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Statin-induced LDL cholesterol response and type 2 diabetes: a bidirectional two-sample Mendelian randomization study.

Smit RAJ, Trompet S, Leong A, Goodarzi MO, Postmus I, Warren H, Theusch E, Barnes MR, Arsenault BJ, Li X, Feng Q, Chasman DI, Cupples LA, Hitman GA, Krauss RM, Psaty BM, Rotter JI, Cessie SL, Stein CM, Jukema JW; GIST consortium.

Pharmacogenomics J. 2019 Dec 5. doi: 10.1038/s41397-019-0125-x. [Epub ahead of print]


Importance of study design and phenotype definition in ongoing studies of resistance to latent M. tuberculosis infection.

Stein CM, Mayanja-Kizza H, Hawn TR, Boom WH.

J Infect Dis. 2019 Oct 30. pii: jiz539. doi: 10.1093/infdis/jiz539. [Epub ahead of print] No abstract available.


Differential Long-Term Outcomes for Individuals With Histories of Preschool Speech Sound Disorders.

Lewis BA, Freebairn L, Tag J, Igo RP Jr, Ciesla A, Iyengar SK, Stein CM, Taylor HG.

Am J Speech Lang Pathol. 2019 Nov 19;28(4):1582-1596. doi: 10.1044/2019_AJSLP-18-0247. Epub 2019 Oct 10.


A Genetic Approach to the Association Between PCSK9 and Sepsis.

Feng Q, Wei WQ, Chaugai S, Carranza Leon BG, Kawai V, Carranza Leon DA, Jiang L, Zhong X, Liu G, Ihegword A, Shaffer CM, Linton MF, Chung CP, Stein CM.

JAMA Netw Open. 2019 Sep 4;2(9):e1911130. doi: 10.1001/jamanetworkopen.2019.11130.


Genetic variability and consequence of Mycobacterium tuberculosis lineage 3 in Kampala-Uganda.

Wampande EM, Naniima P, Mupere E, Kateete DP, Malone LL, Stein CM, Mayanja-Kizza H, Gagneux S, Boom WH, Joloba ML.

PLoS One. 2019 Sep 9;14(9):e0221644. doi: 10.1371/journal.pone.0221644. eCollection 2019.


Individual short-acting opioids and the risk of opioid-related adverse events in adolescents.

Chung CP, Callahan ST, Cooper WO, Dupont WD, Murray KT, Franklin AD, Hall K, Dudley JA, Stein CM, Ray WA.

Pharmacoepidemiol Drug Saf. 2019 Nov;28(11):1448-1456. doi: 10.1002/pds.4872. Epub 2019 Aug 16.


Sagittal Plane Considerations During Long Cephalomedullary Nailing: Optimal Distal Positioning and the Role of Intraoperative Nail Bending.

Georgiadis GM, Stein CM, Bair JM, Tank JC, Georgiadis AG, Redfern RE.

J Orthop Trauma. 2019 Nov;33(11):553-558. doi: 10.1097/BOT.0000000000001577.


Vascular α1-adrenergic sensitivity is enhanced in chronic kidney disease.

Sprick JD, Morison DL, Stein CM, Li Y, Paranjape S, Fonkoue IT, DaCosta DR, Park J.

Am J Physiol Regul Integr Comp Physiol. 2019 Sep 1;317(3):R485-R490. doi: 10.1152/ajpregu.00090.2019. Epub 2019 Jul 17.


Publisher Correction: IFN-γ-independent immune markers of Mycobacterium tuberculosis exposure.

Lu LL, Smith MT, Yu KKQ, Luedemann C, Suscovich TJ, Grace PS, Cain A, Yu WH, McKitrick TR, Lauffenburger D, Cummings RD, Mayanja-Kizza H, Hawn TR, Boom WH, Stein CM, Fortune SM, Seshadri C, Alter G.

Nat Med. 2019 Jul;25(7):1175. doi: 10.1038/s41591-019-0519-y.


Increased blood pressure visit-to-visit variability in patients with systemic lupus erythematosus: association with inflammation and comorbidity burden.

Reese T, Dickson AL, Shuey MM, Gandelman JS, Barnado A, Barker KA, Neal JE, Khan OA, Dupont WD, Stein CM, Chung CP.

Lupus. 2019 Jul;28(8):954-960. doi: 10.1177/0961203319856988. Epub 2019 Jun 20.


