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Items: 39

1.

Microfluidic Chips for Life Sciences-A Comparison of Low Entry Manufacturing Technologies.

Grösche M, Zoheir AE, Stegmaier J, Mikut R, Mager D, Korvink JG, Rabe KS, Niemeyer CM.

Small. 2019 Aug;15(35):e1901956. doi: 10.1002/smll.201901956. Epub 2019 Jul 15.

PMID:
31305015
2.

The HMG box transcription factors Sox1a and Sox1b specify a new class of glycinergic interneuron in the spinal cord of zebrafish embryos.

Gerber V, Yang L, Takamiya M, Ribes V, Gourain V, Peravali R, Stegmaier J, Mikut R, Reischl M, Ferg M, Rastegar S, Strähle U.

Development. 2019 Feb 20;146(4). pii: dev172510. doi: 10.1242/dev.172510.

3.

Wnt/PCP controls spreading of Wnt/β-catenin signals by cytonemes in vertebrates.

Mattes B, Dang Y, Greicius G, Kaufmann LT, Prunsche B, Rosenbauer J, Stegmaier J, Mikut R, Özbek S, Nienhaus GU, Schug A, Virshup DM, Scholpp S.

Elife. 2018 Jul 31;7. pii: e36953. doi: 10.7554/eLife.36953.

4.

Third-generation in situ hybridization chain reaction: multiplexed, quantitative, sensitive, versatile, robust.

Choi HMT, Schwarzkopf M, Fornace ME, Acharya A, Artavanis G, Stegmaier J, Cunha A, Pierce NA.

Development. 2018 Jun 26;145(12). pii: dev165753. doi: 10.1242/dev.165753.

5.

EmbryoMiner: A new framework for interactive knowledge discovery in large-scale cell tracking data of developing embryos.

Schott B, Traub M, Schlagenhauf C, Takamiya M, Antritter T, Bartschat A, Löffler K, Blessing D, Otte JC, Kobitski AY, Nienhaus GU, Strähle U, Mikut R, Stegmaier J.

PLoS Comput Biol. 2018 Apr 19;14(4):e1006128. doi: 10.1371/journal.pcbi.1006128. eCollection 2018 Apr.

6.

Correction: Fuzzy-based propagation of prior knowledge to improve large-scale image analysis pipelines.

Stegmaier J, Mikut R.

PLoS One. 2018 Mar 29;13(3):e0195394. doi: 10.1371/journal.pone.0195394. eCollection 2018.

7.

Zebrafish: A Pharmacogenetic Model for Anesthesia.

Bedell V, Buglo E, Marcato D, Pylatiuk C, Mikut R, Stegmaier J, Scudder W, Wray M, Züchner S, Strähle U, Peravali R, Dallman JE.

Methods Enzymol. 2018;602:189-209. doi: 10.1016/bs.mie.2018.02.004. Epub 2018 Mar 15.

PMID:
29588029
8.

Fuzzy-based propagation of prior knowledge to improve large-scale image analysis pipelines.

Stegmaier J, Mikut R.

PLoS One. 2017 Nov 2;12(11):e0187535. doi: 10.1371/journal.pone.0187535. eCollection 2017. Erratum in: PLoS One. 2018 Mar 29;13(3):e0195394.

9.

An objective comparison of cell-tracking algorithms.

Ulman V, Maška M, Magnusson KEG, Ronneberger O, Haubold C, Harder N, Matula P, Matula P, Svoboda D, Radojevic M, Smal I, Rohr K, Jaldén J, Blau HM, Dzyubachyk O, Lelieveldt B, Xiao P, Li Y, Cho SY, Dufour AC, Olivo-Marin JC, Reyes-Aldasoro CC, Solis-Lemus JA, Bensch R, Brox T, Stegmaier J, Mikut R, Wolf S, Hamprecht FA, Esteves T, Quelhas P, Demirel Ö, Malmström L, Jug F, Tomancak P, Meijering E, Muñoz-Barrutia A, Kozubek M, Ortiz-de-Solorzano C.

Nat Methods. 2017 Dec;14(12):1141-1152. doi: 10.1038/nmeth.4473. Epub 2017 Oct 30.

10.

Tracking of Indels by DEcomposition is a Simple and Effective Method to Assess Efficiency of Guide RNAs in Zebrafish.

Etard C, Joshi S, Stegmaier J, Mikut R, Strähle U.

Zebrafish. 2017 Dec;14(6):586-588. doi: 10.1089/zeb.2017.1454. Epub 2017 Aug 2.

PMID:
28767326
11.

Zebrafish biosensor for toxicant induced muscle hyperactivity.

