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Identification of quantitative trait loci for net form net blotch resistance in contemporary barley breeding germplasm from the USA using genome-wide association mapping.

Adhikari A, Steffenson BJ, Smith KP, Smith M, Dill-Macky R.

Theor Appl Genet. 2020 Jan 3. doi: 10.1007/s00122-019-03528-5. [Epub ahead of print]


Virulence of Leaf Rust Physiological Races in Iran From 2010 to 2017.

Nemati Z, Mostowfizadeh-Ghalamfarsa R, Dadkhodaie A, Mehrabi R, Steffenson BJ.

Plant Dis. 2019 Dec 18:PDIS06191340RE. doi: 10.1094/PDIS-06-19-1340-RE. [Epub ahead of print]


Emergence of the Ug99 lineage of the wheat stem rust pathogen through somatic hybridisation.

Li F, Upadhyaya NM, Sperschneider J, Matny O, Nguyen-Phuc H, Mago R, Raley C, Miller ME, Silverstein KAT, Henningsen E, Hirsch CD, Visser B, Pretorius ZA, Steffenson BJ, Schwessinger B, Dodds PN, Figueroa M.

Nat Commun. 2019 Nov 7;10(1):5068. doi: 10.1038/s41467-019-12927-7.


Variability in temperature-independent transpiration responses to evaporative demand correlate with nighttime water use and its circadian control across diverse wheat populations.

Tamang BG, Schoppach R, Monnens D, Steffenson BJ, Anderson JA, Sadok W.

Planta. 2019 Jul;250(1):115-127. doi: 10.1007/s00425-019-03151-0. Epub 2019 Apr 3.


Resistance gene cloning from a wild crop relative by sequence capture and association genetics.

Arora S, Steuernagel B, Gaurav K, Chandramohan S, Long Y, Matny O, Johnson R, Enk J, Periyannan S, Singh N, Asyraf Md Hatta M, Athiyannan N, Cheema J, Yu G, Kangara N, Ghosh S, Szabo LJ, Poland J, Bariana H, Jones JDG, Bentley AR, Ayliffe M, Olson E, Xu SS, Steffenson BJ, Lagudah E, Wulff BBH.

Nat Biotechnol. 2019 Feb;37(2):139-143. doi: 10.1038/s41587-018-0007-9. Epub 2019 Feb 4.


Introgression of rpg4/Rpg5 Into Barley Germplasm Provides Insights Into the Genetics of Resistance to Puccinia graminis f. sp. tritici Race TTKSK and Resources for Developing Resistant Cultivars.

Hernandez J, Steffenson BJ, Filichkin T, Fisk SP, Helgerson L, Meints B, Vining KJ, Marshall D, Del Blanco A, Chen X, Hayes PM.

Phytopathology. 2019 Jun;109(6):1018-1028. doi: 10.1094/PHYTO-09-18-0350-R. Epub 2019 May 7.


Resistance of Aegilops longissima to the Rusts of Wheat.

Huang S, Steffenson BJ, Sela H, Stinebaugh K.

Plant Dis. 2018 Jun;102(6):1124-1135. doi: 10.1094/PDIS-06-17-0880-RE. Epub 2018 Apr 2.


QTL Mapping of Fusarium Head Blight and Correlated Agromorphological Traits in an Elite Barley Cultivar Rasmusson.

Huang Y, Haas M, Heinen S, Steffenson BJ, Smith KP, Muehlbauer GJ.

Front Plant Sci. 2018 Aug 28;9:1260. doi: 10.3389/fpls.2018.01260. eCollection 2018.


Correction to: Mapping adult plant stem rust resistance in barley accessions Hietpas-5 and GAW-79.

Case AJ, Bhavani S, Macharia G, Pretorius Z, Coetzee V, Kloppers F, Tyagi P, Brown-Guedira G, Steffenson BJ.

Theor Appl Genet. 2018 Oct;131(10):2267. doi: 10.1007/s00122-018-3170-y.


Mapping adult plant stem rust resistance in barley accessions Hietpas-5 and GAW-79.

Case AJ, Bhavani S, Macharia G, Pretorius Z, Coetzee V, Kloppers F, Tyagi P, Brown-Guedira G, Steffenson BJ.

Theor Appl Genet. 2018 Oct;131(10):2245-2266. doi: 10.1007/s00122-018-3149-8. Epub 2018 Aug 14. Erratum in: Theor Appl Genet. 2018 Sep 1;:.


The gene conferring susceptibility to spot blotch caused by Cochliobolus sativus is located at the Mla locus in barley cultivar Bowman.

Leng Y, Zhao M, Wang R, Steffenson BJ, Brueggeman RS, Zhong S.

