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Items: 1 to 50 of 97

1.

Changes throughout a Genetic Network Mask the Contribution of Hox Gene Evolution.

Liu Y, Ramos-Womack M, Han C, Reilly P, Brackett KL, Rogers W, Williams TM, Andolfatto P, Stern DL, Rebeiz M.

Curr Biol. 2019 Jul 8;29(13):2157-2166.e6. doi: 10.1016/j.cub.2019.05.074. Epub 2019 Jun 27.

PMID:
31257142
2.

Evolution of Mechanisms that Control Mating in Drosophila Males.

Ahmed OM, Avila-Herrera A, Tun KM, Serpa PH, Peng J, Parthasarathy S, Knapp JM, Stern DL, Davis GW, Pollard KS, Shah NM.

Cell Rep. 2019 May 28;27(9):2527-2536.e4. doi: 10.1016/j.celrep.2019.04.104.

3.

Neural Evolution of Context-Dependent Fly Song.

Ding Y, Lillvis JL, Cande J, Berman GJ, Arthur BJ, Long X, Xu M, Dickson BJ, Stern DL.

Curr Biol. 2019 Apr 1;29(7):1089-1099.e7. doi: 10.1016/j.cub.2019.02.019. Epub 2019 Mar 14.

4.

Gene flow mediates the role of sex chromosome meiotic drive during complex speciation.

Meiklejohn CD, Landeen EL, Gordon KE, Rzatkiewicz T, Kingan SB, Geneva AJ, Vedanayagam JP, Muirhead CA, Garrigan D, Stern DL, Presgraves DC.

Elife. 2018 Dec 13;7. pii: e35468. doi: 10.7554/eLife.35468.

5.

Correlated Evolution of Two Copulatory Organs via a Single cis-Regulatory Nucleotide Change.

Nagy O, Nuez I, Savisaar R, Peluffo AE, Yassin A, Lang M, Stern DL, Matute DR, David JR, Courtier-Orgogozo V.

Curr Biol. 2018 Nov 5;28(21):3450-3457.e13. doi: 10.1016/j.cub.2018.08.047. Epub 2018 Oct 18.

PMID:
30344115
6.

Evolution of a central neural circuit underlies Drosophila mate preferences.

Seeholzer LF, Seppo M, Stern DL, Ruta V.

Nature. 2018 Jul;559(7715):564-569. doi: 10.1038/s41586-018-0322-9. Epub 2018 Jul 11.

7.

Optogenetic dissection of descending behavioral control in Drosophila.

Cande J, Namiki S, Qiu J, Korff W, Card GM, Shaevitz JW, Stern DL, Berman GJ.

Elife. 2018 Jun 26;7. pii: e34275. doi: 10.7554/eLife.34275.

8.

Accurate and sensitive quantification of protein-DNA binding affinity.

Rastogi C, Rube HT, Kribelbauer JF, Crocker J, Loker RE, Martini GD, Laptenko O, Freed-Pastor WA, Prives C, Stern DL, Mann RS, Bussemaker HJ.

Proc Natl Acad Sci U S A. 2018 Apr 17;115(16):E3692-E3701. doi: 10.1073/pnas.1714376115. Epub 2018 Apr 2.

9.

Comprehensive Analysis of a cis-Regulatory Region Reveals Pleiotropy in Enhancer Function.

Preger-Ben Noon E, Sabarís G, Ortiz DM, Sager J, Liebowitz A, Stern DL, Frankel N.

Cell Rep. 2018 Mar 13;22(11):3021-3031. doi: 10.1016/j.celrep.2018.02.073.

10.

Editorial overview: Making evolutionary sense of everything.

Stern DL, Haag E.

Curr Opin Genet Dev. 2017 Dec;47:iv-vi. doi: 10.1016/j.gde.2017.11.005. No abstract available.

PMID:
29203086
11.

Nuclear microenvironments modulate transcription from low-affinity enhancers.

Tsai A, Muthusamy AK, Alves MR, Lavis LD, Singer RH, Stern DL, Crocker J.

Elife. 2017 Nov 2;6. pii: e28975. doi: 10.7554/eLife.28975.

