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sPyNNaker: A Software Package for Running PyNN Simulations on SpiNNaker.

Rhodes O, Bogdan PA, Brenninkmeijer C, Davidson S, Fellows D, Gait A, Lester DR, Mikaitis M, Plana LA, Rowley AGD, Stokes AB, Furber SB.

Front Neurosci. 2018 Nov 20;12:816. doi: 10.3389/fnins.2018.00816. eCollection 2018.


Patterns of weight change associated with disease diagnosis in a national sample.

Vierboom YC, Preston SH, Stokes A.

PLoS One. 2018 Nov 26;13(11):e0207795. doi: 10.1371/journal.pone.0207795. eCollection 2018.


Code Generation in Computational Neuroscience: A Review of Tools and Techniques.

Blundell I, Brette R, Cleland TA, Close TG, Coca D, Davison AP, Diaz-Pier S, Fernandez Musoles C, Gleeson P, Goodman DFM, Hines M, Hopkins MW, Kumbhar P, Lester DR, Marin B, Morrison A, Müller E, Nowotny T, Peyser A, Plotnikov D, Richmond P, Rowley A, Rumpe B, Stimberg M, Stokes AB, Tomkins A, Trensch G, Woodman M, Eppler JM.

Front Neuroinform. 2018 Nov 5;12:68. doi: 10.3389/fninf.2018.00068. eCollection 2018. Review.


"TRPV1 is a component of the atrial natriuretic signaling complex, and using orally delivered antagonists, presents a valid therapeutic target in the longitudinal reversal and treatment of cardiac hypertrophy and heart failure".

Horton JS, Shiraishi T, Alfulaij N, Small-Howard AL, Turner HC, Kurokawa T, Mori Y, Stokes AJ.

Channels (Austin). 2019 Dec;13(1):1-16. doi: 10.1080/19336950.2018.1547611.


Soft Radio-Frequency Identification Sensors: Wireless Long-Range Strain Sensors Using Radio-Frequency Identification.

Teng L, Pan K, Nemitz MP, Song R, Hu Z, Stokes AA.

Soft Robot. 2018 Nov 8. doi: 10.1089/soro.2018.0026. [Epub ahead of print]


Soil and water bioengineering: Practice and research needs for reconciling natural hazard control and ecological restoration.

Rey F, Bifulco C, Bischetti GB, Bourrier F, De Cesare G, Florineth F, Graf F, Marden M, Mickovski SB, Phillips C, Peklo K, Poesen J, Polster D, Preti F, Rauch HP, Raymond P, Sangalli P, Tardio G, Stokes A.

Sci Total Environ. 2019 Jan 15;648:1210-1218. doi: 10.1016/j.scitotenv.2018.08.217. Epub 2018 Aug 18. Review.


The Limpet: A ROS-Enabled Multi-Sensing Platform for the ORCA Hub.

Sayed ME, Nemitz MP, Aracri S, McConnell AC, McKenzie RM, Stokes AA.

Sensors (Basel). 2018 Oct 16;18(10). pii: E3487. doi: 10.3390/s18103487.


Optimization of Acquisition and Analysis Methods for Clinical Dynamic Susceptibility Contrast MRI Using a Population-Based Digital Reference Object.

Semmineh NB, Bell LC, Stokes AM, Hu LS, Boxerman JL, Quarles CC.

AJNR Am J Neuroradiol. 2018 Nov;39(11):1981-1988. doi: 10.3174/ajnr.A5827. Epub 2018 Oct 11.


Prevalence, incidence, predictors, treatment, and control of hypertension among HIV-positive adults on antiretroviral treatment in public sector treatment programs in South Africa.

Brennan AT, Jamieson L, Crowther NJ, Fox MP, George JA, Berry KM, Stokes A, Maskew M, Sanne I, Long L, Cassim N, Rosen S.

PLoS One. 2018 Oct 3;13(10):e0204020. doi: 10.1371/journal.pone.0204020. eCollection 2018.


An Investigation into Tetrodotoxin (TTX) Levels Associated with the Red Dorsal Spots in Eastern Newt (Notophthalmus viridescens) Efts and Adults.

Spicer MM, Stokes AN, Chapman TL, Brodie ED Jr, Brodie ED 3rd, Gall BG.

J Toxicol. 2018 Sep 2;2018:9196865. doi: 10.1155/2018/9196865. eCollection 2018.


Electronic Cigarette Use Prevalence, Associated Factors, and Pattern by Cigarette Smoking Status in the United States From NHANES (National Health and Nutrition Examination Survey) 2013-2014.

