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Epidermal growth factor receptor (EGFR) tyrosine kinase inhibitors in non-small cell lung cancer harboring uncommon EGFR mutations: Focus on afatinib.

Masood A, Kancha RK, Subramanian J.

Semin Oncol. 2019 Jun;46(3):271-283. doi: 10.1053/j.seminoncol.2019.08.004. Epub 2019 Sep 11. Review.


Matched Whole-Genome Sequencing (WGS) and Whole-Exome Sequencing (WES) of Tumor Tissue with Circulating Tumor DNA (ctDNA) Analysis: Complementary Modalities in Clinical Practice.

Imperial R, Nazer M, Ahmed Z, Kam AE, Pluard TJ, Bahaj W, Levy M, Kuzel TM, Hayden DM, Pappas SG, Subramanian J, Masood A.

Cancers (Basel). 2019 Sep 19;11(9). pii: E1399. doi: 10.3390/cancers11091399.


CPG15/Neuritin Mimics Experience in Selecting Excitatory Synapses for Stabilization by Facilitating PSD95 Recruitment.

Subramanian J, Michel K, Benoit M, Nedivi E.

Cell Rep. 2019 Aug 6;28(6):1584-1595.e5. doi: 10.1016/j.celrep.2019.07.012.


Emergence of ERBB2 Mutation as a Biomarker and an Actionable Target in Solid Cancers.

Subramanian J, Katta A, Masood A, Vudem DR, Kancha RK.

Oncologist. 2019 Jul 10. pii: theoncologist.2018-0845. doi: 10.1634/theoncologist.2018-0845. [Epub ahead of print] Review.


Epidermal growth factor receptor tyrosine kinase inhibitors for the treatment of non-small cell lung cancer.

Kujtan L, Subramanian J.

Expert Rev Anticancer Ther. 2019 Jul;19(7):547-559. doi: 10.1080/14737140.2019.1596030. Epub 2019 Jun 14.


The role of chemotherapy in the treatment of stage II nasopharyngeal carcinoma: Retrospective analysis of the national cancer database.

Ahmed Z, Kujtan L, Kennedy K, Wood V, Schomas D, Subramanian J.

Cancer Med. 2019 Apr;8(4):1500-1507. doi: 10.1002/cam4.2033. Epub 2019 Feb 21.


Reducing the number of unnecessary routine laboratory tests through education of internal medicine residents.

Faisal A, Andres K, Rind JAK, Das A, Alter D, Subramanian J, Koehler TJ, Parker J, Bernicchi N.

Postgrad Med J. 2018 Dec;94(1118):716-719. doi: 10.1136/postgradmedj-2018-135784. Epub 2019 Jan 22.


Comparative proteogenomic analysis of right-sided colon cancer, left-sided colon cancer and rectal cancer reveals distinct mutational profiles.

Imperial R, Ahmed Z, Toor OM, Erdoğan C, Khaliq A, Case P, Case J, Kennedy K, Cummings LS, Melton N, Raza S, Diri B, Mohammad R, El-Rayes B, Pluard T, Hussain A, Subramanian J, Masood A.

Mol Cancer. 2018 Dec 21;17(1):177. doi: 10.1186/s12943-018-0923-9.


Single Nucleotide Polymorphism-Based Noninvasive Prenatal Testing: Experience in India.

Verma IC, Puri R, Venkataswamy E, Tayal T, Nampoorthiri S, Andrew C, Kabra M, Bagga R, Gowda M, Batra M, Hegde S, Kaul A, Gupta N, Mishra P, Subramanian JG, Lingaiah S, Akhtar R, Kidangan F, Chandran R, Kiran C, Ravi Kumar GR, Ramprasad VL, Kadam P.

J Obstet Gynaecol India. 2018 Dec;68(6):462-470. doi: 10.1007/s13224-017-1061-9. Epub 2018 Jan 25.


Pyruvate Kinase Muscle-1 Expression Appears to Drive Lactogenic Behavior in CHO Cell Lines, Triggering Lower Viability and Productivity: A Case Study.

Tang D, Subramanian J, Haley B, Baker J, Luo L, Hsu W, Liu P, Sandoval W, Laird MW, Snedecor B, Shiratori M, Misaghi S.

Biotechnol J. 2019 Apr;14(4):e1800332. doi: 10.1002/biot.201800332. Epub 2018 Sep 16.


Correction: Performance of next-generation sequencing on small tumor specimens and/or low tumor content samples using a commercially available platform.

Morris SM, Subramanian J, Gel ES, Runger GC, Thompson EJ, Mallery DW, Weiss GJ.

