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Items: 1 to 50 of 861

1.

Activity-by-contact model of enhancer-promoter regulation from thousands of CRISPR perturbations.

Fulco CP, Nasser J, Jones TR, Munson G, Bergman DT, Subramanian V, Grossman SR, Anyoha R, Doughty BR, Patwardhan TA, Nguyen TH, Kane M, Perez EM, Durand NC, Lareau CA, Stamenova EK, Aiden EL, Lander ES, Engreitz JM.

Nat Genet. 2019 Dec;51(12):1664-1669. doi: 10.1038/s41588-019-0538-0. Epub 2019 Nov 29.

PMID:
31784727
2.

Self-Assembly and Neurotoxicity of β-Amyloid (21-40) Peptide Fragment: The Regulatory Role of GxxxG Motifs.

Sarkar D, Chakraborty I, Condorelli M, Ghosh B, Mass T, Weingarth M, Mandal AK, La Rosa C, Subramanian V, Bhunia A.

ChemMedChem. 2019 Nov 24. doi: 10.1002/cmdc.201900620. [Epub ahead of print]

PMID:
31762186
3.

Variation in post-colonoscopy colorectal cancer across colonoscopy providers in English National Health Service: population based cohort study.

Burr NE, Derbyshire E, Taylor J, Whalley S, Subramanian V, Finan PJ, Rutter MD, Valori R, Morris EJA.

BMJ. 2019 Nov 13;367:l6090. doi: 10.1136/bmj.l6090.

4.

Identification and structural characterization of four novel degradation products and a process impurity of isavuconazonium sulfate for injection formulation bulk by LC-ESI-QTOF-MS/MS.

Regella VRPS, Subramanian VC, Bhetanabhotla SS.

Eur J Mass Spectrom (Chichester). 2019 Nov 10:1469066719884402. doi: 10.1177/1469066719884402. [Epub ahead of print] No abstract available.

PMID:
31707848
5.

Role of Graphitic Nitrogen and π-Conjugated Functional Groups in Selective Oxidation of Alcohols: A DFT based Mechanistic Elucidation.

Kumar Choutipalli VS, Subramanian V.

Chem Asian J. 2019 Dec 13;14(24):4798-4806. doi: 10.1002/asia.201901062. Epub 2019 Nov 6.

PMID:
31637853
6.

Stability-indicating RP-HPLC method development and validation for determination of nine impurities in apixaban tablet dosage forms. Robustness study by quality by design approach.

Subramanian VB, Katari NK, Dongala T, Jonnalagadda SB.

Biomed Chromatogr. 2019 Oct 21:e4719. doi: 10.1002/bmc.4719. [Epub ahead of print]

PMID:
31634417
7.

Toward Explainable Anticancer Compound Sensitivity Prediction via Multimodal Attention-Based Convolutional Encoders.

Manica M, Oskooei A, Born J, Subramanian V, Sáez-Rodríguez J, Rodríguez Martínez M.

Mol Pharm. 2019 Oct 31. doi: 10.1021/acs.molpharmaceut.9b00520. [Epub ahead of print]

PMID:
31618586
8.

Unraveling the Unbinding Pathways of Products Formed in Catalytic Reactions Involved in SIRT1-3: A Random Acceleration Molecular Dynamics Simulation Study.

Muvva C, Murugan NA, Kumar Choutipalli VS, Subramanian V.

J Chem Inf Model. 2019 Oct 28;59(10):4100-4115. doi: 10.1021/acs.jcim.9b00513. Epub 2019 Oct 9.

PMID:
31553614
9.

Signatures of cell death and proliferation in perturbation transcriptomics data-from confounding factor to effective prediction.

Szalai B, Subramanian V, Holland CH, Alföldi R, Puskás LG, Saez-Rodriguez J.

Nucleic Acids Res. 2019 Nov 4;47(19):10010-10026. doi: 10.1093/nar/gkz805.

10.

Discussion.

Swain JA, Rich JB, Mehaffey JH, Subramanian VA, Bilfinger TV, Shahian DM.

