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Items: 1 to 50 of 259

1.

Selective Sweeps.

Stephan W.

Genetics. 2019 Jan;211(1):5-13. doi: 10.1534/genetics.118.301319. Review.

PMID:
30626638
2.

The importance of the Neutral Theory in 1968 and 50 years on: A response to Kern and Hahn 2018.

Jensen JD, Payseur BA, Stephan W, Aquadro CF, Lynch M, Charlesworth D, Charlesworth B.

Evolution. 2019 Jan;73(1):111-114. doi: 10.1111/evo.13650. Epub 2018 Nov 27.

PMID:
30460993
3.

Signatures of natural selection in abiotic stress-responsive genes of Solanum chilense.

Böndel KB, Nosenko T, Stephan W.

R Soc Open Sci. 2018 Jan 17;5(1):171198. doi: 10.1098/rsos.171198. eCollection 2018 Jan.

4.

Evolution of highly fecund haploid populations.

Eldon B, Stephan W.

Theor Popul Biol. 2018 Feb;119:48-56. doi: 10.1016/j.tpb.2017.10.002. Epub 2017 Oct 31.

PMID:
29111301
5.

Modes of Rapid Polygenic Adaptation.

Jain K, Stephan W.

Mol Biol Evol. 2017 Dec 1;34(12):3169-3175. doi: 10.1093/molbev/msx240.

PMID:
28961935
6.

Calls to Florida Poison Control Centers about mercury: Trends over 2003-2013.

Gribble MO, Deshpande A, Stephan WB, Hunter CM, Weisman RS.

Environ Res. 2017 Nov;159:422-426. doi: 10.1016/j.envres.2017.08.030. Epub 2017 Sep 18.

7.

Rapid Adaptation of a Polygenic Trait After a Sudden Environmental Shift.

Jain K, Stephan W.

Genetics. 2017 May;206(1):389-406. doi: 10.1534/genetics.116.196972. Epub 2017 Mar 24.

8.

An Updated Review of Ciguatera Fish Poisoning: Clinical, Epidemiological, Environmental, and Public Health Management.

Friedman MA, Fernandez M, Backer LC, Dickey RW, Bernstein J, Schrank K, Kibler S, Stephan W, Gribble MO, Bienfang P, Bowen RE, Degrasse S, Flores Quintana HA, Loeffler CR, Weisman R, Blythe D, Berdalet E, Ayyar R, Clarkson-Townsend D, Swajian K, Benner R, Brewer T, Fleming LE.

Mar Drugs. 2017 Mar 14;15(3). pii: E72. doi: 10.3390/md15030072. Review.

9.

A genome-wide scan for genes under balancing selection in Drosophila melanogaster.

Croze M, Wollstein A, Božičević V, Živković D, Stephan W, Hutter S.

BMC Evol Biol. 2017 Jan 13;17(1):15. doi: 10.1186/s12862-016-0857-z.

10.

Canalization of gene expression is a major signature of regulatory cold adaptation in temperate Drosophila melanogaster.

von Heckel K, Stephan W, Hutter S.

BMC Genomics. 2016 Aug 8;17:574. doi: 10.1186/s12864-016-2866-0.

11.

Balancing selection on immunity genes: review of the current literature and new analysis in Drosophila melanogaster.

Croze M, Živković D, Stephan W, Hutter S.

Zoology (Jena). 2016 Aug;119(4):322-9. doi: 10.1016/j.zool.2016.03.004. Epub 2016 Mar 17. Review.

12.

Adaptation to low temperatures in the wild tomato species Solanum chilense.

Nosenko T, Böndel KB, Kumpfmüller G, Stephan W.

Mol Ecol. 2016 Jun;25(12):2853-69. doi: 10.1111/mec.13637. Epub 2016 May 21.

PMID:
27037798
13.

Enhanced Memory for both Threat and Neutral Information Under Conditions of Intergroup Threat.

Zhu Y, Zhao Y, Ybarra O, Stephan WG, Yang Q.