Jaber RM, Mirbolouk M, DeFilippis AP, Maziak W, Keith R, Payne T, Stokes A, Benjamin E, Bhatnagar A, Blankstein R, Saxena A, Blaha MJ, Nasir K.

J Am Heart Assoc. 2018 Jul 14;7(14). pii: e008178. doi: 10.1161/JAHA.117.008178.


Cannabinoids, the Heart of the Matter.

Alfulaij N, Meiners F, Michalek J, Small-Howard AL, Turner HC, Stokes AJ.

J Am Heart Assoc. 2018 Jul 13;7(14). pii: e009099. doi: 10.1161/JAHA.118.009099. Review. No abstract available.


Behavioral Learning in a Cognitive Neuromorphic Robot: An Integrative Approach.

Rast AD, Adams SV, Davidson S, Davies S, Hopkins M, Rowley A, Stokes AB, Wennekers T, Furber S, Cangelosi A.

IEEE Trans Neural Netw Learn Syst. 2018 Dec;29(12):6132-6144. doi: 10.1109/TNNLS.2018.2816518. Epub 2018 May 2.


Representation of obese participants in obesity-related cancer randomized trials.

Pestine E, Stokes A, Trinquart L.

Ann Oncol. 2018 Jul 1;29(7):1582-1587. doi: 10.1093/annonc/mdy138.


Performance Comparison of the Digital Neuromorphic Hardware SpiNNaker and the Neural Network Simulation Software NEST for a Full-Scale Cortical Microcircuit Model.

van Albada SJ, Rowley AG, Senk J, Hopkins M, Schmidt M, Stokes AB, Lester DR, Diesmann M, Furber SB.

Front Neurosci. 2018 May 23;12:291. doi: 10.3389/fnins.2018.00291. eCollection 2018.


Stratified Probabilistic Bias Analysis for Body Mass Index-related Exposure Misclassification in Postmenopausal Women.

Banack HR, Stokes A, Fox MP, Hovey KM, Cespedes Feliciano EM, LeBlanc ES, Bird C, Caan BJ, Kroenke CH, Allison MA, Going SB, Snetselaar L, Cheng TD, Chlebowski RT, Stefanick ML, LaMonte MJ, Wactawski-Wende J.

Epidemiology. 2018 Sep;29(5):604-613. doi: 10.1097/EDE.0000000000000863.


Mechanical traits of fine roots as a function of topology and anatomy.

Mao Z, Wang Y, McCormack ML, Rowe N, Deng X, Yang X, Xia S, Nespoulous J, Sidle RC, Guo D, Stokes A.

Ann Bot. 2018 May 26. doi: 10.1093/aob/mcy076. [Epub ahead of print]


Imaging vascular and hemodynamic features of the brain using dynamic susceptibility contrast and dynamic contrast enhanced MRI.

Quarles CC, Bell LC, Stokes AM.

Neuroimage. 2018 May 3. pii: S1053-8119(18)30389-6. doi: 10.1016/j.neuroimage.2018.04.069. [Epub ahead of print]


Electronic Cigarette Prevalence and Patterns of Use in Adults with a History of Cardiovascular Disease in the United States.

Stokes A, Collins JM, Berry KM, Reynolds LM, Fetterman JL, Rodriguez CJ, Siegel MB, Benjamin EJ.

J Am Heart Assoc. 2018 Apr 26;7(9). pii: e007602. doi: 10.1161/JAHA.117.007602.


Prevalence and Determinants of Engagement with Obesity Care in the United States.

Stokes A, Collins JM, Grant BF, Hsiao CW, Johnston SS, Ammann EM, Berry KM, Tong C, Scamuffa RF.

Obesity (Silver Spring). 2018 May;26(5):814-818. doi: 10.1002/oby.22173. Epub 2018 Apr 6.


An artificial interphase enables reversible magnesium chemistry in carbonate electrolytes.

Son SB, Gao T, Harvey SP, Steirer KX, Stokes A, Norman A, Wang C, Cresce A, Xu K, Ban C.

Nat Chem. 2018 May;10(5):532-539. doi: 10.1038/s41557-018-0019-6. Epub 2018 Apr 2.


Dover sole.

Alonso JV, Tucker S, Lakshmanan G, Stokes A.

Am J Emerg Med. 2018 Jul;36(7):1321.e5-1321.e6. doi: 10.1016/j.ajem.2018.03.056. Epub 2018 Mar 21.


E-cigarette initiation and associated changes in smoking cessation and reduction: the Population Assessment of Tobacco and Health Study, 2013-2015.

