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Items: 27

1.

Big Data Approaches to Phenotyping Acute Ischemic Stroke Using Automated Lesion Segmentation of Multi-Center Magnetic Resonance Imaging Data.

Wu O, Winzeck S, Giese AK, Hancock BL, Etherton MR, Bouts MJRJ, Donahue K, Schirmer MD, Irie RE, Mocking SJT, McIntosh EC, Bezerra R, Kamnitsas K, Frid P, Wasselius J, Cole JW, Xu H, Holmegaard L, Jiménez-Conde J, Lemmens R, Lorentzen E, McArdle PF, Meschia JF, Roquer J, Rundek T, Sacco RL, Schmidt R, Sharma P, Slowik A, Stanne TM, Thijs V, Vagal A, Woo D, Bevan S, Kittner SJ, Mitchell BD, Rosand J, Worrall BB, Jern C, Lindgren AG, Maguire J, Rost NS.

Stroke. 2019 Jul;50(7):1734-1741. doi: 10.1161/STROKEAHA.119.025373. Epub 2019 Jun 10.

PMID:
31177973
2.

Hemostatic Genes Exhibit a High Degree of Allele-Specific Regulation in Liver.

Olsson Lindvall M, Hansson L, Klasson S, Davila Lopez M, Jern C, Stanne TM.

Thromb Haemost. 2019 Jul;119(7):1072-1083. doi: 10.1055/s-0039-1687879. Epub 2019 Apr 29.

3.

Genome-wide association meta-analysis of functional outcome after ischemic stroke.

Söderholm M, Pedersen A, Lorentzen E, Stanne TM, Bevan S, Olsson M, Cole JW, Fernandez-Cadenas I, Hankey GJ, Jimenez-Conde J, Jood K, Lee JM, Lemmens R, Levi C, Mitchell BD, Norrving B, Rannikmäe K, Rost NS, Rosand J, Rothwell PM, Scott R, Strbian D, Sturm JW, Sudlow C, Traylor M, Thijs V, Tatlisumak T, Woo D, Worrall BB, Maguire JM, Lindgren A, Jern C; International Stroke Genetics Consortium, the NINDS-SiGN Consortium, and the Genetics of Ischaemic Stroke Functional Outcome (GISCOME) Network.

Neurology. 2019 Mar 19;92(12):e1271-e1283. doi: 10.1212/WNL.0000000000007138. Epub 2019 Feb 22.

4.

PATJ Low Frequency Variants Are Associated With Worse Ischemic Stroke Functional Outcome.

Mola-Caminal M, Carrera C, Soriano-Tárraga C, Giralt-Steinhauer E, Díaz-Navarro RM, Tur S, Jiménez C, Medina-Dols A, Cullell N, Torres-Aguila NP, Muiño E, Rodríguez-Campello A, Ois A, Cuadrado-Godia E, Vivanco-Hidalgo RM, Hernandez-Guillamon M, Solé M, Delgado P, Bustamante A, García-Berrocoso T, Mendióroz M, Castellanos M, Serena J, Martí-Fàbregas J, Segura T, Serrano-Heras G, Obach V, Ribó M, Molina CA, Alvarez-Sabín J, Palomeras E, Freijo M, Font MA, Rosand J, Rost NS, Gallego-Fabrega C, Lee JM, Heitsch L, Ibanez L, Cruchaga C, Phuah CL, Lemmens R, Thijs V, Lindgren A, Maguire J, Rannikmae K, Sudlow CL, Jern C, Stanne TM, Lorentzen E, Muñoz-Narbona L, Dávalos A, López-Cancio E, Worrall BB, Woo D, Kittner SJ, Mitchell BD, Montaner J, Roquer J, Krupinski J, Estivill X, Rabionet R, Vives-Bauzá C, Fernández-Cadenas I, Jiménez-Conde J.

Circ Res. 2019 Jan 4;124(1):114-120. doi: 10.1161/CIRCRESAHA.118.313533.

PMID:
30582445
5.

Genetics of the thrombomodulin-endothelial cell protein C receptor system and the risk of early-onset ischemic stroke.