J Thorac Cardiovasc Surg. 2019 Sep 19. pii: S0022-5223(19)31631-9. doi: 10.1016/j.jtcvs.2019.06.107. [Epub ahead of print] No abstract available.

PMID:
31543308
11.

Crystal structure of peptide-bound neprilysin reveals key binding interactions.

Moss S, Subramanian V, Acharya KR.

FEBS Lett. 2019 Sep 12. doi: 10.1002/1873-3468.13602. [Epub ahead of print]

PMID:
31514225
12.

miR-146a Deficiency Accelerates Hepatic Inflammation Without Influencing Diet-induced Obesity in Mice.

Javidan A, Jiang W, Okuyama M, Thiagarajan D, Yang L, Moorleghen JJ, Muniappan L, Subramanian V.

Sci Rep. 2019 Sep 2;9(1):12626. doi: 10.1038/s41598-019-49090-4.

13.

Experimental and Theoretical Investigations of Different Diketopyrrolopyrrole-Based Polymers.

Murugan P, Raghavendra V, Chithiravel S, Krishnamoorthy K, Mandal AB, Subramanian V, Samanta D.

ACS Omega. 2018 Sep 24;3(9):11710-11717. doi: 10.1021/acsomega.8b01132. eCollection 2018 Sep 30.

14.

Exploring Multifunctional Applications of Hexagonal Boron Arsenide Sheet: A DFT Study.

Manoharan K, Subramanian V.

ACS Omega. 2018 Aug 20;3(8):9533-9543. doi: 10.1021/acsomega.8b00946. eCollection 2018 Aug 31.

15.

Ferredoxin5 Deletion Affects Metabolism of Algae during the Different Phases of Sulfur Deprivation.

Subramanian V, Wecker MSA, Gerritsen A, Boehm M, Xiong W, Wachter B, Dubini A, González-Ballester D, Antonio RV, Ghirardi ML.

Plant Physiol. 2019 Oct;181(2):426-441. doi: 10.1104/pp.19.00457. Epub 2019 Jul 26.

PMID:
31350361
16.

Monte Carlo simulation of an HPGe detector for detection of 239Pu in waste assay system.

Pavan Narayanam S, Manohari M, Ramar R, Subramanian V, Mathiyarasu R, Srinivas CV, Baskaran R.

Appl Radiat Isot. 2019 Oct;152:127-134. doi: 10.1016/j.apradiso.2019.07.003. Epub 2019 Jul 3.

PMID:
31299449
17.

Realization of Bidirectional, Bandwidth-Enhanced Metamaterial Absorber for Microwave Applications.

Stephen L, Yogesh N, Subramanian V.

Sci Rep. 2019 Jul 11;9(1):10058. doi: 10.1038/s41598-019-46464-6.

18.

Controlling the risks of nano-enabled products through the life cycle: The case of nano copper oxide paint for wood protection and nano-pigments used in the automotive industry.

Semenzin E, Subramanian V, Pizzol L, Zabeo A, Fransman W, Oksel C, Hristozov D, Marcomini A.

Environ Int. 2019 Oct;131:104901. doi: 10.1016/j.envint.2019.06.011. Epub 2019 Jul 4.

19.

Author Correction: Evasion of immunosurveillance by genomic alterations of PPARγ/RXRα in bladder cancer.

Korpal M, Puyang X, Wu ZJ, Seiler R, Furman C, Oo HZ, Seiler M, Irwin S, Subramanian V, Joshi JJ, Wang CK, Rimkunas V, Tortora D, Yang H, Kumar N, Kuznetsov G, Matijevic M, Chow J, Kumar P, Zou J, Feala J, Corson L, Henry R, Selvaraj A, Davis A, Bloudoff K, Douglas J, Kiss B, Roberts M, Fazli L, Black PC, Fekkes P, Smith PG, Warmuth M, Yu L, Hao MH, Larsen N, Daugaard M, Zhu P.

Nat Commun. 2019 Jun 4;10(1):2527. doi: 10.1038/s41467-019-10666-3.

20.

