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Items: 1 to 50 of 141

1.

Ultra-thin fluorocarbon foils optimise multiscale imaging of three-dimensional native and optically cleared specimens.

Hötte K, Koch M, Hof L, Tuppi M, Moreth T, Verstegen MMA, van der Laan LJW, Stelzer EHK, Pampaloni F.

Sci Rep. 2019 Nov 21;9(1):17292. doi: 10.1038/s41598-019-53380-2.

2.

An ancestral apical brain region contributes to the central complex under the control of foxQ2 in the beetle Tribolium.

He B, Buescher M, Farnworth MS, Strobl F, Stelzer EH, Koniszewski ND, Muehlen D, Bucher G.

Elife. 2019 Oct 18;8. pii: e49065. doi: 10.7554/eLife.49065.

3.

A GABAergic and peptidergic sleep neuron as a locomotion stop neuron with compartmentalized Ca2+ dynamics.

Steuer Costa W, Van der Auwera P, Glock C, Liewald JF, Bach M, Schüler C, Wabnig S, Oranth A, Masurat F, Bringmann H, Schoofs L, Stelzer EHK, Fischer SC, Gottschalk A.

Nat Commun. 2019 Sep 10;10(1):4095. doi: 10.1038/s41467-019-12098-5.

4.

Biglycan evokes autophagy in macrophages via a novel CD44/Toll-like receptor 4 signaling axis in ischemia/reperfusion injury.

Poluzzi C, Nastase MV, Zeng-Brouwers J, Roedig H, Hsieh LT, Michaelis JB, Buhl EM, Rezende F, Manavski Y, Bleich A, Boor P, Brandes RP, Pfeilschifter J, Stelzer EHK, Münch C, Dikic I, Brandts C, Iozzo RV, Wygrecka M, Schaefer L.

Kidney Int. 2019 Mar;95(3):540-562. doi: 10.1016/j.kint.2018.10.037. Epub 2019 Jan 31.

PMID:
30712922
5.

E-cadherin, actin, microtubules and FAK dominate different spheroid formation phases and important elements of tissue integrity.

Smyrek I, Mathew B, Fischer SC, Lissek SM, Becker S, Stelzer EHK.

Biol Open. 2019 Jan 24;8(1). pii: bio037051. doi: 10.1242/bio.037051.

6.

Mouse ICM Organoids Reveal Three-Dimensional Cell Fate Clustering.

Mathew B, Muñoz-Descalzo S, Corujo-Simon E, Schröter C, Stelzer EHK, Fischer SC.

Biophys J. 2019 Jan 8;116(1):127-141. doi: 10.1016/j.bpj.2018.11.011. Epub 2018 Nov 16.

7.

The molecular recognition of phosphatidic acid by an amphipathic helix in Opi1.

Hofbauer HF, Gecht M, Fischer SC, Seybert A, Frangakis AS, Stelzer EHK, Covino R, Hummer G, Ernst R.

J Cell Biol. 2018 Sep 3;217(9):3109-3126. doi: 10.1083/jcb.201802027. Epub 2018 Jun 25.

8.

A universal vector concept for a direct genotyping of transgenic organisms and a systematic creation of homozygous lines.

Strobl F, Anderl A, Stelzer EH.

Elife. 2018 Mar 15;7. pii: e31677. doi: 10.7554/eLife.31677.

9.

Oocyte DNA damage quality control requires consecutive interplay of CHK2 and CK1 to activate p63.

Tuppi M, Kehrloesser S, Coutandin DW, Rossi V, Luh LM, Strubel A, Hötte K, Hoffmeister M, Schäfer B, De Oliveira T, Greten F, Stelzer EHK, Knapp S, De Felici M, Behrends C, Klinger FG, Dötsch V.

Nat Struct Mol Biol. 2018 Mar;25(3):261-269. doi: 10.1038/s41594-018-0035-7. Epub 2018 Feb 26.

PMID:
29483652
10.

Non-lethal genotyping of Tribolium castaneum adults using genomic DNA extracted from wing tissue.

Strobl F, Ross JA, Stelzer EHK.

PLoS One. 2017 Aug 11;12(8):e0182564. doi: 10.1371/journal.pone.0182564. eCollection 2017.

11.

Light Sheet-based Fluorescence Microscopy of Living or Fixed and Stained Tribolium castaneum Embryos.

Strobl F, Klees S, Stelzer EHK.

J Vis Exp. 2017 Apr 28;(122). doi: 10.3791/55629.

12.

Endogenous AJAP1 associates with the cytoskeleton and attenuates angiogenesis in endothelial cells.

