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Items: 1 to 50 of 339

1.

Should you repeat mismatch repair testing in tumour recurrences? An evaluation of repeat mismatch repair testing by immunohistochemistry in recurrent tumours of the gastrointestinal and gynaecological tracts.

Aird JJ, Steel MJ, Chow C, Ho J, Wolber R, Gilks CB, Hoang LN, Schaeffer DF.

Histopathology. 2019 Nov 2. doi: 10.1111/his.14026. [Epub ahead of print]

PMID:
31677289
2.

Combinatorial properties of phylogenetic diversity indices.

Wicke K, Steel M.

J Math Biol. 2019 Oct 29. doi: 10.1007/s00285-019-01438-0. [Epub ahead of print]

PMID:
31664522
3.

Metastatic Gallbladder Adenocarcinoma to the Endometrium: A Case Report and Review of Literature.

Oh J, Steel M, Conklin C, Aquino-Parsons C.

Cureus. 2019 Jul 28;11(7):e5258. doi: 10.7759/cureus.5258.

4.

A Darwinian Uncertainty Principle.

Gascuel O, Steel M.

Syst Biol. 2019 Aug 20. pii: syz054. doi: 10.1093/sysbio/syz054. [Epub ahead of print]

PMID:
31432087
5.

: A unifying framework for modelling evolutionary trees.

Steel M.

Theor Popul Biol. 2019 Jul 4. pii: S0040-5809(19)30037-1. doi: 10.1016/j.tpb.2019.07.002. [Epub ahead of print] No abstract available.

PMID:
31279730
6.

Cytohistological diagnosis of pancreatic serous cystadenoma: a multimodal approach.

Steel M, Rao S, Ho J, Donnellan F, Yang HM, Schaeffer DF.

J Clin Pathol. 2019 Sep;72(9):615-621. doi: 10.1136/jclinpath-2019-205872. Epub 2019 Jun 23.

PMID:
31235542
7.

Genomic characterization of a well-differentiated grade 3 pancreatic neuroendocrine tumor.

Williamson LM, Steel M, Grewal JK, Thibodeau ML, Zhao EY, Loree JM, Yang KC, Gorski SM, Mungall AJ, Mungall KL, Moore RA, Marra MA, Laskin J, Renouf DJ, Schaeffer DF, Jones SJM.

Cold Spring Harb Mol Case Stud. 2019 Jun 3;5(3). pii: a003814. doi: 10.1101/mcs.a003814. Print 2019 Jun.

8.

Swapping Birth and Death: Symmetries and Transformations in Phylodynamic Models.

Stadler T, Steel M.

Syst Biol. 2019 Sep 1;68(5):852-858. doi: 10.1093/sysbio/syz039.

9.

A class of phylogenetic networks reconstructable from ancestral profiles.

Erdős PL, Semple C, Steel M.

Math Biosci. 2019 Jul;313:33-40. doi: 10.1016/j.mbs.2019.04.009. Epub 2019 May 8.

PMID:
31077680
10.

Autocatalytic networks in biology: structural theory and algorithms.

Steel M, Hordijk W, Xavier JC.

J R Soc Interface. 2019 Feb 28;16(151):20180808. doi: 10.1098/rsif.2018.0808.

PMID:
30958202
11.

Suspended mid-infrared waveguides for Stimulated Brillouin Scattering.

Schmidt MK, Poulton CG, Mashanovich GZ, Reed GT, Eggleton BJ, Steel MJ.

Opt Express. 2019 Feb 18;27(4):4976-4989. doi: 10.1364/OE.27.004976.

PMID:
30876105
12.

Molecular Diversity Required for the Formation of Autocatalytic Sets.

Hordijk W, Steel M, Kauffman SA.

Life (Basel). 2019 Mar 1;9(1). pii: E23. doi: 10.3390/life9010023.

13.

Quantifying the accuracy of ancestral state prediction in a phylogenetic tree under maximum parsimony.

Herbst L, Li H, Steel M.

J Math Biol. 2019 May;78(6):1953-1979. doi: 10.1007/s00285-019-01330-x. Epub 2019 Feb 13.

