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Items: 1 to 50 of 158

1.

A Toolkit for High Resolution Imaging of Cell Division and Phytohormone Signaling in Legume Roots and Root Nodules.

Nadzieja M, Stougaard J, Reid D.

Front Plant Sci. 2019 Aug 2;10:1000. doi: 10.3389/fpls.2019.01000. eCollection 2019.

2.

Atypical Receptor Kinase RINRK1 Required for Rhizobial Infection but not Nodule Development in Lotus japonicus.

Li X, Zheng Z, Kong X, Xu J, Qiu L, Sun J, Reid DE, Jin H, Andersen SU, Oldroyd GED, Stougaard J, Downie JA, Xie F.

Plant Physiol. 2019 Aug 13. pii: pp.00509.2019. doi: 10.1104/pp.19.00509. [Epub ahead of print]

PMID:
31409696
3.

A Lotus japonicus cytoplasmic kinase connects Nod factor perception by the NFR5 LysM receptor to nodulation.

Wong JEMM, Nadzieja M, Madsen LH, Bücherl CA, Dam S, Sandal NN, Couto D, Derbyshire P, Uldum-Berentsen M, Schroeder S, Schwämmle V, Nogueira FCS, Asmussen MH, Thirup S, Radutoiu S, Blaise M, Andersen KR, Menke FLH, Zipfel C, Stougaard J.

Proc Natl Acad Sci U S A. 2019 Jul 9;116(28):14339-14348. doi: 10.1073/pnas.1815425116. Epub 2019 Jun 25.

4.

Characterizing standard genetic parts and establishing common principles for engineering legume and cereal roots.

Feike D, Korolev AV, Soumpourou E, Murakami E, Reid D, Breakspear A, Rogers C, Radutoiu S, Stougaard J, Harwood WA, Oldroyd GED, Miller JB.

Plant Biotechnol J. 2019 Apr 25. doi: 10.1111/pbi.13135. [Epub ahead of print]

5.

The antifibrotic drug pirfenidone inhibits spondyloarthritis fibroblast-like synoviocytes and osteoblasts in vitro.

Stougaard J, Lomholt S, Ommen P, Kelsen J, Kragstrup TW.

BMC Rheumatol. 2018 Nov 19;2:33. doi: 10.1186/s41927-018-0040-9. eCollection 2018.

6.

Sinorhizobium fredii HH103 nolR and nodD2 mutants gain capacity for infection thread invasion of Lotus japonicus Gifu and Lotus burttii.

Acosta-Jurado S, Rodríguez-Navarro DN, Kawaharada Y, Rodríguez-Carvajal MA, Gil-Serrano A, Soria-Díaz ME, Pérez-Montaño F, Fernández-Perea J, Niu Y, Alias-Villegas C, Jiménez-Guerrero I, Navarro-Gómez P, López-Baena FJ, Kelly S, Sandal N, Stougaard J, Ruiz-Sainz JE, Vinardell JM.

Environ Microbiol. 2019 May;21(5):1718-1739. doi: 10.1111/1462-2920.14584. Epub 2019 Mar 20.

PMID:
30839140
7.

Author Correction: Intestinal microbiome adjusts the innate immune setpoint during colonization through negative regulation of MyD88.

Koch BEV, Yang S, Lamers G, Stougaard J, Spaink HP.

Nat Commun. 2019 Jan 28;10(1):526. doi: 10.1038/s41467-019-08456-y.

8.

Intestinal microbiome adjusts the innate immune setpoint during colonization through negative regulation of MyD88.

Koch BEV, Yang S, Lamers G, Stougaard J, Spaink HP.

Nat Commun. 2018 Oct 5;9(1):4099. doi: 10.1038/s41467-018-06658-4. Erratum in: Nat Commun. 2019 Jan 28;10(1):526.

9.

Distinct Lotus japonicus Transcriptomic Responses to a Spectrum of Bacteria Ranging From Symbiotic to Pathogenic.

Kelly S, Mun T, Stougaard J, Ben C, Andersen SU.

Front Plant Sci. 2018 Aug 20;9:1218. doi: 10.3389/fpls.2018.01218. eCollection 2018.

10.

Systemic control of legume susceptibility to rhizobial infection by a mobile microRNA.

Tsikou D, Yan Z, Holt DB, Abel NB, Reid DE, Madsen LH, Bhasin H, Sexauer M, Stougaard J, Markmann K.