12.

Experimental and statistical reevaluation provides no evidence for Drosophila courtship song rhythms.

Stern DL, Clemens J, Coen P, Calhoun AJ, Hogenesch JB, Arthur BJ, Murthy M.

Proc Natl Acad Sci U S A. 2017 Sep 12;114(37):9978-9983. doi: 10.1073/pnas.1707471114. Epub 2017 Aug 29.

13.

Functional regulatory evolution outside of the minimal even-skipped stripe 2 enhancer.

Crocker J, Stern DL.

Development. 2017 Sep 1;144(17):3095-3101. doi: 10.1242/dev.149427. Epub 2017 Jul 31.

14.

Genetic and Transgenic Reagents for Drosophila simulans, D. mauritiana, D. yakuba, D. santomea, and D. virilis.

Stern DL, Crocker J, Ding Y, Frankel N, Kappes G, Kim E, Kuzmickas R, Lemire A, Mast JD, Picard S.

G3 (Bethesda). 2017 Apr 3;7(4):1339-1347. doi: 10.1534/g3.116.038885.

15.

An unsupervised method for quantifying the behavior of paired animals.

Klibaite U, Berman GJ, Cande J, Stern DL, Shaevitz JW.

Phys Biol. 2017 Feb 16;14(1):015006. doi: 10.1088/1478-3975/aa5c50.

16.

A Fully Synthetic Transcriptional Platform for a Multicellular Eukaryote.

Crocker J, Tsai A, Stern DL.

Cell Rep. 2017 Jan 3;18(1):287-296. doi: 10.1016/j.celrep.2016.12.025.

17.

Evolved Repression Overcomes Enhancer Robustness.

Preger-Ben Noon E, Davis FP, Stern DL.

Dev Cell. 2016 Dec 5;39(5):572-584. doi: 10.1016/j.devcel.2016.10.010. Epub 2016 Nov 10.

18.

Natural courtship song variation caused by an intronic retroelement in an ion channel gene.

Ding Y, Berrocal A, Morita T, Longden KD, Stern DL.

Nature. 2016 Aug 18;536(7616):329-32. Epub 2016 Aug 10.

PMID:
27509856
19.

Doublesex Regulates the Connectivity of a Neural Circuit Controlling Drosophila Male Courtship Song.

Shirangi TR, Wong AM, Truman JW, Stern DL.

Dev Cell. 2016 Jun 20;37(6):533-44. doi: 10.1016/j.devcel.2016.05.012.

20.

The Soft Touch: Low-Affinity Transcription Factor Binding Sites in Development and Evolution.

Crocker J, Noon EP, Stern DL.

Curr Top Dev Biol. 2016;117:455-69. doi: 10.1016/bs.ctdb.2015.11.018. Epub 2016 Jan 7. Review.

PMID:
26969995
21.

Quantitatively predictable control of Drosophila transcriptional enhancers in vivo with engineered transcription factors.

Crocker J, Ilsley GR, Stern DL.

Nat Genet. 2016 Mar;48(3):292-8. doi: 10.1038/ng.3509. Epub 2016 Feb 8.

PMID:
26854918
22.

A Major Locus Controls a Genital Shape Difference Involved in Reproductive Isolation Between Drosophila yakuba and Drosophila santomea.

Peluffo AE, Nuez I, Debat V, Savisaar R, Stern DL, Orgogozo V.

G3 (Bethesda). 2015 Oct 28;5(12):2893-901. doi: 10.1534/g3.115.023481.

23.

Genetic architecture and functional characterization of genes underlying the rapid diversification of male external genitalia between Drosophila simulans and Drosophila mauritiana.

Tanaka KM, Hopfen C, Herbert MR, Schlötterer C, Stern DL, Masly JP, McGregor AP, Nunes MD.

Genetics. 2015 May;200(1):357-69. doi: 10.1534/genetics.114.174045. Epub 2015 Mar 16.

24.

Low affinity binding site clusters confer hox specificity and regulatory robustness.