PMID:
30758663
14.

Autocatalytic Networks at the Basis of Life's Origin and Organization.

Hordijk W, Steel M.

Life (Basel). 2018 Dec 8;8(4). pii: E62. doi: 10.3390/life8040062. Review.

15.

Vitamin D deficiency, endothelial function and bone biomarkers in post-kidney transplantation patients from North India.

Yadav AK, Tiwana S, Steel M, Ramachandran R, Kaski JC, Jha V, Banerjee D.

Int Urol Nephrol. 2019 Jan;51(1):181-186. doi: 10.1007/s11255-018-2014-7. Epub 2018 Nov 19.

16.

Tree-based networks: characterisations, metrics, and support trees.

Pons JC, Semple C, Steel M.

J Math Biol. 2019 Mar;78(4):899-918. doi: 10.1007/s00285-018-1296-9. Epub 2018 Oct 3.

PMID:
30283985
17.

PGE2 production at sites of tissue injury promotes an anti-inflammatory neutrophil phenotype and determines the outcome of inflammation resolution in vivo.

Loynes CA, Lee JA, Robertson AL, Steel MJ, Ellett F, Feng Y, Levy BD, Whyte MKB, Renshaw SA.

Sci Adv. 2018 Sep 5;4(9):eaar8320. doi: 10.1126/sciadv.aar8320. eCollection 2018 Sep.

18.

Elastic Purcell Effect.

Schmidt MK, Helt LG, Poulton CG, Steel MJ.

Phys Rev Lett. 2018 Aug 10;121(6):064301. doi: 10.1103/PhysRevLett.121.064301.

PMID:
30141687
19.

Species notions that combine phylogenetic trees and phenotypic partitions.

Hoppe A, Türpitz S, Steel M.

J Math Biol. 2019 Jan;78(1-2):117-134. doi: 10.1007/s00285-018-1269-z. Epub 2018 Jul 24.

PMID:
30043242
20.

A multi-step transcriptional cascade underlies vascular regeneration in vivo.

Shirali AS, Romay MC, McDonald AI, Su T, Steel ME, Iruela-Arispe ML.

Sci Rep. 2018 Apr 3;8(1):5430. doi: 10.1038/s41598-018-23653-3.

21.

Phylogenetic Flexibility via Hall-Type Inequalities and Submodularity.

Huber KT, Moulton V, Steel M.

Bull Math Biol. 2019 Feb;81(2):598-617. doi: 10.1007/s11538-018-0419-1. Epub 2018 Mar 27.

22.

Digital waveguide adiabatic passage part 2: experiment.

Ng V, Vaitkus JA, Chaboyer ZJ, Nguyen T, Dawes JM, Withford MJ, Greentree AD, Steel MJ.

Opt Express. 2017 Feb 6;25(3):2552-2559. doi: 10.1364/OE.25.002552.

PMID:
29519099
23.

On the information content of discrete phylogenetic characters.

Bordewich M, Deutschmann IM, Fischer M, Kasbohm E, Semple C, Steel M.

J Math Biol. 2018 Sep;77(3):527-544. doi: 10.1007/s00285-017-1198-2. Epub 2017 Dec 16.

PMID:
29248985
24.

Effect of dark counts on single-photon heralding with quasi-number-resolving detection schemes.

Helt LG, Steel MJ.

Opt Lett. 2017 Dec 1;42(23):4792-4795. doi: 10.1364/OL.42.004792.

PMID:
29216111
25.

Evolutionary isolation and phylogenetic diversity loss under random extinction events.

Steel M, Pourfaraj V, Chaudhary A, Mooers A.

J Theor Biol. 2018 Feb 7;438:151-155. doi: 10.1016/j.jtbi.2017.11.005. Epub 2017 Nov 13.

PMID:
29146280
26.

A note on random catalytic branching processes.

Steel M, Kauffman S.

J Theor Biol. 2018 Jan 21;437:222-224. doi: 10.1016/j.jtbi.2017.10.024.

PMID:
29080779
27.

Lasing in ring resonators by stimulated Brillouin scattering in the presence of nonlinear loss.