Shahid M, Takamiya M, Stegmaier J, Middel V, Gradl M, Klüver N, Mikut R, Dickmeis T, Scholz S, Rastegar S, Yang L, Strähle U.

Sci Rep. 2016 Mar 31;6:23768. doi: 10.1038/srep23768.

12.

Real-Time Three-Dimensional Cell Segmentation in Large-Scale Microscopy Data of Developing Embryos.

Stegmaier J, Amat F, Lemon WC, McDole K, Wan Y, Teodoro G, Mikut R, Keller PJ.

Dev Cell. 2016 Jan 25;36(2):225-40. doi: 10.1016/j.devcel.2015.12.028.

13.

XPIWIT--an XML pipeline wrapper for the Insight Toolkit.

Bartschat A, Hübner E, Reischl M, Mikut R, Stegmaier J.

Bioinformatics. 2016 Jan 15;32(2):315-7. doi: 10.1093/bioinformatics/btv559. Epub 2015 Sep 28.

PMID:
26415725
14.

An ensemble-averaged, cell density-based digital model of zebrafish embryo development derived from light-sheet microscopy data with single-cell resolution.

Kobitski AY, Otte JC, Takamiya M, Schäfer B, Mertes J, Stegmaier J, Rastegar S, Rindone F, Hartmann V, Stotzka R, García A, van Wezel J, Mikut R, Strähle U, Nienhaus GU.

Sci Rep. 2015 Feb 25;5:8601. doi: 10.1038/srep08601.

15.

Impact of STAT/SOCS mRNA expression levels after major injury.

Brumann M, Matz M, Kusmenkov T, Stegmaier J, Biberthaler P, Kanz KG, Mutschler W, Bogner V.

Mediators Inflamm. 2014;2014:749175. doi: 10.1155/2014/749175. Epub 2014 Feb 6.

16.

Fast segmentation of stained nuclei in terabyte-scale, time resolved 3D microscopy image stacks.

Stegmaier J, Otte JC, Kobitski A, Bartschat A, Garcia A, Nienhaus GU, Strähle U, Mikut R.

PLoS One. 2014 Feb 27;9(2):e90036. doi: 10.1371/journal.pone.0090036. eCollection 2014.

17.

Virtual pharmaceutical companies: collaborating flexibly in pharmaceutical development.

Forster SP, Stegmaier J, Spycher R, Seeger S.

Drug Discov Today. 2014 Mar;19(3):348-55. doi: 10.1016/j.drudis.2013.11.015. Epub 2013 Nov 26. Review.

18.

Automated prior knowledge-based quantification of neuronal patterns in the spinal cord of zebrafish.

Stegmaier J, Shahid M, Takamiya M, Yang L, Rastegar S, Reischl M, Strähle U, Mikut R.

Bioinformatics. 2014 Mar 1;30(5):726-33. doi: 10.1093/bioinformatics/btt600. Epub 2013 Oct 17.

PMID:
24135262
19.

Robust optimal design of experiments for model discrimination using an interactive software tool.

Stegmaier J, Skanda D, Lebiedz D.

PLoS One. 2013;8(2):e55723. doi: 10.1371/journal.pone.0055723. Epub 2013 Feb 4.

20.

The sequential trauma score - a new instrument for the sequential mortality prediction in major trauma.

Huber-Wagner S, Stegmaier J, Mathonia P, Paffrath T, Euler E, Mutschler W, Kanz KG, Lefering R; Working Group on Polytrauma (NIS) of the German Trauma Society (DGU).

Eur J Med Res. 2010 May 18;15(5):185-95.

21.

Duration and predictors of emergency surgical operations--basis for medical management of mass casualty incidents.

Huber-Wagner S, Lefering R, Kay MV, Stegmaier J, Khalil PN, Paul AO, Biberthaler P, Mutschler W, Kanz KG; Working Group on Polytrauma (NIS) of the German Trauma Soceity (DGU).

Eur J Med Res. 2009;14:532-40.

22.
23.

Dynamics of neutrophilic NF-kB translocation in relation to IL-8 mRNA expression after major trauma.

Stegmaier JC, Kirchhoff C, Bogner V, Matz M, Kanz KG, Mutschler W, Biberthaler P.

Inflamm Res. 2008 Nov;57(11):547-54. doi: 10.1007/s00011-008-7207-6.

PMID:
19109749
24.

Cerebrospinal IL-10 concentration is elevated in non-survivors as compared to survivors after severe traumatic brain injury.

Kirchhoff C, Buhmann S, Bogner V, Stegmaier J, Leidel BA, Braunstein V, Mutschler W, Biberthaler P.

Eur J Med Res. 2008 Oct 27;13(10):464-8.

PMID:
19008173
25.

[Analysis of failure modes in multislice computed tomography during primary trauma survey].

