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Items: 8

1.

Pathway and gene-set activation measurement from mRNA expression data: the tissue distribution of human pathways.

Levine DM, Haynor DR, Castle JC, Stepaniants SB, Pellegrini M, Mao M, Johnson JM.

Genome Biol. 2006;7(10):R93. Epub 2006 Oct 17.

2.

Rosetta error model for gene expression analysis.

Weng L, Dai H, Zhan Y, He Y, Stepaniants SB, Bassett DE.

Bioinformatics. 2006 May 1;22(9):1111-21. Epub 2006 Mar 7.

PMID:
16522673
3.

Integrated genomic and proteomic analyses of gene expression in Mammalian cells.

Tian Q, Stepaniants SB, Mao M, Weng L, Feetham MC, Doyle MJ, Yi EC, Dai H, Thorsson V, Eng J, Goodlett D, Berger JP, Gunter B, Linseley PS, Stoughton RB, Aebersold R, Collins SJ, Hanlon WA, Hood LE.

Mol Cell Proteomics. 2004 Oct;3(10):960-9. Epub 2004 Jul 6.

4.

Signatures of environmental exposures using peripheral leukocyte gene expression: tobacco smoke.

Lampe JW, Stepaniants SB, Mao M, Radich JP, Dai H, Linsley PS, Friend SH, Potter JD.

Cancer Epidemiol Biomarkers Prev. 2004 Mar;13(3):445-53.

5.

Discovering modes of action for therapeutic compounds using a genome-wide screen of yeast heterozygotes.

Lum PY, Armour CD, Stepaniants SB, Cavet G, Wolf MK, Butler JS, Hinshaw JC, Garnier P, Prestwich GD, Leonardson A, Garrett-Engele P, Rush CM, Bard M, Schimmack G, Phillips JW, Roberts CJ, Shoemaker DD.

Cell. 2004 Jan 9;116(1):121-37.

6.

Microarray standard data set and figures of merit for comparing data processing methods and experiment designs.

He YD, Dai H, Schadt EE, Cavet G, Edwards SW, Stepaniants SB, Duenwald S, Kleinhanz R, Jones AR, Shoemaker DD, Stoughton RB.

Bioinformatics. 2003 May 22;19(8):956-65.

PMID:
12761058
7.

Functional discovery via a compendium of expression profiles.

Hughes TR, Marton MJ, Jones AR, Roberts CJ, Stoughton R, Armour CD, Bennett HA, Coffey E, Dai H, He YD, Kidd MJ, King AM, Meyer MR, Slade D, Lum PY, Stepaniants SB, Shoemaker DD, Gachotte D, Chakraburtty K, Simon J, Bard M, Friend SH.

Cell. 2000 Jul 7;102(1):109-26.

8.

Atomic- and electron-beam spectroscopy of rarefied semiquantum media.

Bashkin EP, Stepaniants SB.

Phys Rev B Condens Matter. 1995 Feb 1;51(5):3058-3070. No abstract available.

PMID:
9979089

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