Front Psychol. 2015 Nov 17;6:1759. doi: 10.3389/fpsyg.2015.01759. eCollection 2015.

14.

Population genetic evidence for cold adaptation in European Drosophila melanogaster populations.

Božičević V, Hutter S, Stephan W, Wollstein A.

Mol Ecol. 2016 Mar;25(5):1175-91. doi: 10.1111/mec.13464. Epub 2016 Jan 18.

PMID:
26558479
15.

A model of compensatory molecular evolution involving multiple sites in RNA molecules.

Kusumi J, Ichinose M, Takefu M, Piskol R, Stephan W, Iizuka M.

J Theor Biol. 2016 Jan 7;388:96-107. doi: 10.1016/j.jtbi.2015.10.008. Epub 2015 Oct 24.

PMID:
26506471
16.

Normal Doppler Reference Values of the Pericallosal Artery.

Pashaj S, Merz E, Wellek S.

Ultraschall Med. 2015 Aug;36(4):375-80. doi: 10.1055/s-0035-1553321. Epub 2015 Aug 4. Erratum in: Ultraschall Med. 2015 Aug;36(4):E1. Stephan, W [Corrected to Wellek, S].

PMID:
26241119
17.

North-South Colonization Associated with Local Adaptation of the Wild Tomato Species Solanum chilense.

Böndel KB, Lainer H, Nosenko T, Mboup M, Tellier A, Stephan W.

Mol Biol Evol. 2015 Nov;32(11):2932-43. doi: 10.1093/molbev/msv166. Epub 2015 Jul 30.

PMID:
26232423
18.

Survival Rate and Transcriptional Response upon Infection with the Generalist Parasite Beauveria bassiana in a World-Wide Sample of Drosophila melanogaster.

Paparazzo F, Tellier A, Stephan W, Hutter S.

PLoS One. 2015 Jul 8;10(7):e0132129. doi: 10.1371/journal.pone.0132129. eCollection 2015.

19.

Signatures of positive selection: from selective sweeps at individual loci to subtle allele frequency changes in polygenic adaptation.

Stephan W.

Mol Ecol. 2016 Jan;25(1):79-88. doi: 10.1111/mec.13288. Epub 2015 Jul 27. Review.

PMID:
26108992
20.

Transition Densities and Sample Frequency Spectra of Diffusion Processes with Selection and Variable Population Size.

Živković D, Steinrücken M, Song YS, Stephan W.

Genetics. 2015 Jun;200(2):601-17. doi: 10.1534/genetics.115.175265. Epub 2015 Apr 14.

21.

Positive Selection at the Polyhomeotic Locus Led to Decreased Thermosensitivity of Gene Expression in Temperate Drosophila melanogaster.

Voigt S, Laurent S, Litovchenko M, Stephan W.

Genetics. 2015 Jun;200(2):591-9. doi: 10.1534/genetics.115.177030. Epub 2015 Apr 8.

22.

Inferring positive selection in humans from genomic data.

Wollstein A, Stephan W.

Investig Genet. 2015 Apr 1;6:5. doi: 10.1186/s13323-015-0023-1. eCollection 2015.

23.

Response of Polygenic Traits Under Stabilizing Selection and Mutation When Loci Have Unequal Effects.

Jain K, Stephan W.

G3 (Bethesda). 2015 Mar 31;5(6):1065-74. doi: 10.1534/g3.115.017970.

24.

Adaptive fixation in two-locus models of stabilizing selection and genetic drift.

Wollstein A, Stephan W.

Genetics. 2014 Oct;198(2):685-97. doi: 10.1534/genetics.114.168567. Epub 2014 Aug 4.

25.

Epistatic selection and coadaptation in the Prf resistance complex of wild tomato.

Grzeskowiak L, Stephan W, Rose LE.

Infect Genet Evol. 2014 Oct;27:456-71. doi: 10.1016/j.meegid.2014.06.019. Epub 2014 Jul 2.

PMID:
24997333
26.

Fine-mapping and selective sweep analysis of QTL for cold tolerance in Drosophila melanogaster.