Mirnaziry SR, Wolff C, Steel MJ, Morrison B, Eggleton BJ, Poulton CG.

Opt Express. 2017 Oct 2;25(20):23619-23633. doi: 10.1364/OE.25.023619.

PMID:
29041313
28.

Autocatalytic networks in cognition and the origin of culture.

Gabora L, Steel M.

J Theor Biol. 2017 Oct 27;431:87-95. doi: 10.1016/j.jtbi.2017.07.022. Epub 2017 Jul 25.

29.

Non-communicable diseases and related risk behaviors among men and women living with HIV in Cambodia: findings from a cross-sectional study.

Chhoun P, Ngin C, Tuot S, Pal K, Steel M, Dionisio J, Pearson H, Mburu G, Brody C, Yi S.

Int J Equity Health. 2017 Jul 14;16(1):125. doi: 10.1186/s12939-017-0622-y.

30.

Minimum triplet covers of binary phylogenetic X-trees.

Huber KT, Moulton V, Steel M.

J Math Biol. 2017 Dec;75(6-7):1827-1840. doi: 10.1007/s00285-017-1117-6. Epub 2017 Jun 12.

31.

Digital waveguide adiabatic passage part 1: theory.

Vaitkus JA, Steel MJ, Greentree AD.

Opt Express. 2017 Mar 6;25(5):5466-5479. doi: 10.1364/OE.25.005466.

PMID:
28380807
32.

FOLFOX and intensified split-course chemoradiation as initial treatment for rectal cancer with synchronous metastases.

Bird T, Michael M, Bressel M, Chu J, Chander S, Cooray P, McKendrick J, Jefford M, Heriot A, Steel M, Leong T, Ngan S.

Acta Oncol. 2017 May;56(5):646-652. doi: 10.1080/0284186X.2017.1296584. Epub 2017 Mar 16.

PMID:
28301974
33.

The optimal rate for resolving a near-polytomy in a phylogeny.

Steel M, Leuenberger C.

J Theor Biol. 2017 May 7;420:174-179. doi: 10.1016/j.jtbi.2017.02.037. Epub 2017 Mar 3.

PMID:
28263815
34.

Parasitic Photon-Pair Suppression via Photonic Stop-Band Engineering.

Helt LG, Brańczyk AM, Liscidini M, Steel MJ.

Phys Rev Lett. 2017 Feb 17;118(7):073603. doi: 10.1103/PhysRevLett.118.073603. Epub 2017 Feb 17.

PMID:
28256861
35.

Bayesian Phylogenetic Estimation of Clade Ages Supports Trans-Atlantic Dispersal of Cichlid Fishes.

Matschiner M, Musilová Z, Barth JM, Starostová Z, Salzburger W, Steel M, Bouckaert R.

Syst Biol. 2017 Jan 1;66(1):3-22. doi: 10.1093/sysbio/syw076.

PMID:
28173588
36.

Can We "Future-Proof" Consensus Trees?

Bryant D, Francis A, Steel M.

Syst Biol. 2017 Jul 1;66(4):611-619. doi: 10.1093/sysbio/syx030.

PMID:
28169402
37.

Chasing the tail: The emergence of autocatalytic networks.

Hordijk W, Steel M.

Biosystems. 2017 Feb;152:1-10. doi: 10.1016/j.biosystems.2016.12.002. Epub 2016 Dec 25. Review.

PMID:
28027958
38.

A simple statistical test of taxonomic or functional homogeneity using replicated microbiome sequencing samples.

Huson DH, Steel M, El-Hadidi M, Mitra S, Peter S, Willmann M.

J Biotechnol. 2017 May 20;250:45-50. doi: 10.1016/j.jbiotec.2016.10.020. Epub 2016 Oct 27.

39.

Survival Impact of Adjuvant Chemotherapy for Resected Locally Advanced Rectal Adenocarcinoma.

Tay RY, Jamnagerwalla M, Steel M, Wong HL, McKendrick JJ, Faragher I, Kosmider S, Hastie I, Desai J, Tacey M, Gibbs P, Wong R.