The secretion of the angiogenic and neurotrophic factor angiogenin is COPII and microtubule dependent.

Ferguson R, Subramanian V.

Exp Cell Res. 2019 Aug 15;381(2):265-279. doi: 10.1016/j.yexcr.2019.05.025. Epub 2019 May 22.

PMID:
31128105
21.

New horizon in C1 chemistry: breaking the selectivity limitation in transformation of syngas and hydrogenation of CO2 into hydrocarbon chemicals and fuels.

Zhou W, Cheng K, Kang J, Zhou C, Subramanian V, Zhang Q, Wang Y.

Chem Soc Rev. 2019 Jun 17;48(12):3193-3228. doi: 10.1039/c8cs00502h. Review.

PMID:
31106785
22.

Living Donor Liver Transplant for Hepatocellular Carcinoma.

Subramanian V, Chapman W.

Ann Surg Oncol. 2019 Jun;26(6):1594-1595. doi: 10.1245/s10434-019-07250-w. Epub 2019 Apr 1. No abstract available.

PMID:
30937661
23.

Mice with a conditional deletion of Talpid3 (KIAA0586) - a model for Joubert syndrome.

Bashford AL, Subramanian V.

J Pathol. 2019 Aug;248(4):396-408. doi: 10.1002/path.5271. Epub 2019 May 16.

24.

Printed flexible and transparent electronics: enhancing low-temperature processed metal oxides with 0D and 1D nanomaterials.

Scheideler W, Subramanian V.

Nanotechnology. 2019 Jul 5;30(27):272001. doi: 10.1088/1361-6528/ab1167. Epub 2019 Mar 20.

PMID:
30893670
25.

Identification of transmembrane protein 237 as a novel interactor with the intestinal riboflavin transporter-3 (RFVT-3): role in functionality and cell biology.

Sabui S, Subramanian VS, Pham Q, Said HM.

Am J Physiol Cell Physiol. 2019 Jun 1;316(6):C805-C814. doi: 10.1152/ajpcell.00029.2019. Epub 2019 Mar 20.

PMID:
30892938
26.

Commissioning of portal dosimetry using a novel method for flattening filter-free photon beam in a nontrue beam linear accelerator.

Gandhi A, Vellaiyan S, Subramanian VS, Shanmugam T, Murugesan K, Subramanian K.

J Cancer Res Ther. 2019 Jan-Mar;15(1):223-230. doi: 10.4103/jcrt.JCRT_1181_16.

27.

Modeling the Cooperative Adsorption of Solid-Binding Proteins on Silica: Molecular Insights from Surface Plasmon Resonance Measurements.

Hellner B, Lee SB, Subramaniam A, Subramanian VR, Baneyx F.

Langmuir. 2019 Apr 9;35(14):5013-5020. doi: 10.1021/acs.langmuir.9b00283. Epub 2019 Mar 26.

PMID:
30869906
28.

Reflecting on the SCENIC recommendations for chromoendoscopy and targeted biopsy.

Soetikno R, Nguyen-Vu T, Subramanian V, Kaltenbach T.

Lancet Gastroenterol Hepatol. 2019 Apr;4(4):262-264. doi: 10.1016/S2468-1253(19)30043-3. No abstract available.

PMID:
30860062
29.

SyLMAND: a microfabrication beamline with wide spectral and beam power tuning range at the Canadian Light Source.

Wells G, Achenbach S, Subramanian V, Jacobs M, Klymyshyn D, Iyer S, Moazed B, Hanson J, Shen C, Haluzan D.

J Synchrotron Radiat. 2019 Mar 1;26(Pt 2):565-570. doi: 10.1107/S1600577518017721. Epub 2019 Feb 12.

PMID:
30855269
30.

Antinociceptive effect of flavonol and a few structurally related dimethoxy flavonols in mice.

Sayeli V, Nadipelly J, Kadhirvelu P, Cheriyan BV, Shanmugasundaram J, Subramanian V.

Inflammopharmacology. 2019 Dec;27(6):1155-1167. doi: 10.1007/s10787-019-00579-4. Epub 2019 Mar 8.