Theor Appl Genet. 2018 Jul;131(7):1531-1539. doi: 10.1007/s00122-018-3095-5. Epub 2018 Apr 16.


Genome Targeted Introgression of Resistance to African Stem Rust from Aegilops sharonensis into Bread Wheat.

Millet E, Steffenson BJ, Prins R, Sela H, Przewieslik-Allen AM, Pretorius ZA.

Plant Genome. 2017 Nov;10(3). doi: 10.3835/plantgenome2017.07.0061.


Genome-wide association study of stem rust resistance in a world collection of cultivated barley.

Case AJ, Bhavani S, Macharia G, Steffenson BJ.

Theor Appl Genet. 2018 Jan;131(1):107-126. doi: 10.1007/s00122-017-2989-y. Epub 2017 Nov 24.


Genome-Wide Association Mapping of Stem Rust Resistance in Hordeum vulgare subsp. spontaneum.

Sallam AH, Tyagi P, Brown-Guedira G, Muehlbauer GJ, Hulse A, Steffenson BJ.

G3 (Bethesda). 2017 Oct 5;7(10):3491-3507. doi: 10.1534/g3.117.300222.


Vulnerability of Barley to African Pathotypes of Puccinia graminis f. sp. tritici and Sources of Resistance.

Steffenson BJ, Case AJ, Pretorius ZA, Coetzee V, Kloppers FJ, Zhou H, Chai Y, Wanyera R, Macharia G, Bhavani S, Grando S.

Phytopathology. 2017 Aug;107(8):950-962. doi: 10.1094/PHYTO-11-16-0400-R. Epub 2017 May 24.


Discovery and characterization of two new stem rust resistance genes in Aegilops sharonensis.

Yu G, Champouret N, Steuernagel B, Olivera PD, Simmons J, Williams C, Johnson R, Moscou MJ, Hernández-Pinzón I, Green P, Sela H, Millet E, Jones JDG, Ward ER, Steffenson BJ, Wulff BBH.

Theor Appl Genet. 2017 Jun;130(6):1207-1222. doi: 10.1007/s00122-017-2882-8. Epub 2017 Mar 8.


Mapping quantitative trait loci conferring resistance to a widely virulent isolate of Cochliobolus sativus in wild barley accession PI 466423.

Haas M, Menke J, Chao S, Steffenson BJ.

Theor Appl Genet. 2016 Oct;129(10):1831-42. doi: 10.1007/s00122-016-2742-y. Epub 2016 Jun 17.


Sources of Stem Rust Resistance in Wheat-Alien Introgression Lines.

Rahmatov M, Rouse MN, Steffenson BJ, Andersson SC, Wanyera R, Pretorius ZA, Houben A, Kumarse N, Bhavani S, Johansson E.

Plant Dis. 2016 Jun;100(6):1101-1109. doi: 10.1094/PDIS-12-15-1448-RE. Epub 2016 Mar 23.


Development and Genetic Characterization of an Advanced Backcross-Nested Association Mapping (AB-NAM) Population of Wild × Cultivated Barley.

Nice LM, Steffenson BJ, Brown-Guedira GL, Akhunov ED, Liu C, Kono TJ, Morrell PL, Blake TK, Horsley RD, Smith KP, Muehlbauer GJ.

Genetics. 2016 Jul;203(3):1453-67. doi: 10.1534/genetics.116.190736. Epub 2016 May 10.


A new 2DS·2RL Robertsonian translocation transfers stem rust resistance gene Sr59 into wheat.

Rahmatov M, Rouse MN, Nirmala J, Danilova T, Friebe B, Steffenson BJ, Johansson E.

Theor Appl Genet. 2016 Jul;129(7):1383-1392. doi: 10.1007/s00122-016-2710-6. Epub 2016 Mar 29.


A Genome-Wide Association Study for Culm Cellulose Content in Barley Reveals Candidate Genes Co-Expressed with Members of the CELLULOSE SYNTHASE A Gene Family.

Houston K, Burton RA, Sznajder B, Rafalski AJ, Dhugga KS, Mather DE, Taylor J, Steffenson BJ, Waugh R, Fincher GB.

PLoS One. 2015 Jul 8;10(7):e0130890. doi: 10.1371/journal.pone.0130890. eCollection 2015.


Resistance of Aegilops Species from Israel to Widely Virulent African and Israeli Races of the Wheat Stem Rust Pathogen.

Scott JC, Manisterski J, Sela H, Ben-Yehuda P, Steffenson BJ.

Plant Dis. 2014 Oct;98(10):1309-1320. doi: 10.1094/PDIS-01-14-0062-RE.


Introgression of leaf rust and stripe rust resistance from Sharon goatgrass (Aegilops sharonensis Eig) into bread wheat (Triticum aestivum L.).

