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Items: 30

1.

Genome Sequences of Three Cruciviruses Found in the Willamette Valley (Oregon).

de la Higuera I, Torrance EL, Pratt AA, Kasun GW, Maluenda A, Stedman KM.

Microbiol Resour Announc. 2019 Jun 6;8(23). pii: e00447-19. doi: 10.1128/MRA.00447-19.

2.

Comparative genetic and genomic analysis of the novel fusellovirus Sulfolobus spindle-shaped virus 10.

Goodman DA, Stedman KM.

Virus Evol. 2018 Aug 6;4(2):vey022. doi: 10.1093/ve/vey022. eCollection 2018 Jul.

3.

Viral Recombination: Ecology, Evolution, and Pathogenesis.

Stedman KM.

Viruses. 2018 Jul 6;10(7). pii: E358. doi: 10.3390/v10070358.

4.

Sulfurisphaera javensis sp. nov., a hyperthermophilic and acidophilic archaeon isolated from Indonesian hot spring, and reclassification of Sulfolobus tokodaii Suzuki et al. 2002 as Sulfurisphaera tokodaii comb. nov.

Tsuboi K, Sakai HD, Nur N, Stedman KM, Kurosawa N, Suwanto A.

Int J Syst Evol Microbiol. 2018 Jun;68(6):1907-1913. doi: 10.1099/ijsem.0.002765. Epub 2018 Apr 19.

PMID:
29671720
5.

Astrovirology: Viruses at Large in the Universe.

Berliner AJ, Mochizuki T, Stedman KM.

Astrobiology. 2018 Feb;18(2):207-223. doi: 10.1089/ast.2017.1649. Epub 2018 Jan 10. Review.

PMID:
29319335
6.

Genetic Analysis of the Major Capsid Protein of the Archaeal Fusellovirus SSV1: Mutational Flexibility and Conformational Change.

Iverson EA, Goodman DA, Gorchels ME, Stedman KM.

Genes (Basel). 2017 Dec 8;8(12). pii: E373. doi: 10.3390/genes8120373.

7.

Extreme Mutation Tolerance: Nearly Half of the Archaeal Fusellovirus Sulfolobus Spindle-Shaped Virus 1 Genes Are Not Required for Virus Function, Including the Minor Capsid Protein Gene vp3.

Iverson EA, Goodman DA, Gorchels ME, Stedman KM.

J Virol. 2017 Apr 28;91(10). pii: e02406-16. doi: 10.1128/JVI.02406-16. Print 2017 May 15.

8.

PCR-activated cell sorting as a general, cultivation-free method for high-throughput identification and enrichment of virus hosts.

Lim SW, Lance ST, Stedman KM, Abate AR.

J Virol Methods. 2017 Apr;242:14-21. doi: 10.1016/j.jviromet.2016.12.009. Epub 2016 Dec 29.

9.

Peering below the diffraction limit: robust and specific sorting of viruses with flow cytometry.

Lance ST, Sukovich DJ, Stedman KM, Abate AR.

Virol J. 2016 Dec 1;13(1):201.

10.

Life on the Edge-the Biology of Organisms Inhabiting Extreme Environments: An Introduction to the Symposium.

Lindgren AR, Buckley BA, Eppley SM, Reysenbach AL, Stedman KM, Wagner JT.

Integr Comp Biol. 2016 Oct;56(4):493-9. doi: 10.1093/icb/icw094. Epub 2016 Jul 28.

PMID:
27471225
11.

Modeling Microvirus Capsid Protein Evolution Utilizing Metagenomic Sequence Data.

Diemer GS, Stedman KM.

J Mol Evol. 2016 Aug;83(1-2):38-49. doi: 10.1007/s00239-016-9751-y. Epub 2016 Jul 6.

PMID:
27383372
12.

Deep Recombination: RNA and ssDNA Virus Genes in DNA Virus and Host Genomes.

Stedman KM.

Annu Rev Virol. 2015 Nov;2(1):203-17. doi: 10.1146/annurev-virology-100114-055127. Epub 2015 Sep 2. Review.

PMID:
26958913
13.

Structural insights into the architecture of the hyperthermophilic Fusellovirus SSV1.