PMID:
30850920
31.

Optimal-Transport Analysis of Single-Cell Gene Expression Identifies Developmental Trajectories in Reprogramming.

Schiebinger G, Shu J, Tabaka M, Cleary B, Subramanian V, Solomon A, Gould J, Liu S, Lin S, Berube P, Lee L, Chen J, Brumbaugh J, Rigollet P, Hochedlinger K, Jaenisch R, Regev A, Lander ES.

Cell. 2019 Mar 7;176(6):1517. doi: 10.1016/j.cell.2019.02.026. No abstract available.

32.

Persistent DNA-break potential near telomeres increases initiation of meiotic recombination on short chromosomes.

Subramanian VV, Zhu X, Markowitz TE, Vale-Silva LA, San-Segundo PA, Hollingsworth NM, Keeney S, Hochwagen A.

Nat Commun. 2019 Feb 27;10(1):970. doi: 10.1038/s41467-019-08875-x.

33.

Heparin-binding EGF-like growth factor (HB-EGF) antisense oligonucleotide protected against hyperlipidemia-associated atherosclerosis.

Kim S, Graham MJ, Lee RG, Yang L, Kim S, Subramanian V, Layne JD, Cai L, Temel RE, Shih D, Lusis AJ, Berliner JA, Lee S.

Nutr Metab Cardiovasc Dis. 2019 Mar;29(3):306-315. doi: 10.1016/j.numecd.2018.12.006. Epub 2019 Jan 9.

PMID:
30738642
34.

Optimal-Transport Analysis of Single-Cell Gene Expression Identifies Developmental Trajectories in Reprogramming.

Schiebinger G, Shu J, Tabaka M, Cleary B, Subramanian V, Solomon A, Gould J, Liu S, Lin S, Berube P, Lee L, Chen J, Brumbaugh J, Rigollet P, Hochedlinger K, Jaenisch R, Regev A, Lander ES.

Cell. 2019 Feb 7;176(4):928-943.e22. doi: 10.1016/j.cell.2019.01.006. Epub 2019 Jan 31. Erratum in: Cell. 2019 Mar 7;176(6):1517.

PMID:
30712874
35.

The catalytic activity and secretion of zebrafish RNases are essential for their in vivo function in motor neurons and vasculature.

Ferguson R, Holloway DE, Chandrasekhar A, Acharya KR, Subramanian V.

Sci Rep. 2019 Feb 1;9(1):1107. doi: 10.1038/s41598-018-37140-2.

36.

Using Passive Smartphone Sensing for Improved Risk Stratification of Patients With Depression and Diabetes: Cross-Sectional Observational Study.

Sarda A, Munuswamy S, Sarda S, Subramanian V.

JMIR Mhealth Uhealth. 2019 Jan 29;7(1):e11041. doi: 10.2196/11041.

37.

Principles of Moisturizer Product Design

Lee C, Bajor J, Moaddel T, Subramanian V, Lee JM, Marrero D, Rocha S, Tharp MD.

J Drugs Dermatol. 2019 Jan 1;18(1s):s89-95. Review.

PMID:
30681817
38.

Theoretical Insights into the Role of Water Molecules in the Guanidinium-Based Protein Denaturation Process in Specific to Aromatic Amino Acids.

Balamurugan K, Prakash M, Subramanian V.

J Phys Chem B. 2019 Mar 14;123(10):2191-2202. doi: 10.1021/acs.jpcb.8b08968. Epub 2019 Feb 7.

PMID:
30672268
39.

Feasibility of a Low-Intensity, Technology-Based Intervention for Increasing Physical Activity in Adults at Risk for a Diabetic Foot Ulcer: A Mixed-Methods Study.

Schneider KL, Crews RT, Subramanian V, Moxley E, Hwang S, DiLiberto FE, Aylward L, Bean J, Yalla S.

J Diabetes Sci Technol. 2019 Sep;13(5):857-868. doi: 10.1177/1932296818822538. Epub 2019 Jan 18.

