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A High-Quality Reference Genome Assembly of the Saltwater Crocodile, Crocodylus porosus, Reveals Patterns of Selection in Crocodylidae.

Ghosh A, Johnson MG, Osmanski AB, Louha S, Bayona-Vásquez NJ, Glenn TC, Gongora J, Green RE, Isberg S, Stevens RD, Ray DA.

Genome Biol Evol. 2020 Jan 1;12(1):3635-3646. doi: 10.1093/gbe/evz269.


Insights into the assembly rules of a continent-wide multilayer network.

Mello MAR, Felix GM, Pinheiro RBP, Muylaert RL, Geiselman C, Santana SE, Tschapka M, Lotfi N, Rodrigues FA, Stevens RD.

Nat Ecol Evol. 2019 Nov;3(11):1525-1532. doi: 10.1038/s41559-019-1002-3. Epub 2019 Oct 14.


Machine Learning to Decode the Electroencephalography for Post Cardiac Arrest Neuroprognostication.

Stevens RD.

Crit Care Med. 2019 Oct;47(10):1474-1476. doi: 10.1097/CCM.0000000000003932. No abstract available.


Cord Blood Metabolomics: Association With Newborn Anthropometrics and C-Peptide Across Ancestries.

Kadakia R, Talbot O, Kuang A, Bain JR, Muehlbauer MJ, Stevens RD, Ilkayeva OR, Lowe LP, Metzger BE, Newgard CB, Scholtens DM, Lowe WL; HAPO Study Cooperative Research Group.

J Clin Endocrinol Metab. 2019 Oct 1;104(10):4459-4472. doi: 10.1210/jc.2019-00238.


Impact of Structured Pathways for Postcardiac Arrest Care: A Systematic Review and Meta-Analysis.

Storm C, Leithner C, Krannich A, Suarez JI, Stevens RD.

Crit Care Med. 2019 Aug;47(8):e710-e716. doi: 10.1097/CCM.0000000000003827.


Simultaneous TE Analysis of 19 Heliconiine Butterflies Yields Novel Insights into Rapid TE-Based Genome Diversification and Multiple SINE Births and Deaths.

Ray DA, Grimshaw JR, Halsey MK, Korstian JM, Osmanski AB, Sullivan KAM, Wolf KA, Reddy H, Foley N, Stevens RD, Knisbacher BA, Levy O, Counterman B, Edelman NB, Mallet J.

Genome Biol Evol. 2019 Aug 1;11(8):2162-2177. doi: 10.1093/gbe/evz125.


Disrupted Maturation of the Microbiota and Metabolome among Extremely Preterm Infants with Postnatal Growth Failure.

Younge NE, Newgard CB, Cotten CM, Goldberg RN, Muehlbauer MJ, Bain JR, Stevens RD, O'Connell TM, Rawls JF, Seed PC, Ashley PL.

Sci Rep. 2019 Jun 3;9(1):8167. doi: 10.1038/s41598-019-44547-y.


Pathophysiological Insights into Spreading Depolarization in Severe Traumatic Brain Injury.

Stevens RD, Koehler RC.

Neurocrit Care. 2019 Jun;30(3):569-571. doi: 10.1007/s12028-019-00705-8. No abstract available.


Respiratory Phenomics across Multiple Models of Protein Hyperacylation in Cardiac Mitochondria Reveals a Marginal Impact on Bioenergetics.

Fisher-Wellman KH, Draper JA, Davidson MT, Williams AS, Narowski TM, Slentz DH, Ilkayeva OR, Stevens RD, Wagner GR, Najjar R, Hirschey MD, Thompson JW, Olson DP, Kelly DP, Koves TR, Grimsrud PA, Muoio DM.

Cell Rep. 2019 Feb 5;26(6):1557-1572.e8. doi: 10.1016/j.celrep.2019.01.057.


Maternal metabolites during pregnancy are associated with newborn outcomes and hyperinsulinaemia across ancestries.

Kadakia R, Nodzenski M, Talbot O, Kuang A, Bain JR, Muehlbauer MJ, Stevens RD, Ilkayeva OR, O'Neal SK, Lowe LP, Metzger BE, Newgard CB, Scholtens DM, Lowe WL Jr; HAPO Study Cooperative Research Group.

