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Items: 1 to 50 of 99

1.

VarSite: Disease variants and protein structure.

Laskowski RA, Stephenson JD, Sillitoe I, Orengo CA, Thornton JM.

Protein Sci. 2020 Jan;29(1):111-119. doi: 10.1002/pro.3746. Epub 2019 Oct 27.

2.

VarMap: a web tool for mapping genomic coordinates to protein sequence and structure and retrieving protein structural annotations.

Stephenson JD, Laskowski RA, Nightingale A, Hurles ME, Thornton JM.

Bioinformatics. 2019 Nov 1;35(22):4854-4856. doi: 10.1093/bioinformatics/btz482.

3.

Quantifying the contribution of recessive coding variation to developmental disorders.

Martin HC, Jones WD, McIntyre R, Sanchez-Andrade G, Sanderson M, Stephenson JD, Jones CP, Handsaker J, Gallone G, Bruntraeger M, McRae JF, Prigmore E, Short P, Niemi M, Kaplanis J, Radford EJ, Akawi N, Balasubramanian M, Dean J, Horton R, Hulbert A, Johnson DS, Johnson K, Kumar D, Lynch SA, Mehta SG, Morton J, Parker MJ, Splitt M, Turnpenny PD, Vasudevan PC, Wright M, Bassett A, Gerety SS, Wright CF, FitzPatrick DR, Firth HV, Hurles ME, Barrett JC; Deciphering Developmental Disorders Study.

Science. 2018 Dec 7;362(6419):1161-1164. doi: 10.1126/science.aar6731. Epub 2018 Nov 8.

4.

Evolution of ribozymes in the presence of a mineral surface.

Stephenson JD, Popović M, Bristow TF, Ditzler MA.

RNA. 2016 Dec;22(12):1893-1901. Epub 2016 Oct 28.

5.

Characterizing 3D RNA structure by single molecule FRET.

Stephenson JD, Kenyon JC, Symmons MF, Lever AM.

Methods. 2016 Jul 1;103:57-67. doi: 10.1016/j.ymeth.2016.02.004. Epub 2016 Feb 4. Review.

PMID:
26853327
6.

Boron enrichment in martian clay.

Stephenson JD, Hallis LJ, Nagashima K, Freeland SJ.

PLoS One. 2013 Jun 6;8(6):e64624. doi: 10.1371/journal.pone.0064624. Print 2013.

7.

Unearthing the root of amino acid similarity.

Stephenson JD, Freeland SJ.

J Mol Evol. 2013 Oct;77(4):159-69. doi: 10.1007/s00239-013-9565-0. Epub 2013 Jun 7.

8.

Three-dimensional RNA structure of the major HIV-1 packaging signal region.

Stephenson JD, Li H, Kenyon JC, Symmons M, Klenerman D, Lever AM.

Structure. 2013 Jun 4;21(6):951-62. doi: 10.1016/j.str.2013.04.008. Epub 2013 May 16.

9.

Geochemistry of mineral licks at Loskop Dam Nature Reserve, Mpumalanga, South Africa.

Stephenson JD, Mills A, Eksteen JJ, Milewski AV, Myburgh JG.

Environ Geochem Health. 2011 Feb;33(1):49-53. doi: 10.1007/s10653-010-9313-y. Epub 2010 May 16.

PMID:
20473705
10.

X11beta rescues memory and long-term potentiation deficits in Alzheimer's disease APPswe Tg2576 mice.

Mitchell JC, Ariff BB, Yates DM, Lau KF, Perkinton MS, Rogelj B, Stephenson JD, Miller CC, McLoughlin DM.

Hum Mol Genet. 2009 Dec 1;18(23):4492-500. doi: 10.1093/hmg/ddp408. Epub 2009 Sep 10.

11.

Theta driving both inhibits and potentiates the effects of nicotine on dentate gyrus responses.

Markevich VA, Grigoryan GA, Dawe GS, Stephenson JD.