Variants in BMI-Associated Genes and Adrenergic Genes are not Associated with Gestational Weight Trajectory.

Kawai VK, Nwosu SK, Kurnik D, Harrell FE, Stein CM.

Obesity (Silver Spring). 2019 Jul;27(7):1184-1189. doi: 10.1002/oby.22505. Epub 2019 May 22.


IFN-γ-independent immune markers of Mycobacterium tuberculosis exposure.

Lu LL, Smith MT, Yu KKQ, Luedemann C, Suscovich TJ, Grace PS, Cain A, Yu WH, McKitrick TR, Lauffenburger D, Cummings RD, Mayanja-Kizza H, Hawn TR, Boom WH, Stein CM, Fortune SM, Seshadri C, Alter G.

Nat Med. 2019 Jun;25(6):977-987. doi: 10.1038/s41591-019-0441-3. Epub 2019 May 20. Erratum in: Nat Med. 2019 Jun 20;:.


Development and Validation of a MicroRNA Panel to Differentiate Between Patients with Rheumatoid Arthritis or Systemic Lupus Erythematosus and Controls.

Ormseth MJ, Solus JF, Sheng Q, Ye F, Wu Q, Guo Y, Oeser AM, Allen RM, Vickers KC, Stein CM.

J Rheumatol. 2019 May 15. pii: jrheum.181029. doi: 10.3899/jrheum.181029. [Epub ahead of print]


Exploring the Lipid Paradox Theory in Rheumatoid Arthritis: Associations of Low Circulating Low-Density Lipoprotein Concentration With Subclinical Coronary Atherosclerosis.

Giles JT, Wasko MCM, Chung CP, Szklo M, Blumenthal RS, Kao A, Bokhari S, Zartoshti A, Stein CM, Bathon JM.

Arthritis Rheumatol. 2019 Sep;71(9):1426-1436. doi: 10.1002/art.40889. Epub 2019 Aug 1.


Increased Incidence of Resistant Hypertension in Patients with Systemic Lupus Erythematosus: A Retrospective Cohort Study.

Gandelman JS, Khan OA, Shuey MM, Neal JE, McNeer E, Dickson A, Barnado A, Wang L, Anandi P, Dupont WD, Stein CM, Chung CP.

Arthritis Care Res (Hoboken). 2019 Mar 15. doi: 10.1002/acr.23880. [Epub ahead of print]


Correction: Experiences and perspectives on the return of secondary findings among genetic epidemiologists.

Stein CM, Ponsaran R, Trapl ES, Goldenberg AJ.

Genet Med. 2019 Jun;21(6):1463. doi: 10.1038/s41436-019-0462-9.


A phenome-wide association study to discover pleiotropic effects of PCSK9, APOB, and LDLR.

Safarova MS, Satterfield BA, Fan X, Austin EE, Ye Z, Bastarache L, Zheng N, Ritchie MD, Borthwick KM, Williams MS, Larson EB, Scrol A, Jarvik GP, Crosslin DR, Leppig K, Rasmussen-Torvik LJ, Pendergrass SA, Sturm AC, Namjou B, Shah AS, Carroll RJ, Chung WK, Wei WQ, Feng Q, Stein CM, Roden DM, Manolio TA, Schaid DJ, Denny JC, Hebbring SJ, de Andrade M, Kullo IJ.

NPJ Genom Med. 2019 Feb 11;4:3. doi: 10.1038/s41525-019-0078-7. eCollection 2019.


Association Between Low-Density Lipoprotein Cholesterol Levels and Risk for Sepsis Among Patients Admitted to the Hospital With Infection.

Feng Q, Wei WQ, Chaugai S, Leon BGC, Mosley JD, Leon DAC, Jiang L, Ihegword A, Shaffer CM, Linton MF, Chung CP, Stein CM.

JAMA Netw Open. 2019 Jan 4;2(1):e187223. doi: 10.1001/jamanetworkopen.2018.7223.


Heritability and longitudinal outcomes of spelling skills in individuals with histories of early speech and language disorders.

Lewis BA, Freebairn L, Tag J, Benchek P, Morris NJ, Iyengar SK, Taylor HG, Stein CM.

Learn Individ Differ. 2018 Jul;65:1-11. doi: 10.1016/j.lindif.2018.05.001. Epub 2018 May 26.


Association of Antipsychotic Treatment With Risk of Unexpected Death Among Children and Youths.