Crocker J, Abe N, Rinaldi L, McGregor AP, Frankel N, Wang S, Alsawadi A, Valenti P, Plaza S, Payre F, Mann RS, Stern DL.

Cell. 2015 Jan 15;160(1-2):191-203. doi: 10.1016/j.cell.2014.11.041. Epub 2014 Dec 31.

25.

Gene expression analysis of parthenogenetic embryonic development of the pea aphid, Acyrthosiphon pisum, suggests that aphid parthenogenesis evolved from meiotic oogenesis.

Srinivasan DG, Abdelhady A, Stern DL.

PLoS One. 2014 Dec 12;9(12):e115099. doi: 10.1371/journal.pone.0115099. eCollection 2014.

26.

Evolved differences in larval social behavior mediated by novel pheromones.

Mast JD, De Moraes CM, Alborn HT, Lavis LD, Stern DL.

Elife. 2014 Dec 12;3:e04205. doi: 10.7554/eLife.04205.

27.

Identification of loci that cause phenotypic variation in diverse species with the reciprocal hemizygosity test.

Stern DL.

Trends Genet. 2014 Dec;30(12):547-54. doi: 10.1016/j.tig.2014.09.006. Epub 2014 Sep 30. Review.

PMID:
25278102
28.

Looking under the lamp post: neither fruitless nor doublesex has evolved to generate divergent male courtship in Drosophila.

Cande J, Stern DL, Morita T, Prud'homme B, Gompel N.

Cell Rep. 2014 Jul 24;8(2):363-70. doi: 10.1016/j.celrep.2014.06.023. Epub 2014 Jul 10.

29.

Reported Drosophila courtship song rhythms are artifacts of data analysis.

Stern DL.

BMC Biol. 2014 Jun 26;12:38. doi: 10.1186/1741-7007-12-38.

30.

Cellular and behavioral functions of fruitless isoforms in Drosophila courtship.

von Philipsborn AC, Jörchel S, Tirian L, Demir E, Morita T, Stern DL, Dickson BJ.

Curr Biol. 2014 Feb 3;24(3):242-51. doi: 10.1016/j.cub.2013.12.015. Epub 2014 Jan 16.

31.

The structure and evolution of cis-regulatory regions: the shavenbaby story.

Stern DL, Frankel N.

Philos Trans R Soc Lond B Biol Sci. 2013 Nov 11;368(1632):20130028. doi: 10.1098/rstb.2013.0028. Print 2013 Dec 19. Review.

32.

Motor control of Drosophila courtship song.

Shirangi TR, Stern DL, Truman JW.

Cell Rep. 2013 Nov 14;5(3):678-86. doi: 10.1016/j.celrep.2013.09.039. Epub 2013 Oct 31.

33.

The genetic causes of convergent evolution.

Stern DL.

Nat Rev Genet. 2013 Nov;14(11):751-64. doi: 10.1038/nrg3483. Epub 2013 Oct 9. Review.

PMID:
24105273
34.

Pupariation site preference within and between Drosophila sibling species.

Erezyilmaz DF, Stern DL.

Evolution. 2013 Sep;67(9):2714-27. doi: 10.1111/evo.12146. Epub 2013 May 22.

PMID:
24033178
35.

TALE-mediated modulation of transcriptional enhancers in vivo.

Crocker J, Stern DL.

Nat Methods. 2013 Aug;10(8):762-7. doi: 10.1038/nmeth.2543. Epub 2013 Jun 30.

36.

The pea aphid uses a version of the terminal system during oviparous, but not viviparous, development.

Bickel RD, Cleveland HC, Barkas J, Jeschke CC, Raz AA, Stern DL, Davis GK.

Evodevo. 2013 Apr 3;4(1):10. doi: 10.1186/2041-9139-4-10.

37.

Multi-channel acoustic recording and automated analysis of Drosophila courtship songs.

Arthur BJ, Sunayama-Morita T, Coen P, Murthy M, Stern DL.

BMC Biol. 2013 Jan 31;11:11. doi: 10.1186/1741-7007-11-11.

38.

Conserved regulatory architecture underlies parallel genetic changes and convergent phenotypic evolution.

Frankel N, Wang S, Stern DL.