Hötte K, Smyrek I, Starzinski-Powitz A, Stelzer EHK.

Biol Open. 2017 Jun 15;6(6):723-731. doi: 10.1242/bio.022335.

13.

Improving your four-dimensional image: traveling through a decade of light-sheet-based fluorescence microscopy research.

Strobl F, Schmitz A, Stelzer EHK.

Nat Protoc. 2017 Jun;12(6):1103-1109. doi: 10.1038/nprot.2017.028. Epub 2017 May 4.

PMID:
28471459
14.

csiLSFM combines light-sheet fluorescence microscopy and coherent structured illumination for a lateral resolution below 100 nm.

Chang BJ, Perez Meza VD, Stelzer EHK.

Proc Natl Acad Sci U S A. 2017 May 9;114(19):4869-4874. doi: 10.1073/pnas.1609278114. Epub 2017 Apr 24.

15.

Three-Dimensional Live Imaging of Filamentous Fungi with Light Sheet-Based Fluorescence Microscopy (LSFM).

Pampaloni F, Knuppertz L, Hamann A, Osiewacz HD, Stelzer EHK.

Methods Mol Biol. 2017;1563:19-31. doi: 10.1007/978-1-4939-6810-7_2.

PMID:
28324599
16.

A Novel Cellular Spheroid-Based Autophagy Screen Applying Live Fluorescence Microscopy Identifies Nonactin as a Strong Inducer of Autophagosomal Turnover.

Pampaloni F, Mayer B, Kabat Vel-Job K, Ansari N, Hötte K, Kögel D, Stelzer EHK.

SLAS Discov. 2017 Jun;22(5):558-570. doi: 10.1177/2472555217696798. Epub 2017 Mar 15.

PMID:
28297606
17.

Quantitative three-dimensional evaluation of immunofluorescence staining for large whole mount spheroids with light sheet microscopy.

Smyrek I, Stelzer EH.

Biomed Opt Express. 2017 Jan 3;8(2):484-499. doi: 10.1364/BOE.8.000484. eCollection 2017 Feb 1.

18.

Multiscale image analysis reveals structural heterogeneity of the cell microenvironment in homotypic spheroids.

Schmitz A, Fischer SC, Mattheyer C, Pampaloni F, Stelzer EH.

Sci Rep. 2017 Mar 3;7:43693. doi: 10.1038/srep43693.

19.

Long-term fluorescence live imaging of Tribolium castaneum embryos: principles, resources, scientific challenges and the comparative approach.

Strobl F, Stelzer EH.

Curr Opin Insect Sci. 2016 Dec;18:17-26. doi: 10.1016/j.cois.2016.08.002. Epub 2016 Aug 28. Review.

PMID:
27939706
20.

Alternative exon usage creates novel transcript variants of tumor suppressor SHREW-1 gene with differential tissue expression profile.

Klemmt PA, Resch E, Smyrek I, Engels K, Stelzer EH, Starzinski-Powitz A.

Biol Open. 2016 Nov 15;5(11):1607-1619. doi: 10.1242/bio.019463.

21.

Optimal 2D-SIM reconstruction by two filtering steps with Richardson-Lucy deconvolution.

Perez V, Chang BJ, Stelzer EH.

Sci Rep. 2016 Nov 16;6:37149. doi: 10.1038/srep37149.

22.

Identifying the necrotic zone boundary in tumour spheroids with pair-correlation functions.

Dini S, Binder BJ, Fischer SC, Mattheyer C, Schmitz A, Stelzer EH, Bean NG, Green JE.

J R Soc Interface. 2016 Oct;13(123). pii: 20160649.

23.

Hsp90 Is Involved in the Regulation of Cytosolic Precursor Protein Abundance in Tomato.

Tillmann B, Röth S, Bublak D, Sommer M, Stelzer EH, Scharf KD, Schleiff E.

Mol Plant. 2015 Jul 6;8(7):1128. doi: 10.1016/j.molp.2015.05.011. Epub 2015 Jun 25. No abstract available.

24.

A 3-D cell culture system to study epithelia functions using microcarriers.

Jakob PH, Kehrer J, Flood P, Wiegel C, Haselmann U, Meissner M, Stelzer EH, Reynaud EG.

Cytotechnology. 2016 Oct;68(5):1813-25. doi: 10.1007/s10616-015-9935-0. Epub 2016 Feb 4.

25.

Rules and Self-Organizing Properties of Post-embryonic Plant Organ Cell Division Patterns.

von Wangenheim D, Fangerau J, Schmitz A, Smith RS, Leitte H, Stelzer EH, Maizel A.