PMID:
30654641
40.

MicroRNA-103a regulates sodium-dependent vitamin C transporter-1 expression in intestinal epithelial cells.

Subramanian VS, Sabui S, Marchant JS, Said HM.

J Nutr Biochem. 2019 Mar;65:46-53. doi: 10.1016/j.jnutbio.2018.12.001. Epub 2018 Dec 7.

PMID:
30616065
41.

Persistent reduction of mitral regurgitation by implantation of a transannular mitral bridge: durability and effectiveness of the repair at 2 years-results of a prospective trial†.

Cerny S, Benesova M, Skalsky I, Patel NC, Subramanian VA.

Eur J Cardiothorac Surg. 2019 May 1;55(5):867-873. doi: 10.1093/ejcts/ezy423.

PMID:
30590416
42.

Decreasing Risk of First and Subsequent Surgeries in Patients With Crohn's Disease in England From 1994 through 2013.

Burr NE, Lord R, Hull MA, Subramanian V.

Clin Gastroenterol Hepatol. 2019 Sep;17(10):2042-2049.e4. doi: 10.1016/j.cgh.2018.12.022. Epub 2018 Dec 21.

PMID:
30583051
43.

BASELINE EVALUATION STUDY OF NATURALLY OCCURRING RADIONUCLIDES IN SOIL SAMPLES FROM VICINITY OF INDIA'S FIRST FAST REACTOR FUEL CYCLE FACILITY (FRFCF), DAE COMPLEX, KALPAKKAM, INDIA.

Bramha SN, Krishnan H, Subramanian V, Baskaran R, Venkatraman B.

Radiat Prot Dosimetry. 2019 Nov 30;185(1):87-95. doi: 10.1093/rpd/ncy262.

PMID:
30561717
44.

A multimodal (FACILE) classification for optical diagnosis of inflammatory bowel disease associated neoplasia.

Iacucci M, McQuaid K, Gui XS, Iwao Y, Lethebe BC, Lowerison M, Matsumoto T, Shivaji UN, Smith SCL, Subramanian V, Uraoka T, Sanduleanu S, Ghosh S, Kiesslich R.

Endoscopy. 2019 Feb;51(2):133-141. doi: 10.1055/a-0757-7759. Epub 2018 Dec 12.

PMID:
30541154
45.

Appearance of SERS activity in single silver nanoparticles by laser-induced reshaping.

Chaudhari K, Ahuja T, Murugesan V, Subramanian V, Ganayee MA, Thundat T, Pradeep T.

Nanoscale. 2018 Dec 20;11(1):321-330. doi: 10.1039/c8nr06497k.

PMID:
30534777
46.

Excited state C-N bond dissociation and cyclization of tri-aryl amine-based OLED materials: a theoretical investigation.

Vijaya Sundar J, Subramanian V, Rajakumar B.

Phys Chem Chem Phys. 2018 Dec 19;21(1):438-447. doi: 10.1039/c8cp06314a.

PMID:
30534719
47.

Hepatocellular carcinoma: Where are we in 2018?

Chapman WC, Korenblat KM, Fowler KJ, Saad N, Khan AS, Subramanian V, Doyle MBM, Dageforde LA, Tan B, Grierson P, Lin Y, Xu M, Brunt EM.

Curr Probl Surg. 2018 Nov;55(11):450-503. doi: 10.1067/j.cpsurg.2018.10.002. Epub 2018 Nov 1. Review. No abstract available.

PMID:
30526875
48.

Detection of scales and its thickness determination in industrial pipes using Compton backscattering system.

Margret M, Subramanian V, Baskaran R, Venkatraman B.

Rev Sci Instrum. 2018 Nov;89(11):113117. doi: 10.1063/1.5039579.

PMID:
30501299
49.
50.

C9orf72, a protein associated with amyotrophic lateral sclerosis (ALS) is a guanine nucleotide exchange factor.

Iyer S, Subramanian V, Acharya KR.

PeerJ. 2018 Oct 17;6:e5815. doi: 10.7717/peerj.5815. eCollection 2018.

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