Cole JW, Xu H, Ryan K, Jaworek T, Dueker N, McArdle P, Gaynor B, Cheng YC, O'Connell J, Bevan S, Malik R, Ahmed NU, Amouyel P, Anjum S, Bis JC, Crosslin D, Danesh J, Engelter ST, Fornage M, Frossard P, Gieger C, Giese AK, Grond-Ginsbach C, Ho WK, Holliday E, Hopewell J, Hussain M, Iqbal W, Jabeen S, Jannes J, Kamal A, Kamatani Y, Kanse S, Kloss M, Lathrop M, Leys D, Lindgren A, Longstreth WT Jr, Mahmood K, Meisinger C, Metso TM, Mosley T Jr, Müller-Nurasyid M, Norrving B, Parati E, Peters A, Pezzini A, Quereshi I, Rasheed A, Rauf A, Salam T, Shen J, Słowik A, Stanne T, Strauch K, Tatlisumak T, Thijs VN, Tiedt S, Traylor M, Waldenberger M, Walters M, Zhao W, Boncoraglio G, Debette S, Jern C, Levi C, Markus H, Meschia J, Rolfs A, Rothwell P, Saleheen D, Seshadri S, Sharma P, Sudlow C, Worrall B; METASTROKE Consortium of the ISGC; WTCCC-2 Consortium, Stine OC, Kittner SJ, Mitchell BD.

PLoS One. 2018 Nov 1;13(11):e0206554. doi: 10.1371/journal.pone.0206554. eCollection 2018.

6.

Genome-wide analysis of genetic determinants of circulating factor VII-activating protease (FSAP) activity.

Olsson M, Stanne TM, Pedersen A, Lorentzen E, Kara E, Martinez-Palacian A, Rønnow Sand NP, Jacobsen AF, Sandset PM, Sidelmann JJ, Engström G, Melander O, Kanse SM, Jern C.

J Thromb Haemost. 2018 Oct;16(10):2024-2034. doi: 10.1111/jth.14258. Epub 2018 Aug 24.

7.

Fibrinogen concentrations predict long-term cognitive outcome in young ischemic stroke patients.

Pedersen A, Stanne TM, Redfors P, Viken J, Samuelsson H, Nilsson S, Jood K, Jern C.

Res Pract Thromb Haemost. 2018 Jan 29;2(2):339-346. doi: 10.1002/rth2.12078. eCollection 2018 Apr.

8.

A Genome-wide Study of Common and Rare Genetic Variants Associated with Circulating Thrombin Activatable Fibrinolysis Inhibitor.

Stanne TM, Olsson M, Lorentzen E, Pedersen A, Gummesson A, Gils A, Jood K, Engström G, Melander O, Declerck PJ, Jern C.

Thromb Haemost. 2018 Feb;118(2):298-308. doi: 10.1160/TH17-04-0249. Epub 2018 Jan 29.

9.

GISCOME - Genetics of Ischaemic Stroke Functional Outcome network: A protocol for an international multicentre genetic association study.

Maguire JM, Bevan S, Stanne TM, Lorenzen E, Fernandez-Cadenas I, Hankey GJ, Jimenez-Conde J, Jood K, Lee JM, Lemmens R, Levi C, Norrving B, Rannikmae K, Rost N, Rosand J, Rothwell PM, Scott R, Strbian D, Sturm J, Sudlow C, Traylor M, Thijs V, Tatlisumak T, Wieloch T, Woo D, Worrall BB, Jern C, Lindgren A.

Eur Stroke J. 2017 Sep;2(3):229-237. doi: 10.1177/2396987317704547. Epub 2017 Apr 19.

10.

Exome array analysis of ischaemic stroke: results from a southern Swedish study.

Söderholm M, Almgren P, Jood K, Stanne TM, Olsson M, Ilinca A, Lorentzen E, Norrving B, Engström G, Melander O, Jern C, Lindgren A.

Eur J Neurol. 2016 Dec;23(12):1722-1728. doi: 10.1111/ene.13086. Epub 2016 Jul 29.

PMID:
27469034
11.

Low Circulating Acute Brain-Derived Neurotrophic Factor Levels Are Associated With Poor Long-Term Functional Outcome After Ischemic Stroke.

Stanne TM, Åberg ND, Nilsson S, Jood K, Blomstrand C, Andreasson U, Blennow K, Zetterberg H, Isgaard J, Svensson J, Jern C.

Stroke. 2016 Jul;47(7):1943-5. doi: 10.1161/STROKEAHA.115.012383. Epub 2016 Jun 14.

PMID:
27301948
12.

Serum erythropoietin and outcome after ischaemic stroke: a prospective study.

Åberg ND, Stanne TM, Jood K, Schiöler L, Blomstrand C, Andreasson U, Blennow K, Zetterberg H, Isgaard J, Jern C, Svensson J.

BMJ Open. 2016 Feb 25;6(2):e009827. doi: 10.1136/bmjopen-2015-009827.

13.

Genome-Wide Association Analysis of Young-Onset Stroke Identifies a Locus on Chromosome 10q25 Near HABP2.