Neurosci Behav Physiol. 2007 May;37(4):403-9.

PMID:
17457536
12.

Biphasic effects of atropine on sensory-evoked hippocampal rhythmical slow activity in urethane-anaesthetized rats.

Dawe GS, Markevich VA, Zarei M, Grigoryan GA, Stephenson JD.

Zh Vyssh Nerv Deiat Im I P Pavlova. 2006 Mar-Apr;56(2):264-73.

PMID:
16756135
13.

Theta driving both inhibits and potentiates the effects of nicotine on dentate gyrus responses.

Markevich VA, Grigoryan GA, Dawe GS, Stephenson JD.

Zh Vyssh Nerv Deiat Im I P Pavlova. 2006 Mar-Apr;56(2):257-63.

PMID:
16756134
14.

Combination of traumatic thoracic aortic pseudoaneurysm and myocardial contusion leading to left ventricular aneurysm.

Stephenson JD, Hulse MA.

Pediatr Radiol. 2006 Mar;36(3):258-62. Epub 2005 Dec 6.

PMID:
16331451
15.

Enhancement of latent inhibition by two 5-HT2A receptor antagonists only when given at both pre-exposure and conditioning.

McDonald LM, Moran PM, Vythelingum GN, Joseph MH, Stephenson JD, Gray JA.

Psychopharmacology (Berl). 2003 Sep;169(3-4):321-31. Epub 2002 Aug 9.

PMID:
14530903
16.

Latent inhibition is attenuated by noise and partially restored by a 5-HT2A receptor antagonist.

McDonald LM, Moran PM, Vythelingum GN, Joseph MH, Stephenson JD, Gray JA.

Behav Pharmacol. 2002 Dec;13(8):663-7.

PMID:
12478218
18.

Central noradrenergic blockade prevents autotomy in rat: implication for pharmacological prevention of postdenervation pain syndrome.

Al-Adawi S, Dawe GS, Bonner A, Stephenson JD, Zarei M.

Brain Res Bull. 2002 Mar 15;57(5):581-6.

PMID:
11927359
19.

Changes in sensitivity of cholinoceptors and adrenoceptors during transhemispheric cortical reorganisation in rat SmI.

Zarei M, Raevsky VV, Dawe GS, Stephenson JD.

Brain Res. 2001 Jan 12;888(2):267-274.

PMID:
11150484
20.
22.

Nicotine induces long-lasting potentiation in the dentate gyrus of nicotine-primed rats.

Hamid S, Dawe GS, Gray JA, Stephenson JD.

Neurosci Res. 1997 Sep;29(1):81-5.

PMID:
9293495
23.

Cholinergic facilitation and inhibition of long-term potentiation of CA1 in the urethane-anaesthetized rats.

Markevich V, Scorsa AM, Dawe GS, Stephenson JD.

Brain Res. 1997 Apr 18;754(1-2):95-102.

PMID:
9134964
24.

Changes in paired-pulse facilitation correlate with induction of long-term potentiation in area CA1 of rat hippocampal slices.

Kleschevnikov AM, Sokolov MV, Kuhnt U, Dawe GS, Stephenson JD, Voronin LL.

Neuroscience. 1997 Feb;76(3):829-43.

PMID:
9135055
27.
29.

Ipsilateral and bilateral receptive fields in rat primary somatosensory cortex.

Zarei M, Stephenson JD.

Neuroreport. 1996 Jan 31;7(2):647-51.

PMID:
8730849
31.

Resuscitative interventions and "no-CPR" orders.

Stephenson JD.

CMAJ. 1995 Feb 15;152(4):463; author reply 464. No abstract available.

32.

Importance of forebrain cholinergic and GABAergic systems to the age-related deficits in water maze performance of rats.

Abdulla FA, Abu-Bakra MA, Calaminici MR, Stephenson JD, Sinden JD.

Neurobiol Aging. 1995 Jan-Feb;16(1):41-52.

PMID:
7723934
33.
35.
36.