Diabetologia. 2019 Mar;62(3):473-484. doi: 10.1007/s00125-018-4781-1. Epub 2018 Nov 27.


Subtypes of Delirium: A Step Toward Precision Medicine.

Stevens RD, Zink EK.

Crit Care Med. 2018 Dec;46(12):2058-2059. doi: 10.1097/CCM.0000000000003462. No abstract available.


Negative relationships between species richness and temporal variability are common but weak in natural systems.

Houlahan JE, Currie DJ, Cottenie K, Cumming GS, Findlay CS, Fuhlendorf SD, Legendre P, Muldavin EH, Noble D, Russell R, Stevens RD, Willis TJ, Wondzell SM.

Ecology. 2018 Nov;99(11):2592-2604. doi: 10.1002/ecy.2514. Epub 2018 Oct 12.


Adverse Effects of Fenofibrate in Mice Deficient in the Protein Quality Control Regulator, CHIP.

Ravi S, Parry TL, Willis MS, Lockyer P, Patterson C, Bain JR, Stevens RD, Ilkayeva OR, Newgard CB, Schisler JC.

J Cardiovasc Dev Dis. 2018 Aug 15;5(3). pii: E43. doi: 10.3390/jcdd5030043.


Hemoglobin concentration does not impact 3-month outcome following acute ischemic stroke.

Sharma K, Johnson DJ, Johnson B, Frank SM, Stevens RD.

BMC Neurol. 2018 Jun 2;18(1):78. doi: 10.1186/s12883-018-1082-8.


Magnetic Resonance Imaging in Aneurysmal Subarachnoid Hemorrhage: Current Evidence and Future Directions.

Nelson SE, Sair HI, Stevens RD.

Neurocrit Care. 2018 Oct;29(2):241-252. doi: 10.1007/s12028-018-0534-8.


Safety and Feasibility of a Neuroscience Critical Care Program to Mobilize Patients With Primary Intracerebral Hemorrhage.

Bahouth MN, Power MC, Zink EK, Kozeniewski K, Kumble S, Deluzio S, Urrutia VC, Stevens RD.

Arch Phys Med Rehabil. 2018 Jun;99(6):1220-1225. doi: 10.1016/j.apmr.2018.01.034. Epub 2018 Mar 23.


Physiological mechanisms of sustained fumagillin-induced weight loss.

An J, Wang L, Patnode ML, Ridaura VK, Haldeman JM, Stevens RD, Ilkayeva O, Bain JR, Muehlbauer MJ, Glynn EL, Thomas S, Muoio D, Summers SA, Vath JE, Hughes TE, Gordon JI, Newgard CB.

JCI Insight. 2018 Mar 8;3(5). pii: 99453. doi: 10.1172/jci.insight.99453.


Erratum. Maternal BMI and Glycemia Impact the Fetal Metabolome. Diabetes Care 2017;40:902-910.

Lowe WL Jr, Bain JR, Nodzenski M, Reisetter AC, Muehlbauer MJ, Stevens RD, Ilkayeva OR, Lowe LP, Metzger BE, Newgard CB, Scholtens DM; HAPO Study Cooperative Research Group.

Diabetes Care. 2018 Mar;41(3):640. doi: 10.2337/dc18-er03b. Epub 2018 Jan 8. No abstract available.


Anti-aging factor, serum alpha-Klotho, as a marker of acute physiological stress, and a predictor of ICU mortality, in patients with septic shock.

Abdelmalik PA, Stevens RD, Singh S, Skinner J, Carhuapoma JR, Noel S, Johns R, Fuchs RJ.

J Crit Care. 2018 Apr;44:323-330. doi: 10.1016/j.jcrc.2017.11.023. Epub 2017 Nov 16.


Feasibility of Early, Motor-Assisted Cycle Ergometry in Critically Ill Neurological Patients With Upper Limb Weakness and Variable Cognitive Status: A Case Series.

Deluzio S, Vora I, Kumble S, Zink EK, Stevens RD, Bahouth MN.

