection 2017. Erratum in: PLoS One. 2017 Dec 7;12 (12 ):e0189555.

28.

Bifidobacterium-Rich Fecal Donor May Be a Positive Predictor for Successful Fecal Microbiota Transplantation in Patients with Irritable Bowel Syndrome.

Mizuno S, Masaoka T, Naganuma M, Kishimoto T, Kitazawa M, Kurokawa S, Nakashima M, Takeshita K, Suda W, Mimura M, Hattori M, Kanai T.

Digestion. 2017;96(1):29-38. doi: 10.1159/000471919. Epub 2017 Jun 21.

29.

Intrinsically Stretchable Electrochromic Display by a Composite Film of Poly(3,4-ethylenedioxythiophene) and Polyurethane.

Kai H, Suda W, Ogawa Y, Nagamine K, Nishizawa M.

ACS Appl Mater Interfaces. 2017 Jun 14;9(23):19513-19518. doi: 10.1021/acsami.7b03124. Epub 2017 May 25.

PMID:
28530794
30.

Circadian oscillations of microbial and functional composition in the human salivary microbiome.

Takayasu L, Suda W, Takanashi K, Iioka E, Kurokawa R, Shindo C, Hattori Y, Yamashita N, Nishijima S, Oshima K, Hattori M.

DNA Res. 2017 Jun 1;24(3):261-270. doi: 10.1093/dnares/dsx001.

31.

Dysbiosis and compositional alterations with aging in the gut microbiota of patients with heart failure.

Kamo T, Akazawa H, Suda W, Saga-Kamo A, Shimizu Y, Yagi H, Liu Q, Nomura S, Naito AT, Takeda N, Harada M, Toko H, Kumagai H, Ikeda Y, Takimoto E, Suzuki JI, Honda K, Morita H, Hattori M, Komuro I.

PLoS One. 2017 Mar 22;12(3):e0174099. doi: 10.1371/journal.pone.0174099. eCollection 2017.

32.

A proliferative probiotic Bifidobacterium strain in the gut ameliorates progression of metabolic disorders via microbiota modulation and acetate elevation.

Aoki R, Kamikado K, Suda W, Takii H, Mikami Y, Suganuma N, Hattori M, Koga Y.

Sci Rep. 2017 Mar 2;7:43522. doi: 10.1038/srep43522.

33.

Single fecal microbiota transplantation failed to change intestinal microbiota and had limited effectiveness against ulcerative colitis in Japanese patients.

Mizuno S, Nanki K, Matsuoka K, Saigusa K, Ono K, Arai M, Sugimoto S, Kiyohara H, Nakashima M, Takeshita K, Naganuma M, Suda W, Hattori M, Kanai T.

Intest Res. 2017 Jan;15(1):68-74. doi: 10.5217/ir.2017.15.1.68. Epub 2017 Jan 31.

34.

Confounding effects of microbiome on the susceptibility of TNFSF15 to Crohn's disease in the Ryukyu Islands.

Nakagome S, Chinen H, Iraha A, Hokama A, Takeyama Y, Sakisaka S, Matsui T, Kidd JR, Kidd KK, Said HS, Suda W, Morita H, Hattori M, Hanihara T, Kimura R, Ishida H, Fujita J, Kinjo F, Mano S, Oota H.

Hum Genet. 2017 Apr;136(4):387-397. doi: 10.1007/s00439-017-1764-0. Epub 2017 Feb 14.

PMID:
28197769
35.

Changes in the bacterial community in the fermentation process of kôso, a Japanese sugar-vegetable fermented beverage.

Chiou TY, Suda W, Oshima K, Hattori M, Takahashi T.

Biosci Biotechnol Biochem. 2017 Feb;81(2):403-410. doi: 10.1080/09168451.2016.1249449. Epub 2016 Nov 1.

PMID:
27800754
36.

Uremic Toxin-Producing Gut Microbiota in Rats with Chronic Kidney Disease.

Kikuchi M, Ueno M, Itoh Y, Suda W, Hattori M.

Nephron. 2017;135(1):51-60. doi: 10.1159/000450619. Epub 2016 Oct 5.

PMID:
27701177
37.

Characterisation of the faecal microbiota in Japanese patients with paediatric-onset primary sclerosing cholangitis.

Iwasawa K, Suda W, Tsunoda T, Oikawa-Kawamoto M, Umetsu S, Inui A, Fujisawa T, Morita H, Sogo T, Hattori M.

Gut. 2017 Jul;66(7):1344-1346. doi: 10.1136/gutjnl-2016-312533. Epub 2016 Sep 26. No abstract available.

38.

Microbial nitrification in throughfall of a Japanese cedar associated with archaea from the tree canopy.

Watanabe K, Kohzu A, Suda W, Yamamura S, Takamatsu T, Takenaka A, Koshikawa MK, Hayashi S, Watanabe M.

Springerplus. 2016 Sep 17;5(1):1596. doi: 10.1186/s40064-016-3286-y. eCollection 2016.

39.

Nitrogen fixation and nifH diversity in human gut microbiota.

Igai K, Itakura M, Nishijima S, Tsurumaru H, Suda W, Tsutaya T, Tomitsuka E, Tadokoro K, Baba J, Odani S, Natsuhara K, Morita A, Yoneda M, Greenhill AR, Horwood PF, Inoue J, Ohkuma M, Hongoh Y, Yamamoto T, Siba PM, Hattori M, Minamisawa K, Umezaki M.

Sci Rep. 2016 Aug 24;6:31942. doi: 10.1038/srep31942.

40.

Fecal microbiota transplantation for patients with steroid-resistant acute graft-versus-host disease of the gut.