PLoS One. 2018 Jun 28;13(6):e0200224. doi: 10.1371/journal.pone.0200224. eCollection 2018.


Survival outcomes post percutaneous coronary intervention: Why the hype about stent type? Lessons from a healthcare system in India.

Duggal B, Subramanian J, Duggal M, Singh P, Rajivlochan M, Saunik S, Desiraju K, Avhad A, Ram U, Sen S, Agrawal A.

PLoS One. 2018 May 24;13(5):e0196830. doi: 10.1371/journal.pone.0196830. eCollection 2018.


Performance of next-generation sequencing on small tumor specimens and/or low tumor content samples using a commercially available platform.

Morris SM, Subramanian J, Gel ES, Runger GC, Thompson EJ, Mallery DW, Weiss GJ.

PLoS One. 2018 Apr 27;13(4):e0196556. doi: 10.1371/journal.pone.0196556. eCollection 2018. Erratum in: PLoS One. 2018 Jun 28;13(6):e0200224.


Bevacizumab biosimilars: scientific justification for extrapolation of indications.

Melosky B, Reardon DA, Nixon AB, Subramanian J, Bair AH, Jacobs I.

Future Oncol. 2018 Oct;14(24):2507-2520. doi: 10.2217/fon-2018-0051. Epub 2018 Apr 25. Review.


The evolving genomic landscape in urothelial cancer.

Kujtan L, Hussain A, Subramanian J, Masood A.

Curr Opin Oncol. 2018 May;30(3):197-202. doi: 10.1097/CCO.0000000000000447. Review.


Correlation of Somatic Genomic Alterations Between Tissue Genomics and ctDNA Employing Next-Generation Sequencing: Analysis of Lung and Gastrointestinal Cancers.

Toor OM, Ahmed Z, Bahaj W, Boda U, Cummings LS, McNally ME, Kennedy KF, Pluard TJ, Hussain A, Subramanian J, Masood A.

Mol Cancer Ther. 2018 May;17(5):1123-1132. doi: 10.1158/1535-7163.MCT-17-1015. Epub 2018 Mar 2.


Leadership in anaesthesiology through mentoring.

Subramanian JB, Ravikumar U.

Indian J Anaesth. 2018 Jan;62(1):1-3. doi: 10.4103/ija.IJA_776_17. No abstract available.


The Role of Systemic Therapy in the Management of Stage I Large Cell Neuroendocrine Carcinoma of the Lung.

Kujtan L, Muthukumar V, Kennedy KF, Davis JR, Masood A, Subramanian J.

J Thorac Oncol. 2018 May;13(5):707-714. doi: 10.1016/j.jtho.2018.01.019. Epub 2018 Jan 31.


Short- and long-term effects on mAb-producing CHO cell lines after cryopreservation.

Subramanian J, Aulakh RPS, Grewal PS, Sanford M, Pynn AFJ, Yuk IH.

Biotechnol Prog. 2018 Mar;34(2):463-477. doi: 10.1002/btpr.2599. Epub 2018 Jan 21.


Comprehensive pancancer genomic analysis reveals (RTK)-RAS-RAF-MEK as a key dysregulated pathway in cancer: Its clinical implications.

Imperial R, Toor OM, Hussain A, Subramanian J, Masood A.

Semin Cancer Biol. 2019 Feb;54:14-28. doi: 10.1016/j.semcancer.2017.11.016. Epub 2017 Nov 22. Review.


Vesicle to micelle transition in the ternary mixture of L121/SDS/D2O: NMR, EPR and SANS studies.

Prameela GKS, Phani Kumar BVN, Reddy RR, Pan A, Subramanian J, Kumar S, Aswal VK, Kohlbrecher J, Mandal AB, Moulik SP.

Phys Chem Chem Phys. 2017 Dec 6;19(47):31747-31755. doi: 10.1039/c7cp06796h.


Phospholipase D inhibition by hexanal is associated with calcium signal transduction events in raspberry.

Kayal WE, Paliyath G, Sullivan JA, Subramanian J.

Hortic Res. 2017 Sep 13;4:17042. doi: 10.1038/hortres.2017.42. eCollection 2017.


Predictors for chemotherapy in early stage small cell lung carcinoma (SCLC): A National Cancer Database (NCDB) analysis.

Ahmed Z, Grover P, Kennedy KF, Masood A, Davis JR, Subramanian J.

Lung Cancer. 2017 Nov;113:85-87. doi: 10.1016/j.lungcan.2017.09.004. Epub 2017 Sep 13. No abstract available.


In Vivo Anti-Biofilm and Anti-Bacterial Non-Leachable Coating Thermally Polymerized on Cylindrical Catheter.