Am J Phys Med Rehabil. 2018 May;97(5):e37-e41. doi: 10.1097/PHM.0000000000000857.


Early Functional Connectome Integrity and 1-Year Recovery in Comatose Survivors of Cardiac Arrest.

Sair HI, Hannawi Y, Li S, Kornbluth J, Demertzi A, Di Perri C, Chabanne R, Jean B, Benali H, Perlbarg V, Pekar J, Luyt CE, Galanaud D, Velly L, Puybasset L, Laureys S, Caffo B, Stevens RD; Neuroimaging for Coma Emergence and Recovery (NICER) Consortium.

Radiology. 2018 Apr;287(1):247-255. doi: 10.1148/radiol.2017162161. Epub 2017 Oct 18.


Sphingolipids and microRNA Changes in Blood following Blast Traumatic Brain Injury: An Exploratory Study.

Sajja VSSS, Jablonska A, Haughey N, Bulte JWM, Stevens RD, Long JB, Walczak P, Janowski M.

J Neurotrauma. 2018 Jan 15;35(2):353-361. doi: 10.1089/neu.2017.5009. Epub 2017 Nov 17.


Conflicting Evolutionary Histories of the Mitochondrial and Nuclear Genomes in New World Myotis Bats.

Platt RN 2nd, Faircloth BC, Sullivan KAM, Kieran TJ, Glenn TC, Vandewege MW, Lee TE Jr, Baker RJ, Stevens RD, Ray DA.

Syst Biol. 2018 Mar 1;67(2):236-249. doi: 10.1093/sysbio/syx070.


ATLANTIC BATS: a data set of bat communities from the Atlantic Forests of South America.

Muylaert RDL, Stevens RD, Esbérard CEL, Mello MAR, Garbino GST, Varzinczak LH, Faria D, Weber MDM, Kerches Rogeri P, Regolin AL, Oliveira HFMD, Costa LDM, Barros MAS, Sabino-Santos G Jr, Crepaldi de Morais MA, Kavagutti VS, Passos FC, Marjakangas EL, Maia FGM, Ribeiro MC, Galetti M.

Ecology. 2017 Dec;98(12):3227. doi: 10.1002/ecy.2007.


Targeted Metabolomics Demonstrates Distinct and Overlapping Maternal Metabolites Associated With BMI, Glucose, and Insulin Sensitivity During Pregnancy Across Four Ancestry Groups.

Jacob S, Nodzenski M, Reisetter AC, Bain JR, Muehlbauer MJ, Stevens RD, Ilkayeva OR, Lowe LP, Metzger BE, Newgard CB, Scholtens DM, Lowe WL Jr; HAPO Study Cooperative Research Group.

Diabetes Care. 2017 Jul;40(7):911-919. doi: 10.2337/dc16-2453.


Maternal BMI and Glycemia Impact the Fetal Metabolome.

Lowe WL Jr, Bain JR, Nodzenski M, Reisetter AC, Muehlbauer MJ, Stevens RD, Ilkayeva OR, Lowe LP, Metzger BE, Newgard CB, Scholtens DM; HAPO Study Cooperative Research Group.

Diabetes Care. 2017 Jul;40(7):902-910. doi: 10.2337/dc16-2452. Erratum in: Diabetes Care. 2018 Jan 8;:.


Inflammatory Signatures in ICU-Acquired Weakness.

Stevens RD, Zink EK.

Crit Care Med. 2017 Jun;45(6):1098-1100. doi: 10.1097/CCM.0000000000002447. No abstract available.


SIRT4 Is a Lysine Deacylase that Controls Leucine Metabolism and Insulin Secretion.

Anderson KA, Huynh FK, Fisher-Wellman K, Stuart JD, Peterson BS, Douros JD, Wagner GR, Thompson JW, Madsen AS, Green MF, Sivley RM, Ilkayeva OR, Stevens RD, Backos DS, Capra JA, Olsen CA, Campbell JE, Muoio DM, Grimsrud PA, Hirschey MD.

Cell Metab. 2017 Apr 4;25(4):838-855.e15. doi: 10.1016/j.cmet.2017.03.003.


A Class of Reactive Acyl-CoA Species Reveals the Non-enzymatic Origins of Protein Acylation.