Wilches R, Voigt S, Duchen P, Laurent S, Stephan W.

G3 (Bethesda). 2014 Jun 26;4(9):1635-45. doi: 10.1534/g3.114.012757.

27.

Intergroup Anxiety: Theory, Research, and Practice.

Stephan WG.

Pers Soc Psychol Rev. 2014 Aug;18(3):239-255. Epub 2014 May 9.

PMID:
24815215
28.

Speed of adaptation and genomic footprints of host-parasite coevolution under arms race and trench warfare dynamics.

Tellier A, Moreno-Gámez S, Stephan W.

Evolution. 2014 Aug;68(8):2211-24. doi: 10.1111/evo.12427. Epub 2014 May 21.

PMID:
24749791
29.

Sequence evolution and expression regulation of stress-responsive genes in natural populations of wild tomato.

Fischer I, Steige KA, Stephan W, Mboup M.

PLoS One. 2013 Oct 18;8(10):e78182. doi: 10.1371/journal.pone.0078182. eCollection 2013.

30.

Selective sweep in the Flotillin-2 region of European Drosophila melanogaster.

Werzner A, Pavlidis P, Ometto L, Stephan W, Laurent S.

PLoS One. 2013;8(2):e56629. doi: 10.1371/journal.pone.0056629. Epub 2013 Feb 21.

31.

Paleo-Balkan and Slavic contributions to the genetic pool of Moldavians: insights from the Y chromosome.

Varzari A, Kharkov V, Nikitin AG, Raicu F, Simonova K, Stephan W, Weiss EH, Stepanov V.

PLoS One. 2013;8(1):e53731. doi: 10.1371/journal.pone.0053731. Epub 2013 Jan 16.

32.

Demographic inference reveals African and European admixture in the North American Drosophila melanogaster population.

Duchen P, Zivkovic D, Hutter S, Stephan W, Laurent S.

Genetics. 2013 Jan;193(1):291-301. doi: 10.1534/genetics.112.145912. Epub 2012 Nov 12.

33.

Balancing selection at the tomato RCR3 Guardee gene family maintains variation in strength of pathogen defense.

Hörger AC, Ilyas M, Stephan W, Tellier A, van der Hoorn RA, Rose LE.

PLoS Genet. 2012;8(7):e1002813. doi: 10.1371/journal.pgen.1002813. Epub 2012 Jul 19.

34.

Trans-species polymorphism and allele-specific expression in the CBF gene family of wild tomatoes.

Mboup M, Fischer I, Lainer H, Stephan W.

Mol Biol Evol. 2012 Dec;29(12):3641-52. doi: 10.1093/molbev/mss176. Epub 2012 Jul 10.

PMID:
22787283
35.

Selective sweeps in multilocus models of quantitative traits.

Pavlidis P, Metzler D, Stephan W.

Genetics. 2012 Sep;192(1):225-39. doi: 10.1534/genetics.112.142547. Epub 2012 Jun 19.

36.

A critical assessment of storytelling: gene ontology categories and the importance of validating genomic scans.

Pavlidis P, Jensen JD, Stephan W, Stamatakis A.

Mol Biol Evol. 2012 Oct;29(10):3237-48. Epub 2012 May 21.

PMID:
22617950
37.

Inference of seed bank parameters in two wild tomato species using ecological and genetic data.

Tellier A, Laurent SJ, Lainer H, Pavlidis P, Stephan W.

Proc Natl Acad Sci U S A. 2011 Oct 11;108(41):17052-7. doi: 10.1073/pnas.1111266108. Epub 2011 Sep 26.

38.

Targets of selection in a disease resistance network in wild tomatoes.

Rose LE, Grzeskowiak L, Hörger AC, Groth M, Stephan W.

Mol Plant Pathol. 2011 Dec;12(9):921-7. doi: 10.1111/j.1364-3703.2011.00720.x. Epub 2011 May 12.

PMID:
21726387
39.