Berry KM, Reynolds LM, Collins JM, Siegel MB, Fetterman JL, Hamburg NM, Bhatnagar A, Benjamin EJ, Stokes A.

Tob Control. 2018 Mar 24. pii: tobaccocontrol-2017-054108. doi: 10.1136/tobaccocontrol-2017-054108. [Epub ahead of print]


Obesity Progression Between Young Adulthood and Midlife and Incident Diabetes: A Retrospective Cohort Study of U.S. Adults.

Stokes A, Collins JM, Grant BF, Scamuffa RF, Hsiao CW, Johnston SS, Ammann EM, Manson JE, Preston SH.

Diabetes Care. 2018 May;41(5):1025-1031. doi: 10.2337/dc17-2336. Epub 2018 Mar 5.


Tree root dynamics in montane and sub-alpine mixed forest patches.

Wang Y, Kim JH, Mao Z, Ramel M, Pailler F, Perez J, Rey H, Tron S, Jourdan C, Stokes A.

Ann Bot. 2018 Nov 3;122(5):861-872. doi: 10.1093/aob/mcy021.


Of poisons and parasites-the defensive role of tetrodotoxin against infections in newts.

Johnson PTJ, Calhoun DM, Stokes AN, Susbilla CB, McDevitt-Galles T, Briggs CJ, Hoverman JT, Tkach VV, de Roode JC.

J Anim Ecol. 2018 Jul;87(4):1192-1204. doi: 10.1111/1365-2656.12816. Epub 2018 Mar 30.


Transcriptional and Functional Plasticity Induced by Chronic Insulin Exposure in a Mast Cell-Like Basophilic Leukemia Cell Model.

Jansen C, Speck M, Greineisen WE, Maaetoft-Udsen K, Cordasco E, Shimoda LM, Stokes AJ, Turner H.

J Immunobiol. 2017;2(4). pii: 135. doi: 10.4172/2476-1966.1000135. Epub 2017 Dec 11.


Understanding the determinants of hemoglobin and iron status: adolescent-adult women comparisons in SANHANES-1.

Mchiza ZJ, Parker WA, Sewpaul R, Job N, Chola L, Mutyambizi C, Sithole M, Stokes A, Labadarios D.

Ann N Y Acad Sci. 2018 Jan 23. doi: 10.1111/nyas.13528. [Epub ahead of print]


The role of obesity in exceptionally slow US mortality improvement.

Preston SH, Vierboom YC, Stokes A.

Proc Natl Acad Sci U S A. 2018 Jan 30;115(5):957-961. doi: 10.1073/pnas.1716802115. Epub 2018 Jan 16.


Rates and trends for inpatient surgeries in pediatric Crohn's disease in the United States from 2003 to 2012.

Stokes AL, Kulaylat AN, Rocourt DV, Hollenbeak CS, Koltun W, Falaiye T.

J Pediatr Surg. 2018 Jul;53(7):1334-1338. doi: 10.1016/j.jpedsurg.2017.11.060. Epub 2017 Dec 5.



Nemiroski A, Shevchenko YY, Stokes AA, Unal B, Ainla A, Albert S, Compton G, MacDonald E, Schwab Y, Zellhofer C, Whitesides GM.

Soft Robot. 2017 Sep;4(3):183-190. doi: 10.1089/soro.2016.0043. Epub 2017 May 24.


Is BMI a valid measure of obesity in postmenopausal women?

Banack HR, Wactawski-Wende J, Hovey KM, Stokes A.

Menopause. 2018 Mar;25(3):307-313. doi: 10.1097/GME.0000000000000989.


Quantifying unmet need for hypertension care in South Africa through a care cascade: evidence from the SANHANES, 2011-2012.

Berry KM, Parker WA, Mchiza ZJ, Sewpaul R, Labadarios D, Rosen S, Stokes A.

BMJ Glob Health. 2017 Aug 16;2(3):e000348. doi: 10.1136/bmjgh-2017-000348. eCollection 2017.


Impact of Wide-Ranging Nanoscale Chemistry on Band Structure at Cu(In, Ga)Se2 Grain Boundaries.

Stokes A, Al-Jassim M, Diercks D, Clarke A, Gorman B.

Sci Rep. 2017 Oct 26;7(1):14163. doi: 10.1038/s41598-017-14215-0.


Interferometric synthetic aperture ladar using code division multiple access apertures.

Stokes AJ, Dierking MP, Rabb DJ.

Appl Opt. 2017 Jun 10;56(17):5003-5012. doi: 10.1364/AO.56.005003.