Wagner GR, Bhatt DP, O'Connell TM, Thompson JW, Dubois LG, Backos DS, Yang H, Mitchell GA, Ilkayeva OR, Stevens RD, Grimsrud PA, Hirschey MD.

Cell Metab. 2017 Apr 4;25(4):823-837.e8. doi: 10.1016/j.cmet.2017.03.006.


Physiological Effects of Early Incremental Mobilization of a Patient with Acute Intracerebral and Intraventricular Hemorrhage Requiring Dual External Ventricular Drainage.

Kumble S, Zink EK, Burch M, Deluzio S, Stevens RD, Bahouth MN.

Neurocrit Care. 2017 Aug;27(1):115-119. doi: 10.1007/s12028-017-0376-9.


Determinants of prognosis in neurocatastrophes.

Sharma K, Stevens RD.

Handb Clin Neurol. 2017;140:379-395. doi: 10.1016/B978-0-444-63600-3.00021-0. Review.


Mixture model normalization for non-targeted gas chromatography/mass spectrometry metabolomics data.

Reisetter AC, Muehlbauer MJ, Bain JR, Nodzenski M, Stevens RD, Ilkayeva O, Metzger BE, Newgard CB, Lowe WL Jr, Scholtens DM.

BMC Bioinformatics. 2017 Feb 2;18(1):84. doi: 10.1186/s12859-017-1501-7.


Head injury serum markers for assessing response to trauma: Design of the HeadSMART study.

Peters ME, Rao V, Bechtold KT, Roy D, Sair HI, Leoutsakos JM, Diaz-Arrastia R, Stevens RD, Batty DS Jr, Falk H, Fernandez C, Ofoche U, Vassila A, Hall AJ, Anderson B, Bessman E, Lyketsos CG, Everett AD, Van Eyk J, Korley FK.

Brain Inj. 2017;31(3):370-378. doi: 10.1080/02699052.2016.1231344. Epub 2017 Jan 31.


Associations of maternal BMI and insulin resistance with the maternal metabolome and newborn outcomes.

Sandler V, Reisetter AC, Bain JR, Muehlbauer MJ, Nodzenski M, Stevens RD, Ilkayeva O, Lowe LP, Metzger BE, Newgard CB, Scholtens DM, Lowe WL Jr; HAPO Study Cooperative Research Group.

Diabetologia. 2017 Mar;60(3):518-530. doi: 10.1007/s00125-016-4182-2. Epub 2016 Dec 16.


Coma Prognostication: Looks That Count.

Stevens RD, Hannawi Y.

Crit Care Med. 2016 Dec;44(12):2292-2293. No abstract available.


Threshold effect of habitat loss on bat richness in cerrado-forest landscapes.

Muylaert RL, Stevens RD, Ribeiro MC.

Ecol Appl. 2016 Sep;26(6):1854-1867. doi: 10.1890/15-1757.1.


Human-modified habitats change patterns of population genetic structure and group relatedness in Peter's tent-roosting bats.

Sagot M, Phillips CD, Baker RJ, Stevens RD.

Ecol Evol. 2016 Jul 29;6(17):6050-63. doi: 10.1002/ece3.2255. eCollection 2016 Sep.


Ammonia Level and Mortality in Acute Liver Failure: A Single-Center Experience.

Niranjan-Azadi AM, Araz F, Patel YA, Alachkar N, Alqahtani S, Cameron AM, Stevens RD, Gurakar A.

Ann Transplant. 2016 Aug 2;21:479-83.


Metabolomic Profiling Identifies Novel Circulating Biomarkers of Mitochondrial Dysfunction Differentially Elevated in Heart Failure With Preserved Versus Reduced Ejection Fraction: Evidence for Shared Metabolic Impairments in Clinical Heart Failure.

Hunter WG, Kelly JP, McGarrah RW 3rd, Khouri MG, Craig D, Haynes C, Ilkayeva O, Stevens RD, Bain JR, Muehlbauer MJ, Newgard CB, Felker GM, Hernandez AF, Velazquez EJ, Kraus WE, Shah SH.

J Am Heart Assoc. 2016 Jul 29;5(8). pii: e003190. doi: 10.1161/JAHA.115.003190.