Siebers C, Stegmaier J, Kirchhoff C, Wirth S, Körner M, Kay MV, Pfeifer KJ, Kanz KG.

Rofo. 2008 Aug;180(8):733-9. doi: 10.1055/s-2008-1027561. Epub 2008 Jul 3. German.

PMID:
18600603
26.

Celiac dissection after blunt abdominal trauma complicated by acute hepatic failure: case report and review of literature.

Kirchhoff C, Stegmaier J, Krotz M, Muetzel Rauch E, Mutschler W, Kanz KG, Heindl B.

J Vasc Surg. 2007 Sep;46(3):576-80.

27.

Snapshot assessment of RNA-expression in severely burned patients using the PAXgene Blood RNA system: a pilot study.

Landes J, Langer S, Kirchhoff C, Schuetz C, Joneidi-Jafari H, Stegmaier J, Mutschler W, Biberthaler P.

Burns. 2008 Mar;34(2):197-204. Epub 2007 Jul 17.

PMID:
17644265
28.

Trauma surgeons' attitude towards family presence during trauma resuscitation: a nationwide survey.

Kirchhoff C, Stegmaier J, Buhmann S, Leidel BA, Biberthaler P, Mutschler W, Kanz KG.

Resuscitation. 2007 Nov;75(2):267-75. Epub 2007 Jun 5.

PMID:
17553609
29.

[Diagnosis and treatment of paronychia].

Kirchhoff C, Stegmaier J, Volkering C, Hellers J, Mutschler W, Kanz KG.

MMW Fortschr Med. 2007 Mar 8;149(10):34-5. Review. German.

PMID:
17408045
30.

Gene expression profiles are influenced by ISS, MOF, and clinical outcome in multiple injured patients: a genome-wide comparative analysis.

Bogner V, Kirchhoff C, Baker HV, Stegmaier JC, Moldawer LL, Mutschler W, Biberthaler P.

Langenbecks Arch Surg. 2007 May;392(3):255-65. Epub 2007 Apr 3.

PMID:
17404753
31.

Analysis of NF-kappaB nuclear translocation in PMN-neutrophils of major trauma patients in the early post-traumatic period: a pilot study.

Stegmaier J, Kirchhoff C, Kanz KG, Mayer V, Landes J, Euler E, Mutschler W, Biberthaler P.

World J Surg. 2006 Dec;30(12):2142-51.

PMID:
17102914
32.

[The presence of family members in the trauma room].

Kirchhoff C, Stegmaier J, Buhmann S, Botzlar A, Biberthaler P, Kneissl S, Mutschler W, Kanz KG.

Unfallchirurg. 2006 Aug;109(8):673-7. German.

PMID:
16841229
33.

Intrathecal and systemic concentration of NT-proBNP in patients with severe traumatic brain injury.

Kirchhoff C, Stegmaier J, Bogner V, Buhmann S, Mussack T, Kreimeier U, Mutschler W, Biberthaler P.

J Neurotrauma. 2006 Jun;23(6):943-9.

PMID:
16774478
34.

[Tension pneumopericardium--a rare complication in multiply injured patients].

Stegmaier J, Kirchhoff C, Biberthaler P, Buhmann S, Körner M, Ladurner R, Kanz KG, Mutschler W.

Unfallchirurg. 2006 Mar;109(3):245-50. Review. German.

PMID:
16270190
35.

Initial posttraumatic translocation of NF-kappaB and TNF-alpha mRNA expression in peripheral blood monocytes of trauma patients with multiple injuries: a pilot study.

Biberthaler P, Stegmaier J, Mayer V, Kirchhoff C, Neth P, Mussack T, Mutschler W, Jochum M.

Shock. 2004 Dec;22(6):527-32.

PMID:
15545823
36.

Persistent pulmonary consolidation treated with intrapulmonary percussive ventilation: a preliminary report.

Birnkrant DJ, Pope JF, Lewarski J, Stegmaier J, Besunder JB.

Pediatr Pulmonol. 1996 Apr;21(4):246-9.

PMID:
9121855
37.

A versatile simulator of evoked potentials.

Bach M, Stegmaier J, Röver J.

Electroencephalogr Clin Neurophysiol. 1984 Jan;57(1):97-8.

PMID:
6198148
38.

[Multiple calcified pulmonary foci and their pathogenetical classification].

STEGMAIER J, VOSSKUHLER P.

Med Monatsschr. 1956 Feb;10(2):100-5. German. No abstract available.

PMID:
13333610
39.

Benign tumors of the esophagus; report of a case of leiomyoma.

GARLICK WL, STEGMAIER JG.

Surgery. 1951 Jan;29(1):109-16. No abstract available.

PMID:
14809542

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