Further evidence for a functional dorsal-ventral division of the rat striatum: GABAergic involvement in oral movements.

Kikuchi de Beltrán K, Koshikawa N, Miwa Y, Kobayashi M, Stephenson JD.

Eur J Pharmacol. 1993 Aug 3;239(1-3):47-54.

PMID:
8223913
37.

Direct evidence for axonal outgrowth from cholinergic grafts to cholinergically-deafferented rat cortex.

Calaminici M, Abdulla FA, Sinden JD, Stephenson JD.

Neuroreport. 1993 May;4(5):585-7.

PMID:
7685643
38.

Chronic treatments with cholinoceptor drugs influence spatial learning in rats.

Abdulla FA, Calaminici MR, Stephenson JD, Sinden JD.

Psychopharmacology (Berl). 1993;111(4):508-11.

PMID:
7870995
39.

An AP-1-like motif in the first intron of human Pro alpha 1(I) collagen gene is a critical determinant of its transcriptional activity.

Katai H, Stephenson JD, Simkevich CP, Thompson JP, Raghow R.

Mol Cell Biochem. 1992 Dec 16;118(2):119-29.

PMID:
1293507
40.

Production of limbic motor seizures and brain damage by systemic and intracerebral injections of paraquat in rats.

Bagetta G, Corasaniti MT, Iannone M, Nisticò G, Stephenson JD.

Pharmacol Toxicol. 1992 Dec;71(6):443-8.

PMID:
1480553
41.

Effects of tetrahydro-9-aminoacridine on the electrocorticogram of rats with a unilateral lesion of the nucleus basalis magnocellularis.

Abdulla F, Dawe G, Scorsa AM, Rispoli V, Stephenson JD.

Funct Neurol. 1992 Mar-Apr;7(2):141-4.

PMID:
1376709
42.

Cholecystokinin octapeptide and caerulein injection into the dorsomedial nucleus accumbens potentiate apomorphine-induced jaw movements in rats.

Koshikawa N, Kikuchi de Beltrán K, Saigusa T, Kobayashi M, Stephenson JD.

Eur J Pharmacol. 1991 Dec 10;209(1-2):75-80.

PMID:
1814762
44.

Pharmacology of the central control of micturition.

Stephenson JD.

Funct Neurol. 1991 Jul-Sep;6(3):211-7. Review.

PMID:
1683851
45.
46.

The effect of chronic ritanserin and clorgyline administration on 5-HT2 receptor linked inositol phospholipid hydrolysis.

Twist EC, Brammer MJ, Stephenson JD, Corn TH, Campbell IC.

Biochem Pharmacol. 1990 Nov 1;40(9):2111-6.

PMID:
2122900
47.

Further evidence for an anomalous regulation of cortical 5-HT2 receptors: studies with 5-HT precursors.

Koshikawa N, Koshikawa F, Stephenson JD.

Eur J Pharmacol. 1990 Mar 27;178(3):365-9.

PMID:
2340865
48.

Production of wet-dog shakes in rats and down-regulation of spinal 5-HT2 receptors.

Koshikawa N, Maruyama Y, Stephenson JD.

Eur J Pharmacol. 1989 May 30;164(3):595-8.

PMID:
2527756
49.

Effects of intrastriatal injections of selective dopamine D-1 and D-2 agonists and antagonists on jaw movements of rats.

Koshikawa N, Aoki S, Hiruta M, Tomiyama K, Kobayashi M, Tsuboi Y, Iwata K, Sumino R, Stephenson JD.

Eur J Pharmacol. 1989 Apr 25;163(2-3):227-36.

PMID:
2566502
50.

Changes in cortical 5-HT2 receptors following 5-HTP and paroxetine administration in rats.

Koshikawa N, Maruyama Y, Oka K, Nomura H, Mori E, Kobayashi M, Stephenson JD.

J Nihon Univ Sch Dent. 1988 Sep;30(3):218-26. No abstract available.

PMID:
2974070

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