Science. 2018 Oct 12;362(6411):233-236. doi: 10.1126/science.aat6907. Epub 2018 Aug 30.

PMID:
30166437
11.

A genetic screen for plant mutants with altered nodulation phenotypes in response to rhizobial glycan mutants.

Liu H, Sandal N, Andersen KR, James EK, Stougaard J, Kelly S, Kawaharada Y.

New Phytol. 2018 Oct;220(2):526-538. doi: 10.1111/nph.15293. Epub 2018 Jun 30.

PMID:
29959893
12.

Epidermal LysM receptor ensures robust symbiotic signalling in Lotus japonicus.

Murakami E, Cheng J, Gysel K, Bozsoki Z, Kawaharada Y, Hjuler CT, Sørensen KK, Tao K, Kelly S, Venice F, Genre A, Thygesen MB, Jong N, Vinther M, Jensen DB, Jensen KJ, Blaise M, Madsen LH, Andersen KR, Stougaard J, Radutoiu S.

Elife. 2018 Jun 29;7. pii: e33506. doi: 10.7554/eLife.33506.

13.

Epidermal auxin biosynthesis facilitates rhizobial infection in Lotus japonicus.

Nadzieja M, Kelly S, Stougaard J, Reid D.

Plant J. 2018 Jul;95(1):101-111. doi: 10.1111/tpj.13934. Epub 2018 May 20.

14.

Structures of exopolysaccharides involved in receptor-mediated perception of Mesorhizobium loti by Lotus japonicas.

Muszyński A, Heiss C, Hjuler CT, Sullivan JT, Kelly SJ, Thygesen MB, Stougaard J, Azadi P, Carlson RW, Ronson CW.

J Biol Chem. 2018 Apr 6;293(14):5376. doi: 10.1074/jbc.AAC118.002877. No abstract available.

PMID:
29626109
Free PMC Article
15.

Regulation of Nod factor biosynthesis by alternative NodD proteins at distinct stages of symbiosis provides additional compatibility scrutiny.

Kelly S, Sullivan JT, Kawaharada Y, Radutoiu S, Ronson CW, Stougaard J.

Environ Microbiol. 2018 Jan;20(1):97-110. doi: 10.1111/1462-2920.14006. Epub 2018 Jan 3.

PMID:
29194913
16.

Dynamics of Ethylene Production in Response to Compatible Nod Factor.

Reid D, Liu H, Kelly S, Kawaharada Y, Mun T, Andersen SU, Desbrosses G, Stougaard J.

Plant Physiol. 2018 Feb;176(2):1764-1772. doi: 10.1104/pp.17.01371. Epub 2017 Nov 29.

17.

LYS12 LysM receptor decelerates Phytophthora palmivora disease progression in Lotus japonicus.

Fuechtbauer W, Yunusov T, Bozsóki Z, Gavrin A, James EK, Stougaard J, Schornack S, Radutoiu S.

Plant J. 2018 Jan;93(2):297-310. doi: 10.1111/tpj.13785. Epub 2017 Dec 22.

18.

Preparation of glycoconjugates from unprotected carbohydrates for protein-binding studies.

Hjuler CT, Maolanon NN, Sauer J, Stougaard J, Thygesen MB, Jensen KJ.

Nat Protoc. 2017 Nov;12(11):2411-2422. doi: 10.1038/nprot.2017.109. Epub 2017 Oct 26.

PMID:
29072708
19.

Receptor-mediated chitin perception in legume roots is functionally separable from Nod factor perception.

Bozsoki Z, Cheng J, Feng F, Gysel K, Vinther M, Andersen KR, Oldroyd G, Blaise M, Radutoiu S, Stougaard J.

Proc Natl Acad Sci U S A. 2017 Sep 19;114(38):E8118-E8127. doi: 10.1073/pnas.1706795114. Epub 2017 Sep 5.

20.

Legume LysM receptors mediate symbiotic and pathogenic signalling.

Kelly S, Radutoiu S, Stougaard J.

Curr Opin Plant Biol. 2017 Oct;39:152-158. doi: 10.1016/j.pbi.2017.06.013. Epub 2017 Aug 5. Review.

PMID:
28787662
21.

Cytokinin Biosynthesis Promotes Cortical Cell Responses during Nodule Development.