Ray WA, Stein CM, Murray KT, Fuchs DC, Patrick SW, Daugherty J, Hall K, Cooper WO.

JAMA Psychiatry. 2019 Feb 1;76(2):162-171. doi: 10.1001/jamapsychiatry.2018.3421.


Association of Oral Anticoagulants and Proton Pump Inhibitor Cotherapy With Hospitalization for Upper Gastrointestinal Tract Bleeding.

Ray WA, Chung CP, Murray KT, Smalley WE, Daugherty JR, Dupont WD, Stein CM.

JAMA. 2018 Dec 4;320(21):2221-2230. doi: 10.1001/jama.2018.17242.


Experiences and perspectives on the return of secondary findings among genetic epidemiologists.

Stein CM, Ponsaran R, Trapl ES, Goldenberg AJ.

Genet Med. 2019 Jul;21(7):1541-1547. doi: 10.1038/s41436-018-0369-x. Epub 2018 Nov 23. Erratum in: Genet Med. 2019 Feb 22;:.


Clinical Pharmacogenetics Implementation Consortium Guideline for Thiopurine Dosing Based on TPMT and NUDT15 Genotypes: 2018 Update.

Relling MV, Schwab M, Whirl-Carrillo M, Suarez-Kurtz G, Pui CH, Stein CM, Moyer AM, Evans WE, Klein TE, Antillon-Klussmann FG, Caudle KE, Kato M, Yeoh AEJ, Schmiegelow K, Yang JJ.

Clin Pharmacol Ther. 2019 May;105(5):1095-1105. doi: 10.1002/cpt.1304. Epub 2019 Jan 20.


Long-acting Opioid Use and the Risk of Serious Infections: A Retrospective Cohort Study.

Wiese AD, Griffin MR, Schaffner W, Stein CM, Greevy RA, Mitchel EF, Grijalva CG.

Clin Infect Dis. 2019 May 17;68(11):1862-1869. doi: 10.1093/cid/ciy809.


Co-Prescription of Strong CYP1A2 Inhibitors and the Risk of Tizanidine-Associated Hypotension: A Retrospective Cohort Study.

Chaugai S, Dickson AL, Shuey MM, Feng Q, Barker KA, Wei WQ, Luther JM, Stein CM, Chung CP.

Clin Pharmacol Ther. 2019 Mar;105(3):703-709. doi: 10.1002/cpt.1233. Epub 2018 Oct 18.


Opioid Analgesic Use and Risk for Invasive Pneumococcal Diseases.

Wiese AD, Griffin MR, Schaffner W, Stein CM, Grijalva CG.

Ann Intern Med. 2018 Sep 4;169(5):355. doi: 10.7326/L18-0295. No abstract available.


A study paradigm integrating prospective epidemiologic cohorts and electronic health records to identify disease biomarkers.

Mosley JD, Feng Q, Wells QS, Van Driest SL, Shaffer CM, Edwards TL, Bastarache L, Wei WQ, Davis LK, McCarty CA, Thompson W, Chute CG, Jarvik GP, Gordon AS, Palmer MR, Crosslin DR, Larson EB, Carrell DS, Kullo IJ, Pacheco JA, Peissig PL, Brilliant MH, Linneman JG, Namjou B, Williams MS, Ritchie MD, Borthwick KM, Verma SS, Karnes JH, Weiss ST, Wang TJ, Stein CM, Denny JC, Roden DM.

Nat Commun. 2018 Aug 30;9(1):3522. doi: 10.1038/s41467-018-05624-4.


Long-term Stability of Resistance to Latent Mycobacterium tuberculosis Infection in Highly Exposed Tuberculosis Household Contacts in Kampala, Uganda.

Stein CM, Nsereko M, Malone LL, Okware B, Kisingo H, Nalukwago S, Chervenak K, Mayanja-Kizza H, Hawn TR, Boom WH.

Clin Infect Dis. 2019 May 2;68(10):1705-1712. doi: 10.1093/cid/ciy751.


Relationship between very low low-density lipoprotein cholesterol concentrations not due to statin therapy and risk of type 2 diabetes: A US-based cross-sectional observational study using electronic health records.

Feng Q, Wei WQ, Chung CP, Levinson RT, Sundermann AC, Mosley JD, Bastarache L, Ferguson JF, Cox NJ, Roden DM, Denny JC, Linton MF, Edwards DRV, Stein CM.