Kakihana K, Fujioka Y, Suda W, Najima Y, Kuwata G, Sasajima S, Mimura I, Morita H, Sugiyama D, Nishikawa H, Hattori M, Hino Y, Ikegawa S, Yamamoto K, Toya T, Doki N, Koizumi K, Honda K, Ohashi K.

Blood. 2016 Oct 20;128(16):2083-2088. doi: 10.1182/blood-2016-05-717652. Epub 2016 Jul 26.

41.

Ecophysiological consequences of alcoholism on human gut microbiota: implications for ethanol-related pathogenesis of colon cancer.

Tsuruya A, Kuwahara A, Saito Y, Yamaguchi H, Tsubo T, Suga S, Inai M, Aoki Y, Takahashi S, Tsutsumi E, Suwa Y, Morita H, Kinoshita K, Totsuka Y, Suda W, Oshima K, Hattori M, Mizukami T, Yokoyama A, Shimoyama T, Nakayama T.

Sci Rep. 2016 Jun 13;6:27923. doi: 10.1038/srep27923.

42.

Vibrio ishigakensis sp. nov., in Halioticoli clade isolated from seawater in Okinawa coral reef area, Japan.

Gao F, Al-Saari N, Rohul Amin AK, Sato K, Mino S, Suda W, Oshima K, Hattori M, Ohkuma M, Hargreaves PI, Meirelles PM, Thompson FL, Thompson C, Gomez-Gil B, Sawabe T, Sawabe T.

Syst Appl Microbiol. 2016 Jul;39(5):330-5. doi: 10.1016/j.syapm.2016.04.002. Epub 2016 May 24. Erratum in: Syst Appl Microbiol. 2017 Dec;40(8):516.

PMID:
27262360
43.

Two FOXP3(+)CD4(+) T cell subpopulations distinctly control the prognosis of colorectal cancers.

Saito T, Nishikawa H, Wada H, Nagano Y, Sugiyama D, Atarashi K, Maeda Y, Hamaguchi M, Ohkura N, Sato E, Nagase H, Nishimura J, Yamamoto H, Takiguchi S, Tanoue T, Suda W, Morita H, Hattori M, Honda K, Mori M, Doki Y, Sakaguchi S.

Nat Med. 2016 Jun;22(6):679-84. doi: 10.1038/nm.4086. Epub 2016 Apr 25.

PMID:
27111280
44.

The gut microbiome of healthy Japanese and its microbial and functional uniqueness.

Nishijima S, Suda W, Oshima K, Kim SW, Hirose Y, Morita H, Hattori M.

DNA Res. 2016 Apr;23(2):125-33. doi: 10.1093/dnares/dsw002. Epub 2016 Mar 6.

45.

Individual Apostichopus japonicus fecal microbiome reveals a link with polyhydroxybutyrate producers in host growth gaps.

Yamazaki Y, Meirelles PM, Mino S, Suda W, Oshima K, Hattori M, Thompson FL, Sakai Y, Sawabe T, Sawabe T.

Sci Rep. 2016 Feb 24;6:21631. doi: 10.1038/srep21631.

46.

Draft Genome Sequence of Lactobacillus farciminis NBRC 111452, Isolated from Kôso, a Japanese Sugar-Vegetable Fermented Beverage.

Chiou TY, Oshima K, Suda W, Hattori M, Takahashi T.

Genome Announc. 2016 Jan 14;4(1). pii: e01514-15. doi: 10.1128/genomeA.01514-15.

47.

Major Anaerobic Bacteria Responsible for the Production of Carcinogenic Acetaldehyde from Ethanol in the Colon and Rectum.

Tsuruya A, Kuwahara A, Saito Y, Yamaguchi H, Tenma N, Inai M, Takahashi S, Tsutsumi E, Suwa Y, Totsuka Y, Suda W, Oshima K, Hattori M, Mizukami T, Yokoyama A, Shimoyama T, Nakayama T.

Alcohol Alcohol. 2016 Jul;51(4):395-401. doi: 10.1093/alcalc/agv135. Epub 2016 Jan 11.

PMID:
26755640
48.

First microbiota assessments of children's paddling pool waters evaluated using 16S rRNA gene-based metagenome analysis.

Sawabe T, Suda W, Ohshima K, Hattori M, Sawabe T.

J Infect Public Health. 2016 May-Jun;9(3):362-5. doi: 10.1016/j.jiph.2015.11.008. Epub 2015 Dec 3.

49.

Polymicrobial Amniotic Fluid Infection with Mycoplasma/Ureaplasma and Other Bacteria Induces Severe Intra-Amniotic Inflammation Associated with Poor Perinatal Prognosis in Preterm Labor.

Yoneda N, Yoneda S, Niimi H, Ueno T, Hayashi S, Ito M, Shiozaki A, Urushiyama D, Hata K, Suda W, Hattori M, Kigawa M, Kitajima I, Saito S.

Am J Reprod Immunol. 2016 Feb;75(2):112-25. doi: 10.1111/aji.12456. Epub 2015 Dec 15.

PMID:
26668114
50.

Th17 Cell Induction by Adhesion of Microbes to Intestinal Epithelial Cells.

Atarashi K, Tanoue T, Ando M, Kamada N, Nagano Y, Narushima S, Suda W, Imaoka A, Setoyama H, Nagamori T, Ishikawa E, Shima T, Hara T, Kado S, Jinnohara T, Ohno H, Kondo T, Toyooka K, Watanabe E, Yokoyama S, Tokoro S, Mori H, Noguchi Y, Morita H, Ivanov II, Sugiyama T, Nuñez G, Camp JG, Hattori M, Umesaki Y, Honda K.

Cell. 2015 Oct 8;163(2):367-80. doi: 10.1016/j.cell.2015.08.058. Epub 2015 Sep 24.

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