Reid D, Nadzieja M, Novák O, Heckmann AB, Sandal N, Stougaard J.

Plant Physiol. 2017 Sep;175(1):361-375. doi: 10.1104/pp.17.00832. Epub 2017 Jul 21.

22.

User Guide for the LORE1 Insertion Mutant Resource.

Mun T, Małolepszy A, Sandal N, Stougaard J, Andersen SU.

Methods Mol Biol. 2017;1610:13-23. doi: 10.1007/978-1-4939-7003-2_2.

PMID:
28439854
23.

N-glycan maturation mutants in Lotus japonicus for basic and applied glycoprotein research.

Pedersen CT, Loke I, Lorentzen A, Wolf S, Kamble M, Kristensen SK, Munch D, Radutoiu S, Spillner E, Roepstorff P, Thaysen-Andersen M, Stougaard J, Dam S.

Plant J. 2017 Aug;91(3):394-407. doi: 10.1111/tpj.13570. Epub 2017 May 22.

24.

SNOWY COTYLEDON 2 Promotes Chloroplast Development and Has a Role in Leaf Variegation in Both Lotus japonicus and Arabidopsis thaliana.

Zagari N, Sandoval-Ibañez O, Sandal N, Su J, Rodriguez-Concepcion M, Stougaard J, Pribil M, Leister D, Pulido P.

Mol Plant. 2017 May 1;10(5):721-734. doi: 10.1016/j.molp.2017.02.009. Epub 2017 Mar 10.

25.

Differential regulation of the Epr3 receptor coordinates membrane-restricted rhizobial colonization of root nodule primordia.

Kawaharada Y, Nielsen MW, Kelly S, James EK, Andersen KR, Rasmussen SR, Füchtbauer W, Madsen LH, Heckmann AB, Radutoiu S, Stougaard J.

Nat Commun. 2017 Feb 23;8:14534. doi: 10.1038/ncomms14534.

26.

The Ethylene Responsive Factor Required for Nodulation 1 (ERN1) Transcription Factor Is Required for Infection-Thread Formation in Lotus japonicus.

Kawaharada Y, James EK, Kelly S, Sandal N, Stougaard J.

Mol Plant Microbe Interact. 2017 Mar;30(3):194-204. doi: 10.1094/MPMI-11-16-0237-R. Epub 2017 Mar 3.

27.

Lotus Base: An integrated information portal for the model legume Lotus japonicus.

Mun T, Bachmann A, Gupta V, Stougaard J, Andersen SU.

Sci Rep. 2016 Dec 23;6:39447. doi: 10.1038/srep39447.

28.

Sinorhizobium fredii HH103 Invades Lotus burttii by Crack Entry in a Nod Factor-and Surface Polysaccharide-Dependent Manner.

Acosta-Jurado S, Rodríguez-Navarro DN, Kawaharada Y, Perea JF, Gil-Serrano A, Jin H, An Q, Rodríguez-Carvajal MA, Andersen SU, Sandal N, Stougaard J, Vinardell JM, Ruiz-Sainz JE.

Mol Plant Microbe Interact. 2016 Dec;29(12):925-937. doi: 10.1094/MPMI-09-16-0195-R. Epub 2016 Dec 16.

29.

Structures of Exopolysaccharides Involved in Receptor-mediated Perception of Mesorhizobium loti by Lotus japonicus.

Muszyński A, Heiss C, Hjuler CT, Sullivan JT, Kelly SJ, Thygesen MB, Stougaard J, Azadi P, Carlson RW, Ronson CW.

J Biol Chem. 2016 Sep 30;291(40):20946-20961. Epub 2016 Aug 8. Erratum in: J Biol Chem. 2018 Apr 6;293(14 ):5376.

30.

Hemoglobin LjGlb1-1 is involved in nodulation and regulates the level of nitric oxide in the Lotus japonicus-Mesorhizobium loti symbiosis.

Fukudome M, Calvo-Begueria L, Kado T, Osuki K, Rubio MC, Murakami E, Nagata M, Kucho K, Sandal N, Stougaard J, Becana M, Uchiumi T.

J Exp Bot. 2016 Sep;67(17):5275-83. doi: 10.1093/jxb/erw290. Epub 2016 Jul 21.

31.

Intraradical colonization by arbuscular mycorrhizal fungi triggers induction of a lipochitooligosaccharide receptor.