Zhou C, Wu Y, Thappeta KRV, Subramanian JTL, Pranantyo D, Kang ET, Duan H, Kline K, Chan-Park MB.

ACS Appl Mater Interfaces. 2017 Oct 18;9(41):36269-36280. doi: 10.1021/acsami.7b07053. Epub 2017 Oct 4.


Upregulation of Phosphatidylinositol 3-Kinase (PI3K) Enhances Ethylene Biosynthesis and Accelerates Flower Senescence in Transgenic Nicotiana tabacum L.

Dek MSP, Padmanabhan P, Sherif S, Subramanian J, Paliyath AG.

Int J Mol Sci. 2017 Jul 15;18(7). pii: E1533. doi: 10.3390/ijms18071533.


Rituximab in the treatment of follicular lymphoma: the future of biosimilars in the evolving therapeutic landscape.

Subramanian J, Cavenagh J, Desai B, Jacobs I.

Cancer Manag Res. 2017 Apr 24;9:131-140. doi: 10.2147/CMAR.S120589. eCollection 2017. Review.


Disparities in the Management of Patients With Stage I Small Cell Lung Carcinoma (SCLC): A Surveillance, Epidemiology and End Results (SEER) Analysis.

Ahmed Z, Kujtan L, Kennedy KF, Davis JR, Subramanian J.

Clin Lung Cancer. 2017 Sep;18(5):e315-e325. doi: 10.1016/j.cllc.2017.03.003. Epub 2017 Mar 30.


Genetic identification of marine eels through DNA barcoding from Parangipettai coastal waters.

Peninal S, Subramanian J, Elavarasi A, Kalaiselvam M.

Genom Data. 2016 Dec 9;11:81-84. doi: 10.1016/j.gdata.2016.12.002. eCollection 2017 Mar.


Filling the (SR)GAP in Excitatory/Inhibitory Balance.

Subramanian J, Nedivi E.

Neuron. 2016 Jul 20;91(2):205-7. doi: 10.1016/j.neuron.2016.07.008. Review.


The learning environment in professional doctorate and postgraduate dental education: a qualitative study.

Subramanian J, Thomson WM.

Eur J Dent Educ. 2017 Nov;21(4):261-271. doi: 10.1111/eje.12209. Epub 2016 May 28.


Opportunities to improve clinical summaries for patients at hospital discharge.

Sarzynski E, Hashmi H, Subramanian J, Fitzpatrick L, Polverento M, Simmons M, Brooks K, Given C.

BMJ Qual Saf. 2017 May;26(5):372-380. doi: 10.1136/bmjqs-2015-005201. Epub 2016 May 6.


Inhibitory Synapses Are Repeatedly Assembled and Removed at Persistent Sites In Vivo.

Villa KL, Berry KP, Subramanian J, Cha JW, Chan Oh W, Kwon HB, Kubota Y, So PT, Nedivi E.

Neuron. 2016 May 4;90(3):662-664. doi: 10.1016/j.neuron.2016.03.035. No abstract available.


The Bayesian basket design for genomic variant-driven phase II trials.

Simon R, Geyer S, Subramanian J, Roychowdhury S.

Semin Oncol. 2016 Feb;43(1):13-18. doi: 10.1053/j.seminoncol.2016.01.002. Epub 2016 Jan 18.


Population pharmacokinetic analysis to identify the possibility of interaction between anti-cancer agents.

Subramanian J, Damre A, Rohatagi S.

Indian J Cancer. 2015 Jul-Sep;52(3):461-5. doi: 10.4103/0019-509X.176692.


Inhibitory Synapses Are Repeatedly Assembled and Removed at Persistent Sites In Vivo.

Villa KL, Berry KP, Subramanian J, Cha JW, Oh WC, Kwon HB, Kubota Y, So PT, Nedivi E.

Neuron. 2016 Feb 17;89(4):756-69. doi: 10.1016/j.neuron.2016.01.010. Epub 2016 Feb 4. Erratum in: Neuron. 2016 May 4;90(3):662-664.


Laparoscopic Nissen Rossetti fundoplication: Possibility towards day care anti-reflux surgeries.

Bharatam KK, Raj R, Subramanian JB, Vasudevan A, Bodduluri S, Sriraman KB, Abineshwar NJ.

Ann Med Surg (Lond). 2015 Oct 14;4(4):384-7. doi: 10.1016/j.amsu.2015.10.005. eCollection 2015 Dec.


Physicochemical perspectives (aggregation, structure and dynamics) of interaction between pluronic (L31) and surfactant (SDS).

Prameela GK, Phani Kumar BV, Pan A, Aswal VK, Subramanian J, Mandal AB, Moulik SP.