Clin Colorectal Cancer. 2017 Jun;16(2):e45-e54. doi: 10.1016/j.clcc.2016.09.011. Epub 2016 Oct 6.

PMID:
27825672
40.

On-chip generation of heralded photon-number states.

Vergyris P, Meany T, Lunghi T, Sauder G, Downes J, Steel MJ, Withford MJ, Alibart O, Tanzilli S.

Sci Rep. 2016 Oct 24;6:35975. doi: 10.1038/srep35975.

41.

Dysphoria is a risk factor for depression in medically ill older people.

Mukaetova-Ladinska EB, Steel M, Coppock M, Cosker G, James P, Scully A, McNally RJ.

Int J Geriatr Psychiatry. 2016 Nov;31(11):1233-1240. doi: 10.1002/gps.4432. Epub 2016 Feb 2.

PMID:
26834033
42.

Phylogenetic mixtures and linear invariants for equal input models.

Casanellas M, Steel M.

J Math Biol. 2017 Apr;74(5):1107-1138. doi: 10.1007/s00285-016-1055-8. Epub 2016 Sep 7.

PMID:
27604275
43.

Impact of Surgical Complications Following Resection of Locally Advanced Rectal Adenocarcinoma on Adjuvant Chemotherapy Delivery and Survival Outcomes.

Jamnagerwalla M, Tay R, Steel M, Keck J, Jones I, Faragher I, Gibbs P, Wong R.

Dis Colon Rectum. 2016 Oct;59(10):916-24. doi: 10.1097/DCR.0000000000000659.

PMID:
27602922
44.

Domain engineering algorithm for practical and effective photon sources.

Tambasco JL, Boes A, Helt LG, Steel MJ, Mitchell A.

Opt Express. 2016 Aug 22;24(17):19616-26. doi: 10.1364/OE.24.019616.

PMID:
27557240
45.

Circulating tumor DNA analysis detects minimal residual disease and predicts recurrence in patients with stage II colon cancer.

Tie J, Wang Y, Tomasetti C, Li L, Springer S, Kinde I, Silliman N, Tacey M, Wong HL, Christie M, Kosmider S, Skinner I, Wong R, Steel M, Tran B, Desai J, Jones I, Haydon A, Hayes T, Price TJ, Strausberg RL, Diaz LA Jr, Papadopoulos N, Kinzler KW, Vogelstein B, Gibbs P.

Sci Transl Med. 2016 Jul 6;8(346):346ra92. doi: 10.1126/scitranslmed.aaf6219.

46.

Engineering integrated photonics for heralded quantum gates.

Meany T, Biggerstaff DN, Broome MA, Fedrizzi A, Delanty M, Steel MJ, Gilchrist A, Marshall GD, White AG, Withford MJ.

Sci Rep. 2016 Jun 10;6:25126. doi: 10.1038/srep25126.

47.

Impact of anastomotic leak on recurrence and survival after colorectal cancer surgery: a BioGrid Australia analysis.

Sammour T, Hayes IP, Jones IT, Steel MC, Faragher I, Gibbs P.

ANZ J Surg. 2018 Jan;88(1-2):E6-E10. doi: 10.1111/ans.13648. Epub 2016 Jun 3.

PMID:
27255690
48.

Folding and unfolding phylogenetic trees and networks.

Huber KT, Moulton V, Steel M, Wu T.

J Math Biol. 2016 Dec;73(6-7):1761-1780. Epub 2016 Apr 23.

49.

Active temporal multiplexing of indistinguishable heralded single photons.

Xiong C, Zhang X, Liu Z, Collins MJ, Mahendra A, Helt LG, Steel MJ, Choi DY, Chae CJ, Leong PH, Eggleton BJ.

Nat Commun. 2016 Mar 21;7:10853. doi: 10.1038/ncomms10853.

50.

QUANTUM OPTICS. The time is right for multiphoton entangled states.

Peacock AC, Steel MJ.

Science. 2016 Mar 11;351(6278):1152-3. doi: 10.1126/science.aaf2919. No abstract available.

PMID:
26965612

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