Rasmussen SR, Füchtbauer W, Novero M, Volpe V, Malkov N, Genre A, Bonfante P, Stougaard J, Radutoiu S.

Sci Rep. 2016 Jul 20;6:29733. doi: 10.1038/srep29733.

32.

High-resolution genetic maps of Lotus japonicus and L. burttii based on re-sequencing of recombinant inbred lines.

Shah N, Hirakawa H, Kusakabe S, Sandal N, Stougaard J, Schierup MH, Sato S, Andersen SU.

DNA Res. 2016 Jul 3. pii: dsw033. [Epub ahead of print]

33.

Different Pathways Act Downstream of the CEP Peptide Receptor CRA2 to Regulate Lateral Root and Nodule Development.

Mohd-Radzman NA, Laffont C, Ivanovici A, Patel N, Reid D, Stougaard J, Frugier F, Imin N, Djordjevic MA.

Plant Physiol. 2016 Aug;171(4):2536-48. doi: 10.1104/pp.16.00113. Epub 2016 Jun 24.

34.

The LORE1 insertion mutant resource.

Małolepszy A, Mun T, Sandal N, Gupta V, Dubin M, Urbański D, Shah N, Bachmann A, Fukai E, Hirakawa H, Tabata S, Nadzieja M, Markmann K, Su J, Umehara Y, Soyano T, Miyahara A, Sato S, Hayashi M, Stougaard J, Andersen SU.

Plant J. 2016 Oct;88(2):306-317. doi: 10.1111/tpj.13243. Epub 2016 Sep 27.

35.

Inoculation insensitive promoters for cell type enriched gene expression in legume roots and nodules.

Gavrilovic S, Yan Z, Jurkiewicz AM, Stougaard J, Markmann K.

Plant Methods. 2016 Jan 22;12:4. doi: 10.1186/s13007-016-0105-y. eCollection 2016.

36.

CYTOKININ OXIDASE/DEHYDROGENASE3 Maintains Cytokinin Homeostasis during Root and Nodule Development in Lotus japonicus.

Reid DE, Heckmann AB, Novák O, Kelly S, Stougaard J.

Plant Physiol. 2016 Feb;170(2):1060-74. doi: 10.1104/pp.15.00650. Epub 2015 Dec 7.

37.

Standards for plant synthetic biology: a common syntax for exchange of DNA parts.

Patron NJ, Orzaez D, Marillonnet S, Warzecha H, Matthewman C, Youles M, Raitskin O, Leveau A, Farré G, Rogers C, Smith A, Hibberd J, Webb AA, Locke J, Schornack S, Ajioka J, Baulcombe DC, Zipfel C, Kamoun S, Jones JD, Kuhn H, Robatzek S, Van Esse HP, Sanders D, Oldroyd G, Martin C, Field R, O'Connor S, Fox S, Wulff B, Miller B, Breakspear A, Radhakrishnan G, Delaux PM, Loqué D, Granell A, Tissier A, Shih P, Brutnell TP, Quick WP, Rischer H, Fraser PD, Aharoni A, Raines C, South PF, Ané JM, Hamberger BR, Langdale J, Stougaard J, Bouwmeester H, Udvardi M, Murray JA, Ntoukakis V, Schäfer P, Denby K, Edwards KJ, Osbourn A, Haseloff J.

New Phytol. 2015 Oct;208(1):13-9. doi: 10.1111/nph.13532. Epub 2015 Jul 14. Erratum in: New Phytol. 2016 Jan;209(2):885.

38.

Receptor-mediated exopolysaccharide perception controls bacterial infection.

Kawaharada Y, Kelly S, Nielsen MW, Hjuler CT, Gysel K, Muszyński A, Carlson RW, Thygesen MB, Sandal N, Asmussen MH, Vinther M, Andersen SU, Krusell L, Thirup S, Jensen KJ, Ronson CW, Blaise M, Radutoiu S, Stougaard J.

Nature. 2015 Jul 16;523(7560):308-12. doi: 10.1038/nature14611. Epub 2015 Jul 8.

PMID:
26153863
39.

The deubiquitinating enzyme AMSH1 is required for rhizobial infection and nodule organogenesis in Lotus japonicus.

Małolepszy A, Urbański DF, James EK, Sandal N, Isono E, Stougaard J, Andersen SU.