Phys Chem Chem Phys. 2015 Nov 11;17(45):30560-9. doi: 10.1039/c5cp04910e.


Editorial: Homeostatic and retrograde signaling mechanisms modulating presynaptic function and plasticity.

Subramanian J, Dickman D.

Front Cell Neurosci. 2015 Sep 30;9:380. doi: 10.3389/fncel.2015.00380. eCollection 2015. No abstract available.


Development of biosimilars in an era of oncologic drug shortages.

Li E, Subramanian J, Anderson S, Thomas D, McKinley J, Jacobs IA.

Drug Des Devel Ther. 2015 Jun 24;9:3247-55. doi: 10.2147/DDDT.S75219. eCollection 2015. Review.


More similar than different: Host cell protein production using three null CHO cell lines.

Yuk IH, Nishihara J, Walker D Jr, Huang E, Gunawan F, Subramanian J, Pynn AF, Yu XC, Zhu-Shimoni J, Vanderlaan M, Krawitz DC.

Biotechnol Bioeng. 2015 Oct;112(10):2068-83. doi: 10.1002/bit.25615. Epub 2015 May 12.


Non-descanned multifocal multiphoton microscopy with a multianode photomultiplier tube.

Cha JW, Yew EY, Kim D, Subramanian J, Nedivi E, So PT.

AIP Adv. 2015 Mar 23;5(8):084802. eCollection 2015 Aug.


Complex formation of blueberry (Vaccinium angustifolium) anthocyanins during freeze-drying and its influence on their biological activity.

Correa-Betanzo J, Padmanabhan P, Corredig M, Subramanian J, Paliyath G.

J Agric Food Chem. 2015 Mar 25;63(11):2935-46. doi: 10.1021/acs.jafc.5b00016. Epub 2015 Mar 13.


Protein kinase A (PknA) of Mycobacterium tuberculosis is independently activated and is critical for growth in vitro and survival of the pathogen in the host.

Nagarajan SN, Upadhyay S, Chawla Y, Khan S, Naz S, Subramanian J, Gandotra S, Nandicoori VK.

J Biol Chem. 2015 Apr 10;290(15):9626-45. doi: 10.1074/jbc.M114.611822. Epub 2015 Feb 20.


An integrated breast cancer risk assessment and management model based on fuzzy cognitive maps.

Subramanian J, Karmegam A, Papageorgiou E, Papandrianos N, Vasukie A.

Comput Methods Programs Biomed. 2015 Mar;118(3):280-97. doi: 10.1016/j.cmpb.2015.01.001. Epub 2015 Jan 21.


Spectral-resolved multifocal multiphoton microscopy with multianode photomultiplier tubes.

Cha JW, Tzeranis D, Subramanian J, Yannas IV, Nedivi E, So PT.

Opt Express. 2014 Sep 8;22(18):21368-81. doi: 10.1364/OE.22.021368.


Comparison of effects of anti-angiogenic agents in the zebrafish efficacy-toxicity model for translational anti-angiogenic drug discovery.

Chimote G, Sreenivasan J, Pawar N, Subramanian J, Sivaramakrishnan H, Sharma S.

Drug Des Devel Ther. 2014 Aug 19;8:1107-23. doi: 10.2147/DDDT.S55621. eCollection 2014.


Reassignment of scattered emission photons in multifocal multiphoton microscopy.

Cha JW, Singh VR, Kim KH, Subramanian J, Peng Q, Yu H, Nedivi E, So PT.

Sci Rep. 2014 Jun 5;4:5153. doi: 10.1038/srep05153.


Aberrant development and plasticity of excitatory visual cortical networks in the absence of cpg15.

Picard N, Leslie JH, Trowbridge SK, Subramanian J, Nedivi E, Fagiolini M.

J Neurosci. 2014 Mar 5;34(10):3517-22. doi: 10.1523/JNEUROSCI.2955-13.2014.


Shape selectivity and remapping in dorsal stream visual area LIP.

Subramanian J, Colby CL.

J Neurophysiol. 2014 Feb;111(3):613-27. doi: 10.1152/jn.00841.2011. Epub 2013 Nov 13.


DGIdb: mining the druggable genome.

Griffith M, Griffith OL, Coffman AC, Weible JV, McMichael JF, Spies NC, Koval J, Das I, Callaway MB, Eldred JM, Miller CA, Subramanian J, Govindan R, Kumar RD, Bose R, Ding L, Walker JR, Larson DE, Dooling DJ, Smith SM, Ley TJ, Mardis ER, Wilson RK.

Nat Methods. 2013 Dec;10(12):1209-10. doi: 10.1038/nmeth.2689. Epub 2013 Oct 13.

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