Millet E, Manisterski J, Ben-Yehuda P, Distelfeld A, Deek J, Wan A, Chen X, Steffenson BJ.

Genome. 2014 Jun;57(6):309-16. doi: 10.1139/gen-2014-0004. Epub 2014 Aug 15.


Genetic Characterization of Resistance to Wheat Stem Rust Race TTKSK in Landrace and Wild Barley Accessions Identifies the rpg4/Rpg5 Locus.

Mamo BE, Smith KP, Brueggeman RS, Steffenson BJ.

Phytopathology. 2015 Jan;105(1):99-109. doi: 10.1094/PHYTO-12-13-0340-R.


Two genomic regions contribute disproportionately to geographic differentiation in wild barley.

Fang Z, Gonzales AM, Clegg MT, Smith KP, Muehlbauer GJ, Steffenson BJ, Morrell PL.

G3 (Bethesda). 2014 Apr 22;4(7):1193-203. doi: 10.1534/g3.114.010561.


Association mapping of stem rust race TTKSK resistance in US barley breeding germplasm.

Zhou H, Steffenson BJ, Muehlbauer G, Wanyera R, Njau P, Ndeda S.

Theor Appl Genet. 2014 Jun;127(6):1293-304. doi: 10.1007/s00122-014-2297-8. Epub 2014 Apr 8.


Genetic analysis and molecular mapping of crown rust resistance in common wheat.

Niu Z, Puri KD, Chao S, Jin Y, Sun Y, Steffenson BJ, Maan SS, Xu SS, Zhong S.

Theor Appl Genet. 2014 Mar;127(3):609-19. doi: 10.1007/s00122-013-2245-z. Epub 2013 Dec 4.


Development of a genetic linkage map for Sharon goatgrass (Aegilops sharonensis) and mapping of a leaf rust resistance gene.

Olivera PD, Kilian A, Wenzl P, Steffenson BJ.

Genome. 2013 Jul;56(7):367-76. doi: 10.1139/gen-2013-0065. Epub 2013 Jul 17.


Comparative genome structure, secondary metabolite, and effector coding capacity across Cochliobolus pathogens.

Condon BJ, Leng Y, Wu D, Bushley KE, Ohm RA, Otillar R, Martin J, Schackwitz W, Grimwood J, MohdZainudin N, Xue C, Wang R, Manning VA, Dhillon B, Tu ZJ, Steffenson BJ, Salamov A, Sun H, Lowry S, LaButti K, Han J, Copeland A, Lindquist E, Barry K, Schmutz J, Baker SE, Ciuffetti LM, Grigoriev IV, Zhong S, Turgeon BG.

PLoS Genet. 2013;9(1):e1003233. doi: 10.1371/journal.pgen.1003233. Epub 2013 Jan 24.


Association mapping of Septoria speckled leaf blotch resistance in U.S. barley breeding germplasm.

Zhou H, Steffenson BJ.

Phytopathology. 2013 Jun;103(6):600-9. doi: 10.1094/PHYTO-10-12-0271-R.


Haplotype diversity and population structure in cultivated and wild barley evaluated for Fusarium head blight responses.

Huang Y, Millett BP, Beaubien KA, Dahl SK, Steffenson BJ, Smith KP, Muehlbauer GJ.

Theor Appl Genet. 2013 Mar;126(3):619-36. doi: 10.1007/s00122-012-2006-4. Epub 2012 Nov 3.


Novel septoria speckled leaf blotch resistance loci in a barley doubled-haploid population.

Luckert D, Toubia-Rahme H, Steffenson BJ, Choo TM, Molnar SJ.

Phytopathology. 2012 Jul;102(7):683-91. doi: 10.1094/PHYTO-06-11-0181.


Concerted action of two avirulent spore effectors activates Reaction to Puccinia graminis 1 (Rpg1)-mediated cereal stem rust resistance.

Nirmala J, Drader T, Lawrence PK, Yin C, Hulbert S, Steber CM, Steffenson BJ, Szabo LJ, von Wettstein D, Kleinhofs A.

Proc Natl Acad Sci U S A. 2011 Aug 30;108(35):14676-81. doi: 10.1073/pnas.1111771108. Epub 2011 Aug 22.


Trichothecene profiling and population genetic analysis of Gibberella zeae from barley in North Dakota and Minnesota.

Burlakoti RR, Neate SM, Adhikari TB, Gyawali S, Salas B, Steffenson BJ, Schwarz PB.

Phytopathology. 2011 Jun;101(6):687-95. doi: 10.1094/PHYTO-04-10-0101.


Genetic Characterization of Barley Net Blotch Resistance Genes.