PLoS Med. 2018 Aug 28;15(8):e1002642. doi: 10.1371/journal.pmed.1002642. eCollection 2018 Aug.


Fine-mapping analysis of a chromosome 2 region linked to resistance to Mycobacterium tuberculosis infection in Uganda reveals potential regulatory variants.

Igo RP Jr, Hall NB, Malone LL, Hall JB, Truitt B, Qiu F, Tao L, Mupere E, Schnell A, Hawn TR, Bush WS, Joloba M, Boom WH, Stein CM.

Genes Immun. 2019 Jul;20(6):473-483. doi: 10.1038/s41435-018-0040-1. Epub 2018 Aug 13.


Outpatient Opioid Prescriptions for Children and Opioid-Related Adverse Events.

Chung CP, Callahan ST, Cooper WO, Dupont WD, Murray KT, Franklin AD, Hall K, Dudley JA, Stein CM, Ray WA.

Pediatrics. 2018 Aug;142(2). pii: e20172156. doi: 10.1542/peds.2017-2156. Epub 2018 Jul 16.


Comparative out-of-hospital mortality of long-acting opioids prescribed for non-cancer pain: A retrospective cohort study.

Chung CP, Dupont WD, Murray KT, Hall K, Stein CM, Ray WA.

Pharmacoepidemiol Drug Saf. 2019 Jan;28(1):48-53. doi: 10.1002/pds.4619. Epub 2018 Jul 12.


Impact of geographic distance on appraisal delay for active TB treatment seeking in Uganda: a network analysis of the Kawempe Community Health Cohort Study.

Fluegge K, Malone LL, Nsereko M, Okware B, Wejse C, Kisingo H, Mupere E, Boom WH, Stein CM.

BMC Public Health. 2018 Jun 26;18(1):798. doi: 10.1186/s12889-018-5648-6.


Validation of discharge diagnosis codes to identify serious infections among middle age and older adults.

Wiese AD, Griffin MR, Stein CM, Schaffner W, Greevy RA, Mitchel EF Jr, Grijalva CG.

BMJ Open. 2018 Jun 19;8(6):e020857. doi: 10.1136/bmjopen-2017-020857.


Immunological mechanisms of human resistance to persistent Mycobacterium tuberculosis infection.

Simmons JD, Stein CM, Seshadri C, Campo M, Alter G, Fortune S, Schurr E, Wallis RS, Churchyard G, Mayanja-Kizza H, Boom WH, Hawn TR.

Nat Rev Immunol. 2018 Sep;18(9):575-589. doi: 10.1038/s41577-018-0025-3. Review.


Novel polymorphisms in TICAM2 and NOD1 associated with tuberculosis progression phenotypes in Ethiopian populations.

Mekonnen E, Bekele E, Stein CM.

Glob Health Epidemiol Genom. 2018 Jan 23;3:e1. doi: 10.1017/gheg.2017.17. eCollection 2018.


AmpliSeq transcriptome analysis of human alveolar and monocyte-derived macrophages over time in response to Mycobacterium tuberculosis infection.

Papp AC, Azad AK, Pietrzak M, Williams A, Handelman SK, Igo RP Jr, Stein CM, Hartmann K, Schlesinger LS, Sadee W.

PLoS One. 2018 May 30;13(5):e0198221. doi: 10.1371/journal.pone.0198221. eCollection 2018.


Exercise is Associated With Increased Small HDL Particle Concentration and Decreased Vascular Stiffness in Rheumatoid Arthritis.

Byram KW, Oeser AM, Linton MF, Fazio S, Stein CM, Ormseth MJ.

J Clin Rheumatol. 2018 Dec;24(8):417-421. doi: 10.1097/RHU.0000000000000809.


Genomics of human pulmonary tuberculosis: from genes to pathways.

Stein CM, Sausville L, Wejse C, Sobota RS, Zetola NM, Hill PC, Boom WH, Scott WK, Sirugo G, Williams SM.

Curr Genet Med Rep. 2017 Dec;5(4):149-166. doi: 10.1007/s40142-017-0130-9. Epub 2017 Oct 12.


LPA Variants Are Associated With Residual Cardiovascular Risk in Patients Receiving Statins.