Curr Biol. 2016 Feb 22;26(4):439-49. doi: 10.1016/j.cub.2015.12.047. Epub 2016 Jan 28.

26.

Live imaging of Tribolium castaneum embryonic development using light-sheet-based fluorescence microscopy.

Strobl F, Schmitz A, Stelzer EH.

Nat Protoc. 2015 Oct;10(10):1486-507. doi: 10.1038/nprot.2015.093. Epub 2015 Sep 3.

PMID:
26334868
27.

Erratum to: light sheet-based fluorescence microscopy (LSFM) for the quantitative imaging of cells and tissues.

Pampaloni F, Chang BJ, Stelzer EH.

Cell Tissue Res. 2015 Oct;362(1):265. doi: 10.1007/s00441-015-2247-z. Epub 2015 Jul 14. No abstract available.

PMID:
26169303
28.

Robust and automated three-dimensional segmentation of densely packed cell nuclei in different biological specimens with Lines-of-Sight decomposition.

Mathew B, Schmitz A, Muñoz-Descalzo S, Ansari N, Pampaloni F, Stelzer EH, Fischer SC.

BMC Bioinformatics. 2015 Jun 8;16:187. doi: 10.1186/s12859-015-0617-x.

29.

Cytotoxicity and infiltration of human NK cells in in vivo-like tumor spheroids.

Giannattasio A, Weil S, Kloess S, Ansari N, Stelzer EH, Cerwenka A, Steinle A, Koehl U, Koch J.

BMC Cancer. 2015 May 3;15:351. doi: 10.1186/s12885-015-1321-y.

30.

Light sheet-based fluorescence microscopy (LSFM) for the quantitative imaging of cells and tissues.

Pampaloni F, Chang BJ, Stelzer EH.

Cell Tissue Res. 2015 Apr;360(1):129-41. doi: 10.1007/s00441-015-2144-5. Epub 2015 Mar 6. Erratum in: Cell Tissue Res. 2015 Oct;362(1):265.

PMID:
25743693
31.

A Photorhabdus natural product inhibits insect juvenile hormone epoxide hydrolase.

Nollmann FI, Heinrich AK, Brachmann AO, Morisseau C, Mukherjee K, Casanova-Torres ÁM, Strobl F, Kleinhans D, Kinski S, Schultz K, Beeton ML, Kaiser M, Chu YY, Phan Ke L, Thanwisai A, Bozhüyük KA, Chantratita N, Götz F, Waterfield NR, Vilcinskas A, Stelzer EH, Goodrich-Blair H, Hammock BD, Bode HB.

Chembiochem. 2015 Mar 23;16(5):766-71. doi: 10.1002/cbic.201402650. Epub 2015 Feb 25.

32.

Hsp90 is involved in the regulation of cytosolic precursor protein abundance in tomato.

Tillmann B, Röth S, Bublak D, Sommer M, Stelzer EH, Scharf KD, Schleiff E.

Mol Plant. 2015 Feb;8(2):228-41. doi: 10.1016/j.molp.2014.10.005. Epub 2014 Dec 11.

33.

Lateral assembly of N-cadherin drives tissue integrity by stabilizing adherens junctions.

Garg S, Fischer SC, Schuman EM, Stelzer EH.

J R Soc Interface. 2015 Mar 6;12(104):20141055. doi: 10.1098/rsif.2014.1055.

34.

Proper migration and axon outgrowth of zebrafish cranial motoneuron subpopulations require the cell adhesion molecule MDGA2A.

Ingold E, Vom Berg-Maurer CM, Burckhardt CJ, Lehnherr A, Rieder P, Keller PJ, Stelzer EH, Greber UF, Neuhauss SC, Gesemann M.

Biol Open. 2015 Jan 8;4(2):146-54. doi: 10.1242/bio.20148482.

35.

Light-sheet fluorescence microscopy for quantitative biology.

Stelzer EH.

Nat Methods. 2015 Jan;12(1):23-6. doi: 10.1038/nmeth.3219. No abstract available.

PMID:
25549266
36.

Better imaging through chemistry.

Stelzer EH.

Cell. 2014 Dec 4;159(6):1243-6. doi: 10.1016/j.cell.2014.11.032.

37.

Live spheroid formation recorded with light sheet-based fluorescence microscopy.

Pampaloni F, Richa R, Ansari N, Stelzer EH.

Methods Mol Biol. 2015;1251:43-57. doi: 10.1007/978-1-4939-2080-8_3.

PMID:
25391793
38.

Invited review article: Advanced light microscopy for biological space research.

De Vos WH, Beghuin D, Schwarz CJ, Jones DB, van Loon JJ, Bereiter-Hahn J, Stelzer EH.