O'Boyle PD, Brooks WS, Steffenson BJ, Stromberg EL, Griffey CA.

Plant Dis. 2011 Jan;95(1):19-23. doi: 10.1094/PDIS-02-10-0096.


Association mapping of spot blotch resistance in wild barley.

Roy JK, Smith KP, Muehlbauer GJ, Chao S, Close TJ, Steffenson BJ.

Mol Breed. 2010 Aug;26(2):243-256. Epub 2010 Mar 10.


Resistance to stem rust race TTKSK maps to the rpg4/Rpg5 complex of chromosome 5H of barley.

Steffenson BJ, Jin Y, Brueggeman RS, Kleinhofs A, Sun Y.

Phytopathology. 2009 Oct;99(10):1135-41. doi: 10.1094/PHYTO-99-10-1135.


The rpg4/Rpg5 stem rust resistance locus in barley: resistance genes and cytoskeleton dynamics.

Brueggeman R, Steffenson BJ, Kleinhofs A.

Cell Cycle. 2009 Apr 1;8(7):977-81. Epub 2009 Apr 4.


Towards systems genetic analyses in barley: Integration of phenotypic, expression and genotype data into GeneNetwork.

Druka A, Druka I, Centeno AG, Li H, Sun Z, Thomas WT, Bonar N, Steffenson BJ, Ullrich SE, Kleinhofs A, Wise RP, Close TJ, Potokina E, Luo Z, Wagner C, Schweizer GF, Marshall DF, Kearsey MJ, Williams RW, Waugh R.

BMC Genet. 2008 Nov 18;9:73. doi: 10.1186/1471-2156-9-73.


Genetics of Virulence in Cochliobolus sativus and Resistance in Barley.

Valjavec-Gratian M, Steffenson BJ.

Phytopathology. 1997 Nov;87(11):1140-3. doi: 10.1094/PHYTO.1997.87.11.1140.


Chromosomal location and genetic relationship of leaf rust resistance genes rph9 and rph12 in barley.

Borovkova IG, Jin Y, Steffenson BJ.

Phytopathology. 1998 Jan;88(1):76-80. doi: 10.1094/PHYTO.1998.88.1.76.


Identification of Molecular Genetic Markers in Pyrenophora teres f. teres Associated with Low Virulence on 'Harbin' Barley.

Weiland JJ, Steffenson BJ, Cartwright RD, Webster RK.

Phytopathology. 1999 Feb;89(2):176-81. doi: 10.1094/PHYTO.1999.89.2.176.


Genes Governing Resistance to Puccinia hordei in Thirteen Spring Barley Accessions.

Brooks WS, Griffey CA, Steffenson BJ, Vivar HE.

Phytopathology. 2000 Oct;90(10):1131-6. doi: 10.1094/PHYTO.2000.90.10.1131.


Mapping of quantitative trait Loci for fusarium head blight resistance in barley.

Ma Z, Steffenson BJ, Prom LK, Lapitan NL.

Phytopathology. 2000 Oct;90(10):1079-88. doi: 10.1094/PHYTO.2000.90.10.1079.


Sources and genetics of crown rust resistance in barley.

Jin Y, Steffenson BJ.

Phytopathology. 2002 Oct;92(10):1064-7. doi: 10.1094/PHYTO.2002.92.10.1064.


Genetics of resistance to wheat leaf rust, stem rust, and powdery mildew in Aegilops sharonensis.

Olivera PD, Millet E, Anikster Y, Steffenson BJ.

Phytopathology. 2008 Mar;98(3):353-8. doi: 10.1094/PHYTO-98-3-0353.


Molecular mapping and marker-assisted selection of genes for septoria speckled leaf blotch resistance in barley.

Zhong S, Toubia-Rahme H, Steffenson BJ, Smith KP.

Phytopathology. 2006 Sep;96(9):993-9. doi: 10.1094/PHYTO-96-0993.


Virulence and Molecular Diversity in Cochliobolus sativus.

Zhong S, Steffenson BJ.

Phytopathology. 2001 May;91(5):469-76. doi: 10.1094/PHYTO.2001.91.5.469.


Allele sequencing of the barley stem rust resistance gene Rpg1 identifies regions relevant to disease resistance.

Mirlohi A, Brueggeman R, Drader T, Nirmala J, Steffenson BJ, Kleinhofs A.

Phytopathology. 2008 Aug;98(8):910-8. doi: 10.1094/PHYTO-98-8-0910.


Molecular mapping of Loci conferring resistance to different pathotypes of the spot blotch pathogen in barley.

Bilgic H, Steffenson BJ, Hayes PM.

Phytopathology. 2006 Jul;96(7):699-708. doi: 10.1094/PHYTO-96-0699.

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