Feasibility and findings of large-scale electrocardiographic screening in young adults: data from 32,561 subjects.

Marek J, Bufalino V, Davis J, Marek K, Gami A, Stephan W, Zimmerman F.

Heart Rhythm. 2011 Oct;8(10):1555-9. doi: 10.1016/j.hrthm.2011.04.024. Epub 2011 Apr 23.

PMID:
21699835
40.

The role of the effective population size in compensatory evolution.

Piskol R, Stephan W.

Genome Biol Evol. 2011;3:528-38. doi: 10.1093/gbe/evr057. Epub 2011 Jun 16.

41.

Estimating parameters of speciation models based on refined summaries of the joint site-frequency spectrum.

Tellier A, Pfaffelhuber P, Haubold B, Naduvilezhath L, Rose LE, Städler T, Stephan W, Metzler D.

PLoS One. 2011;6(5):e18155. doi: 10.1371/journal.pone.0018155. Epub 2011 May 26.

42.

Detecting strong positive selection in the genome.

Stephan W.

Mol Ecol Resour. 2010 Sep;10(5):863-72. doi: 10.1111/j.1755-0998.2010.02869.x. Epub 2010 May 17.

PMID:
21565097
43.

msABC: a modification of Hudson's ms to facilitate multi-locus ABC analysis.

Pavlidis P, Laurent S, Stephan W.

Mol Ecol Resour. 2010 Jul;10(4):723-7. doi: 10.1111/j.1755-0998.2010.02832.x. Epub 2010 Feb 2.

PMID:
21565078
44.

Frontiers in Outreach and Education: The Florida Red Tide Experience.

Nierenberg K, Hollenbeck J, Fleming LE, Stephan W, Reich A, Backer LC, Currier R, Kirkpatrick B.

Harmful Algae. 2011 May 1;10(4):374-380.

45.

Analytical results on the neutral non-equilibrium allele frequency spectrum based on diffusion theory.

Živković D, Stephan W.

Theor Popul Biol. 2011 Jun;79(4):184-91. doi: 10.1016/j.tpb.2011.03.003. Epub 2011 Mar 21.

PMID:
21426909
46.

Adaptation to drought in two wild tomato species: the evolution of the Asr gene family.

Fischer I, Camus-Kulandaivelu L, Allal F, Stephan W.

New Phytol. 2011 Jun;190(4):1032-44. doi: 10.1111/j.1469-8137.2011.03648.x. Epub 2011 Feb 17.

47.

Approximate Bayesian analysis of Drosophila melanogaster polymorphism data reveals a recent colonization of Southeast Asia.

Laurent SJ, Werzner A, Excoffier L, Stephan W.

Mol Biol Evol. 2011 Jul;28(7):2041-51. doi: 10.1093/molbev/msr031. Epub 2011 Feb 7.

PMID:
21300986
48.

Population transcriptomics of Drosophila melanogaster females.

Müller L, Hutter S, Stamboliyska R, Saminadin-Peter SS, Stephan W, Parsch J.

BMC Genomics. 2011 Jan 28;12:81. doi: 10.1186/1471-2164-12-81.

49.

Fitness effects of derived deleterious mutations in four closely related wild tomato species with spatial structure.

Tellier A, Fischer I, Merino C, Xia H, Camus-Kulandaivelu L, Städler T, Stephan W.

Heredity (Edinb). 2011 Sep;107(3):189-99. doi: 10.1038/hdy.2010.175. Epub 2011 Jan 19.

50.

Review of Florida Red Tide and Human Health Effects.

Fleming LE, Kirkpatrick B, Backer LC, Walsh CJ, Nierenberg K, Clark J, Reich A, Hollenbeck J, Benson J, Cheng YS, Naar J, Pierce R, Bourdelais AJ, Abraham WM, Kirkpatrick G, Zaias J, Wanner A, Mendes E, Shalat S, Hoagland P, Stephan W, Bean J, Watkins S, Clarke T, Byrne M, Baden DG.

Harmful Algae. 2011 Jan 1;10(2):224-233.

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