Prevalence and unmet need for diabetes care across the care continuum in a national sample of South African adults: Evidence from the SANHANES-1, 2011-2012.

Stokes A, Berry KM, Mchiza Z, Parker WA, Labadarios D, Chola L, Hongoro C, Zuma K, Brennan AT, Rockers PC, Rosen S.

PLoS One. 2017 Oct 2;12(10):e0184264. doi: 10.1371/journal.pone.0184264. eCollection 2017.


Systematic Investigation of the Alucone-Coating Enhancement on Silicon Anodes.

Son SB, Wang Y, Xu J, Li X, Groner M, Stokes A, Yang Y, Cheng YT, Ban C.

ACS Appl Mater Interfaces. 2017 Nov 22;9(46):40143-40150. doi: 10.1021/acsami.7b08960. Epub 2017 Nov 7.


Music exposure and maturation of late preterm sleep-wake cycles: a randomised crossover trial.

Stokes A, Agthe AG, El Metwally D.

Acta Paediatr. 2018 Apr;107(4):582-586. doi: 10.1111/apa.14079. Epub 2017 Oct 11.


Prevalence and Trends in Lifetime Obesity in the U.S., 1988-2014.

Stokes A, Ni Y, Preston SH.

Am J Prev Med. 2017 Nov;53(5):567-575. doi: 10.1016/j.amepre.2017.06.008. Epub 2017 Sep 5.


A Spiking Neural Network Model of the Lateral Geniculate Nucleus on the SpiNNaker Machine.

Sen-Bhattacharya B, Serrano-Gotarredona T, Balassa L, Bhattacharya A, Stokes AB, Rowley A, Sugiarto I, Furber S.

Front Neurosci. 2017 Aug 9;11:454. doi: 10.3389/fnins.2017.00454. eCollection 2017.


Is there more than one way to skin a newt? Convergent toxin resistance in snakes is not due to a common genetic mechanism.

Feldman CR, Durso AM, Hanifin CT, Pfrender ME, Ducey PK, Stokes AN, Barnett KE, Brodie ED 3rd, Brodie ED Jr.

Heredity (Edinb). 2017 Dec;119(6):468. doi: 10.1038/hdy.2017.39. Epub 2017 Aug 9.


How Dangerous Is Obesity? Issues in Measurement and Interpretation.

Stokes A, Preston SH.

Popul Dev Rev. 2016 Dec;42(4):595-614. doi: 10.1111/padr.12015. Epub 2016 Dec 12. No abstract available.


Optimization of DSC MRI Echo Times for CBV Measurements Using Error Analysis in a Pilot Study of High-Grade Gliomas.

Bell LC, Does MD, Stokes AM, Baxter LC, Schmainda KM, Dueck AC, Quarles CC.

AJNR Am J Neuroradiol. 2017 Sep;38(9):1710-1715. doi: 10.3174/ajnr.A5295. Epub 2017 Jul 6.


Robotic devices and brain-machine interfaces for hand rehabilitation post-stroke.

McConnell AC, Moioli RC, Brasil FL, Vallejo M, Corne DW, Vargas PA, Stokes AA.

J Rehabil Med. 2017 Jun 28;49(6):449-460. doi: 10.2340/16501977-2229. Review.


A Population-Based Digital Reference Object (DRO) for Optimizing Dynamic Susceptibility Contrast (DSC)-MRI Methods for Clinical Trials.

Semmineh NB, Stokes AM, Bell LC, Boxerman JL, Quarles CC.

Tomography. 2017 Mar;3(1):41-49. doi: 10.18383/j.tom.2016.00286.


The 'obesity paradox' may not be a paradox at all.

Banack HR, Stokes A.

Int J Obes (Lond). 2017 Aug;41(8):1162-1163. doi: 10.1038/ijo.2017.99. Epub 2017 Jun 6. No abstract available.


The contribution of rising adiposity to the increasing prevalence of diabetes in the United States.

Stokes A, Preston SH.

Prev Med. 2017 Aug;101:91-95. doi: 10.1016/j.ypmed.2017.05.031. Epub 2017 Jun 1.


Institution of a Preoperative Stoma Education Group Class Decreases Rate of Peristomal Complications in New Stoma Patients.

Stokes AL, Tice S, Follett S, Paskey D, Abraham L, Bealer C, Keister H, Koltun W, Puleo FJ.

J Wound Ostomy Continence Nurs. 2017 Jul/Aug;44(4):363-367. doi: 10.1097/WON.0000000000000338.


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