Proc Natl Acad Sci U S A. 2012 Dec 18;109(51):20975-9. doi: 10.1073/pnas.1207715109. Epub 2012 Nov 29.

39.

Aphids evolved novel secreted proteins for symbiosis with bacterial endosymbiont.

Shigenobu S, Stern DL.

Proc Biol Sci. 2013 Jan 7;280(1750):20121952. doi: 10.1098/rspb.2012.1952.

40.

Evolution of multiple additive loci caused divergence between Drosophila yakuba and D. santomea in wing rowing during male courtship.

Cande J, Andolfatto P, Prud'homme B, Stern DL, Gompel N.

PLoS One. 2012;7(8):e43888. doi: 10.1371/journal.pone.0043888. Epub 2012 Aug 30.

41.

Preparation and mounting of adult Drosophila structures in Canada balsam.

Stern DL, Sucena E.

Cold Spring Harb Protoc. 2012 Mar 1;2012(3):373-5. doi: 10.1101/pdb.prot067389.

PMID:
22383636
42.

Rapid mounting of adult Drosophila structures in Hoyer's medium.

Stern DL, Sucena E.

Cold Spring Harb Protoc. 2012 Jan 1;2012(1):107-9. doi: 10.1101/pdb.prot067371.

PMID:
22194256
43.

Preparation of cuticles from feeding Drosophila larvae.

Stern DL, Sucena E.

Cold Spring Harb Protoc. 2011 Nov 1;2011(11):1394-8. doi: 10.1101/pdb.prot066498.

PMID:
22046031
44.

Preparation of cuticles from unhatched first-instar Drosophila larvae.

Stern DL, Sucena E.

Cold Spring Harb Protoc. 2011 Sep 1;2011(9). pii: pdb.prot065532. doi: 10.1101/pdb.prot065532.

PMID:
21880820
45.

Morphological evolution caused by many subtle-effect substitutions in regulatory DNA.

Frankel N, Erezyilmaz DF, McGregor AP, Wang S, Payre F, Stern DL.

Nature. 2011 Jun 29;474(7353):598-603. doi: 10.1038/nature10200.

46.

Multiplexed shotgun genotyping for rapid and efficient genetic mapping.

Andolfatto P, Davison D, Erezyilmaz D, Hu TT, Mast J, Sunayama-Morita T, Stern DL.

Genome Res. 2011 Apr;21(4):610-7. doi: 10.1101/gr.115402.110. Epub 2011 Jan 13.

47.

Phenotypic robustness conferred by apparently redundant transcriptional enhancers.

Frankel N, Davis GK, Vargas D, Wang S, Payre F, Stern DL.

Nature. 2010 Jul 22;466(7305):490-3. doi: 10.1038/nature09158. Epub 2010 May 30.

48.

Comprehensive survey of developmental genes in the pea aphid, Acyrthosiphon pisum: frequent lineage-specific duplications and losses of developmental genes.

Shigenobu S, Bickel RD, Brisson JA, Butts T, Chang CC, Christiaens O, Davis GK, Duncan EJ, Ferrier DE, Iga M, Janssen R, Lin GW, Lu HL, McGregor AP, Miura T, Smagghe G, Smith JM, van der Zee M, Velarde RA, Wilson MJ, Dearden PK, Stern DL.

Insect Mol Biol. 2010 Mar;19 Suppl 2:47-62. doi: 10.1111/j.1365-2583.2009.00944.x.

PMID:
20482639
49.

A full-length cDNA resource for the pea aphid, Acyrthosiphon pisum.

Shigenobu S, Richards S, Cree AG, Morioka M, Fukatsu T, Kudo T, Miyagishima S, Gibbs RA, Stern DL, Nakabachi A.

Insect Mol Biol. 2010 Mar;19 Suppl 2:23-31. doi: 10.1111/j.1365-2583.2009.00946.x.

50.

Michael Akam and the rise of evolutionary developmental biology.

Stern DL, Dawes-Hoang RE.

Int J Dev Biol. 2010;54(4):561-5. doi: 10.1387/ijdb.092908ds.

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