Stedman KM, DeYoung M, Saha M, Sherman MB, Morais MC.

Virology. 2015 Jan 1;474:105-9. doi: 10.1016/j.virol.2014.10.014. Epub 2014 Nov 14.

14.

Reversible inactivation and desiccation tolerance of silicified viruses.

Laidler JR, Shugart JA, Cady SL, Bahjat KS, Stedman KM.

J Virol. 2013 Dec;87(24):13927-9. doi: 10.1128/JVI.02825-13. Epub 2013 Oct 9.

15.

Microbial biogeochemistry of Boiling Springs Lake: a physically dynamic, oligotrophic, low-pH geothermal ecosystem.

Siering PL, Wolfe GV, Wilson MS, Yip AN, Carey CM, Wardman CD, Shapiro RS, Stedman KM, Kyle J, Yuan T, Van Nostrand JD, He Z, Zhou J.

Geobiology. 2013 Jul;11(4):356-76. doi: 10.1111/gbi.12041. Epub 2013 May 17.

PMID:
23679065
16.

Codon usage frequency of RNA virus genomes from high-temperature acidic-environment metagenomes.

Stedman KM, Kosmicki NR, Diemer GS.

J Virol. 2013 Feb;87(3):1919. doi: 10.1128/JVI.02610-12. No abstract available.

17.

Differential virus host-ranges of the Fuselloviridae of hyperthermophilic Archaea: implications for evolution in extreme environments.

Ceballos RM, Marceau CD, Marceau JO, Morris S, Clore AJ, Stedman KM.

Front Microbiol. 2012 Aug 24;3:295. doi: 10.3389/fmicb.2012.00295. eCollection 2012.

18.
19.

Growth phase-dependent gene regulation in vivo in Sulfolobus solfataricus.

DeYoung M, Thayer M, van der Oost J, Stedman KM.

FEMS Microbiol Lett. 2011 Aug;321(2):92-9. doi: 10.1111/j.1574-6968.2011.02313.x. Epub 2011 Jun 6.

20.

Virus silicification under simulated hot spring conditions.

Laidler JR, Stedman KM.

Astrobiology. 2010 Jul-Aug;10(6):569-76. doi: 10.1089/ast.2010.0463.

PMID:
20735248
21.

The SSV1 viral integrase is not essential.

Clore AJ, Stedman KM.

Virology. 2007 Apr 25;361(1):103-11. Epub 2006 Dec 18.

22.

Two novel conjugative plasmids from a single strain of Sulfolobus.

Erauso G, Stedman KM, van de Werken HJ, Zillig W, van der Oost J.

Microbiology. 2006 Jul;152(Pt 7):1951-68.

PMID:
16804171
23.

Proteomic mapping of the hyperthermophilic and acidophilic archaeon Sulfolobus solfataricus P2.

Barry RC, Young MJ, Stedman KM, Dratz EA.

Electrophoresis. 2006 Jul;27(14):2970-83.

PMID:
16721906
24.

Relationships between fuselloviruses infecting the extremely thermophilic archaeon Sulfolobus: SSV1 and SSV2.

Stedman KM, She Q, Phan H, Arnold HP, Holz I, Garrett RA, Zillig W.

Res Microbiol. 2003 May;154(4):295-302.

PMID:
12798235
25.
26.

pING family of conjugative plasmids from the extremely thermophilic archaeon Sulfolobus islandicus: insights into recombination and conjugation in Crenarchaeota.

Stedman KM, She Q, Phan H, Holz I, Singh H, Prangishvili D, Garrett R, Zillig W.

J Bacteriol. 2000 Dec;182(24):7014-20.

28.

Genetic profile of pNOB8 from Sulfolobus: the first conjugative plasmid from an archaeon.

She Q, Phan H, Garrett RA, Albers SV, Stedman KM, Zillig W.

Extremophiles. 1998 Nov;2(4):417-25.

PMID:
9827331
29.
30.

Prokaryotic enhancer-binding proteins reflect eukaryote-like modularity: the puzzle of nitrogen regulatory protein C.

North AK, Klose KE, Stedman KM, Kustu S.

J Bacteriol. 1993 Jul;175(14):4267-73. Review. No abstract available.

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