Predictive Modeling in Aneurysmal Subarachnoid Hemorrhage.

Stevens RD, Sharma K.

Crit Care Med. 2016 Aug;44(8):1613-4. doi: 10.1097/CCM.0000000000001808. No abstract available.


Branched-chain amino acid restriction in Zucker-fatty rats improves muscle insulin sensitivity by enhancing efficiency of fatty acid oxidation and acyl-glycine export.

White PJ, Lapworth AL, An J, Wang L, McGarrah RW, Stevens RD, Ilkayeva O, George T, Muehlbauer MJ, Bain JR, Trimmer JK, Brosnan MJ, Rolph TP, Newgard CB.

Mol Metab. 2016 Apr 22;5(7):538-551. doi: 10.1016/j.molmet.2016.04.006. eCollection 2016 Jul.


Taxonomic and Phylogenetic Determinants of Functional Composition of Bolivian Bat Assemblages.

Aguirre LF, Montaño-Centellas FA, Gavilanez MM, Stevens RD.

PLoS One. 2016 Jul 6;11(7):e0158170. doi: 10.1371/journal.pone.0158170. eCollection 2016.


Metabolic Networks and Metabolites Underlie Associations Between Maternal Glucose During Pregnancy and Newborn Size at Birth.

Scholtens DM, Bain JR, Reisetter AC, Muehlbauer MJ, Nodzenski M, Stevens RD, Ilkayeva O, Lowe LP, Metzger BE, Newgard CB, Lowe WL Jr; HAPO Study Cooperative Research Group.

Diabetes. 2016 Jul;65(7):2039-50. doi: 10.2337/db15-1748. Epub 2016 Apr 5.


Author Response: Yousef Hannawi, Columbus, OH; Robert D. Stevens, Baltimore, MD.

Hannawi Y, Stevens RD.

Neurology. 2016 Jan 12;86(2):200-1. No abstract available.


Phylogenetic community structure of North American desert bats: influence of environment at multiple spatial and taxonomic scales.

Patrick LE, Stevens RD.

J Anim Ecol. 2016 Jul;85(4):1118-30. doi: 10.1111/1365-2656.12529. Epub 2016 May 16.


Mapping the Connectome Following Traumatic Brain Injury.

Hannawi Y, Stevens RD.

Curr Neurol Neurosci Rep. 2016 May;16(5):44. doi: 10.1007/s11910-016-0642-9. Review.


Research Resource: Roles for Calcium/Calmodulin-Dependent Protein Kinase Kinase 2 (CaMKK2) in Systems Metabolism.

Marcelo KL, Ribar T, Means CR, Tsimelzon A, Stevens RD, Ilkayeva O, Bain JR, Hilsenbeck SG, Newgard CB, Means AR, York B.

Mol Endocrinol. 2016 May;30(5):557-72. doi: 10.1210/me.2016-1021. Epub 2016 Mar 22.


Association of Plasma Small-Molecule Intermediate Metabolites With Age and Body Mass Index Across Six Diverse Study Populations.

Kraus WE, Pieper CF, Huffman KM, Thompson DK, Kraus VB, Morey MC, Cohen HJ, Ravussin E, Redman LM, Bain JR, Stevens RD, Newgard CB.

J Gerontol A Biol Sci Med Sci. 2016 Nov;71(11):1507-1513. Epub 2016 Mar 16.


Dynamic Glucose-Enhanced (DGE) MRI: Translation to Human Scanning and First Results in Glioma Patients.

Xu X, Yadav NN, Knutsson L, Hua J, Kalyani R, Hall E, Laterra J, Blakeley J, Strowd R, Pomper M, Barker P, Chan K, Liu G, McMahon MT, Stevens RD, van Zijl PC.

Tomography. 2015 Dec;1(2):105-114.


Resting brain activity in disorders of consciousness: A systematic review and meta-analysis.

Shen D, Cui L, Shen Z, Garbarino S, Sannita WG, Hannawi Y, Stevens RD.

Neurology. 2016 Jan 12;86(2):200-1. doi: 10.1212/WNL.0000000000002274. No abstract available.


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