Wei WQ, Li X, Feng Q, Kubo M, Kullo IJ, Peissig PL, Karlson EW, Jarvik GP, Lee MTM, Shang N, Larson EA, Edwards T, Shaffer CM, Mosley JD, Maeda S, Horikoshi M, Ritchie M, Williams MS, Larson EB, Crosslin DR, Bland ST, Pacheco JA, Rasmussen-Torvik LJ, Cronkite D, Hripcsak G, Cox NJ, Wilke RA, Stein CM, Rotter JI, Momozawa Y, Roden DM, Krauss RM, Denny JC.

Circulation. 2018 Oct 23;138(17):1839-1849. doi: 10.1161/CIRCULATIONAHA.117.031356.


Absence of Fibrosis and Inflammation by Cardiac Magnetic Resonance Imaging in Rheumatoid Arthritis Patients with Low to Moderate Disease Activity.

Bradham W, Ormseth MJ, Elumogo C, Palanisamy S, Liu CY, Lawson MA, Soslow JH, Kawel-Boehm N, Bluemke DA, Stein CM.

J Rheumatol. 2018 Aug;45(8):1078-1084. doi: 10.3899/jrheum.170770. Epub 2018 Apr 15.


Opioid Analgesic Use and Risk for Invasive Pneumococcal Diseases: A Nested Case-Control Study.

Wiese AD, Griffin MR, Schaffner W, Stein CM, Greevy RA, Mitchel EF Jr, Grijalva CG.

Ann Intern Med. 2018 Mar 20;168(6):396-404. doi: 10.7326/M17-1907. Epub 2018 Feb 13.


Resistance and Susceptibility to Mycobacterium tuberculosis Infection and Disease in Tuberculosis Households in Kampala, Uganda.

Stein CM, Zalwango S, Malone LL, Thiel B, Mupere E, Nsereko M, Okware B, Kisingo H, Lancioni CL, Bark CM, Whalen CC, Joloba ML, Boom WH, Mayanja-Kizza H.

Am J Epidemiol. 2018 Jul 1;187(7):1477-1489. doi: 10.1093/aje/kwx380.


Effectiveness of WHO's pragmatic screening algorithm for child contacts of tuberculosis cases in resource-constrained settings: a prospective cohort study in Uganda.

Martinez L, Shen Y, Handel A, Chakraburty S, Stein CM, Malone LL, Boom WH, Quinn FD, Joloba ML, Whalen CC, Zalwango S.

Lancet Respir Med. 2018 Apr;6(4):276-286. doi: 10.1016/S2213-2600(17)30497-6. Epub 2017 Dec 19.


A Prospective Validation of a Clinical Algorithm to Detect Tuberculosis in Child Contacts.

Martinez L, Handel A, Shen Y, Chakraburty S, Quinn FD, Stein CM, Malone LL, Zalwango S, Whalen CC.

Am J Respir Crit Care Med. 2018 May 1;197(9):1214-1216. doi: 10.1164/rccm.201706-1210LE. No abstract available.


Mendelian Randomization.

Grover S, Del Greco M F, Stein CM, Ziegler A.

Methods Mol Biol. 2017;1666:581-628. doi: 10.1007/978-1-4939-7274-6_29.


Structural Equation Modeling.

Stein CM, Morris NJ, Hall NB, Nock NL.

Methods Mol Biol. 2017;1666:557-580. doi: 10.1007/978-1-4939-7274-6_28.


Model-Free Linkage Analysis of a Quantitative Trait.

Morris NJ, Stein CM.

Methods Mol Biol. 2017;1666:327-342. doi: 10.1007/978-1-4939-7274-6_16.


Variation in the α2A-adrenergic receptor gene and risk of gestational diabetes.

Kawai VK, Levinson RT, Adefurin A, Kurnik D, Collier SP, Conway D, Stein CM.

Pharmacogenomics. 2017 Oct;18(15):1381-1386. doi: 10.2217/pgs-2017-0079. Epub 2017 Oct 4.


Identification of Host Proteins Predictive of Early Stage Mycobacterium tuberculosis Infection.

Bark CM, Manceur AM, Malone LL, Nsereko M, Okware B, Mayanja HK, Joloba ML, Rajotte I, Mentinova M, Kay P, Lo S, Tremblay P, Stein CM, Boom WH, Paramithiotis E.

EBioMedicine. 2017 Jul;21:150-157. doi: 10.1016/j.ebiom.2017.06.019. Epub 2017 Jun 20.

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