Plant J. 2015 Aug;83(4):719-31. doi: 10.1111/tpj.12922. Epub 2015 Jul 18.

40.

micro RNA 172 (miR172) signals epidermal infection and is expressed in cells primed for bacterial invasion in Lotus japonicus roots and nodules.

Holt DB, Gupta V, Meyer D, Abel NB, Andersen SU, Stougaard J, Markmann K.

New Phytol. 2015 Oct;208(1):241-56. doi: 10.1111/nph.13445. Epub 2015 May 13.

41.

Naturally occurring diversity helps to reveal genes of adaptive importance in legumes.

Gentzbittel L, Andersen SU, Ben C, Rickauer M, Stougaard J, Young ND.

Front Plant Sci. 2015 Apr 21;6:269. doi: 10.3389/fpls.2015.00269. eCollection 2015.

42.

An intermolecular binding mechanism involving multiple LysM domains mediates carbohydrate recognition by an endopeptidase.

Wong JE, Midtgaard SR, Gysel K, Thygesen MB, Sørensen KK, Jensen KJ, Stougaard J, Thirup S, Blaise M.

Acta Crystallogr D Biol Crystallogr. 2015 Mar;71(Pt 3):592-605. doi: 10.1107/S139900471402793X. Epub 2015 Feb 26.

43.

Keeping track of the growing number of biological functions of chitin and its interaction partners in biomedical research.

Koch BE, Stougaard J, Spaink HP.

Glycobiology. 2015 May;25(5):469-82. doi: 10.1093/glycob/cwv005. Epub 2015 Jan 16. Review.

44.

Chemically synthesized 58-mer LysM domain binds lipochitin oligosaccharide.

Sørensen KK, Simonsen JB, Maolanon NN, Stougaard J, Jensen KJ.

Chembiochem. 2014 Sep 22;15(14):2097-105. doi: 10.1002/cbic.201402125. Epub 2014 Aug 26.

PMID:
25154732
45.

Genetic diversity and population structure analysis of European hexaploid bread wheat (Triticum aestivum L.) varieties.

Nielsen NH, Backes G, Stougaard J, Andersen SU, Jahoor A.

PLoS One. 2014 Apr 9;9(4):e94000. doi: 10.1371/journal.pone.0094000. eCollection 2014.

46.

Lotus japonicus SUNERGOS1 encodes a predicted subunit A of a DNA topoisomerase VI that is required for nodule differentiation and accommodation of rhizobial infection.

Yoon HJ, Hossain MS, Held M, Hou H, Kehl M, Tromas A, Sato S, Tabata S, Andersen SU, Stougaard J, Ross L, Szczyglowski K.

Plant J. 2014 Jun;78(5):811-21. doi: 10.1111/tpj.12520. Epub 2014 May 6.

47.

Lipochitin oligosaccharides immobilized through oximes in glycan microarrays bind LysM proteins.

Maolanon NN, Blaise M, Sørensen KK, Thygesen MB, Cló E, Sullivan JT, Ronson CW, Stougaard J, Blixt O, Jensen KJ.

Chembiochem. 2014 Feb 10;15(3):425-34. doi: 10.1002/cbic.201300520. Epub 2014 Jan 16.

PMID:
24436194
48.

Spatial and temporal expression patterns of chitinase genes in developing zebrafish embryos.

Koch BE, Stougaard J, Spaink HP.

Gene Expr Patterns. 2014 Mar;14(2):69-77. doi: 10.1016/j.gep.2014.01.001. Epub 2014 Jan 11.

PMID:
24418193
49.

Cooperative binding of LysM domains determines the carbohydrate affinity of a bacterial endopeptidase protein.

Wong JE, Alsarraf HM, Kaspersen JD, Pedersen JS, Stougaard J, Thirup S, Blaise M.

FEBS J. 2014 Feb;281(4):1196-208. doi: 10.1111/febs.12698. Epub 2014 Jan 13.

50.

Proteome reference maps of the Lotus japonicus nodule and root.

Dam S, Dyrlund TF, Ussatjuk A, Jochimsen B, Nielsen K, Goffard N, Ventosa M, Lorentzen A, Gupta V, Andersen SU, Enghild JJ, Ronson CW, Roepstorff P, Stougaard J.

Proteomics. 2014 Feb;14(2-3):230-40. doi: 10.1002/pmic.201300353. Epub 2014 Jan 6.

PMID:
24293220

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