Rev Sci Instrum. 2014 Oct;85(10):101101. doi: 10.1063/1.4898123. Review.

PMID:
25362364
39.

Hsp90 is involved in the regulation of cytosolic precursor protein abundance in tomato.

Tillmann B, Röth S, Bublak D, Sommer M, Stelzer EH, Scharf KD, Schleiff E.

Mol Plant. 2014 Oct 20. pii: ssu113. [Epub ahead of print]

PMID:
25336566
40.

Trans-Golgi network localized small GTPase RabA1d is involved in cell plate formation and oscillatory root hair growth.

Berson T, von Wangenheim D, Takáč T, Šamajová O, Rosero A, Ovečka M, Komis G, Stelzer EH, Šamaj J.

BMC Plant Biol. 2014 Sep 27;14:252. doi: 10.1186/s12870-014-0252-0.

41.

Tissue-culture light sheet fluorescence microscopy (TC-LSFM) allows long-term imaging of three-dimensional cell cultures under controlled conditions.

Pampaloni F, Berge U, Marmaras A, Horvath P, Kroschewski R, Stelzer EH.

Integr Biol (Camb). 2014 Oct;6(10):988-98. doi: 10.1039/c4ib00121d. Epub 2014 Sep 3.

PMID:
25183478
42.

Quantifying the autophagy-triggering effects of drugs in cell spheroids with live fluorescence microscopy.

Ansari N, Hardung S, Hötte K, Rakel S, Antonietti P, Kögel D, Stelzer EH, Pampaloni F.

Methods Mol Biol. 2014;1165:19-29. doi: 10.1007/978-1-4939-0856-1_3.

PMID:
24839016
43.

Non-invasive long-term fluorescence live imaging of Tribolium castaneum embryos.

Strobl F, Stelzer EH.

Development. 2014 Jun;141(11):2331-8. doi: 10.1242/dev.108795. Epub 2014 May 6. Erratum in: Development. 2014 Jun;141(11):2361.

44.

Live imaging and quantitative analysis of gastrulation in mouse embryos using light-sheet microscopy and 3D tracking tools.

Ichikawa T, Nakazato K, Keller PJ, Kajiura-Kobayashi H, Stelzer EH, Mochizuki A, Nonaka S.

Nat Protoc. 2014 Mar;9(3):575-85. doi: 10.1038/nprot.2014.035. Epub 2014 Feb 13. Erratum in: Nat Protoc. 2014 Oct;9(10):2513.

PMID:
24525751
45.

3D high-content screening for the identification of compounds that target cells in dormant tumor spheroid regions.

Wenzel C, Riefke B, Gründemann S, Krebs A, Christian S, Prinz F, Osterland M, Golfier S, Räse S, Ansari N, Esner M, Bickle M, Pampaloni F, Mattheyer C, Stelzer EH, Parczyk K, Prechtl S, Steigemann P.

Exp Cell Res. 2014 Apr 15;323(1):131-43. doi: 10.1016/j.yexcr.2014.01.017. Epub 2014 Jan 27.

46.

A spatial accommodation by neighboring cells is required for organ initiation in Arabidopsis.

Vermeer JE, von Wangenheim D, Barberon M, Lee Y, Stelzer EH, Maizel A, Geldner N.

Science. 2014 Jan 10;343(6167):178-83. doi: 10.1126/science.1245871.

PMID:
24408432
47.

Imaging MDCK cysts with a single (selective) plane illumination microscope.

Swoger J, Pampaloni F, Stelzer EH.

Cold Spring Harb Protoc. 2014 Jan 1;2014(1):114-8. doi: 10.1101/pdb.prot080184.

PMID:
24371325
48.

Imaging cellular spheroids with a single (selective) plane illumination microscope.

Swoger J, Pampaloni F, Stelzer EH.

Cold Spring Harb Protoc. 2014 Jan 1;2014(1):106-13. doi: 10.1101/pdb.prot080176.

PMID:
24371324
49.

Light-sheet-based fluorescence microscopy for three-dimensional imaging of biological samples.

Swoger J, Pampaloni F, Stelzer EH.

Cold Spring Harb Protoc. 2014 Jan 1;2014(1):1-8. doi: 10.1101/pdb.top080168.

PMID:
24371323
50.

Role of N-cadherin cis and trans interfaces in the dynamics of adherens junctions in living cells.

Bunse S, Garg S, Junek S, Vogel D, Ansari N, Stelzer EH, Schuman E.

PLoS One. 2013 Dec 2;8(12):e81517. doi: 10.1371/journal.pone.0081517. eCollection 2013.

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