Cheng YC, Stanne TM, Giese AK, Ho WK, Traylor M, Amouyel P, Holliday EG, Malik R, Xu H, Kittner SJ, Cole JW, O'Connell JR, Danesh J, Rasheed A, Zhao W, Engelter S, Grond-Ginsbach C, Kamatani Y, Lathrop M, Leys D, Thijs V, Metso TM, Tatlisumak T, Pezzini A, Parati EA, Norrving B, Bevan S, Rothwell PM, Sudlow C, Slowik A, Lindgren A, Walters MR; WTCCC-2 Consortium, Jannes J, Shen J, Crosslin D, Doheny K, Laurie CC, Kanse SM, Bis JC, Fornage M, Mosley TH, Hopewell JC, Strauch K, Müller-Nurasyid M, Gieger C, Waldenberger M, Peters A, Meisinger C, Ikram MA, Longstreth WT Jr, Meschia JF, Seshadri S, Sharma P, Worrall B, Jern C, Levi C, Dichgans M, Boncoraglio GB, Markus HS, Debette S, Rolfs A, Saleheen D, Mitchell BD.

Stroke. 2016 Feb;47(2):307-16. doi: 10.1161/STROKEAHA.115.011328. Epub 2016 Jan 5.

14.

Identification of the ISWI chromatin remodeling complex of the early branching eukaryote Trypanosoma brucei.

Stanne TM, Narayanan MS, Ridewood S, Ling A, Witmer K, Kushwaha M, Wiesler S, Wickstead B, Wood J, Rudenko G.

J Biol Chem. 2015 Dec 11;290(50):29760. doi: 10.1074/jbc.A115.679019. No abstract available.

15.

Identification of the ISWI Chromatin Remodeling Complex of the Early Branching Eukaryote Trypanosoma brucei.

Stanne TM, Narayanan MS, Ridewood S, Ling A, Witmer K, Kushwaha M, Wiesler S, Wickstead B, Wood J, Rudenko G.

J Biol Chem. 2015 Nov 6;290(45):26954-67. doi: 10.1074/jbc.M115.679019. Epub 2015 Sep 15. Erratum in: J Biol Chem. 2015 Dec 11;290(50):29760.

16.

Genetic variation at the BDNF locus: evidence for association with long-term outcome after ischemic stroke.

Stanne TM, Tjärnlund-Wolf A, Olsson S, Jood K, Blomstrand C, Jern C.

PLoS One. 2014 Dec 3;9(12):e114156. doi: 10.1371/journal.pone.0114156. eCollection 2014.

17.

Factor VII antigen levels are differentially associated to etiological subtypes of ischaemic stroke.

Stanne TM, Hanson E, Olsson S, Höglund J, Jood K, Blomstrand C, Jern C.

Thromb Haemost. 2013 Dec;110(6):1305-6. doi: 10.1160/TH13-07-0571. Epub 2013 Sep 19. No abstract available.

PMID:
24048512
18.

Genetic variation at the IGF1 locus shows association with post-stroke outcome and to circulating IGF1.

Aberg ND, Olsson S, Aberg D, Jood K, Stanne TM, Nilsson M, Blomstrand C, Svensson J, Isgaard J, Jern C.

Eur J Endocrinol. 2013 Oct 21;169(6):759-65. doi: 10.1530/EJE-13-0486. Print 2013 Dec.

PMID:
24005314
19.

TFPI gene variation and ischemic stroke.

Pedersen A, Hanson E, Olsson S, Stanne TM, Blomstrand C, Melander O, Lindgren A, Jood K, Jern C.

Thromb Res. 2012 Sep;130(3):565-7. doi: 10.1016/j.thromres.2012.06.011. Epub 2012 Jul 1. No abstract available.

PMID:
22749962
20.

TbISWI regulates multiple polymerase I (Pol I)-transcribed loci and is present at Pol II transcription boundaries in Trypanosoma brucei.

Stanne TM, Kushwaha M, Wand M, Taylor JE, Rudenko G.

Eukaryot Cell. 2011 Jul;10(7):964-76. doi: 10.1128/EC.05048-11. Epub 2011 May 13.

21.

NLP is a novel transcription regulator involved in VSG expression site control in Trypanosoma brucei.

Narayanan MS, Kushwaha M, Ersfeld K, Fullbrook A, Stanne TM, Rudenko G.

Nucleic Acids Res. 2011 Mar;39(6):2018-31. doi: 10.1093/nar/gkq950. Epub 2010 Nov 13.

22.

Active VSG expression sites in Trypanosoma brucei are depleted of nucleosomes.

Stanne TM, Rudenko G.

Eukaryot Cell. 2010 Jan;9(1):136-47. doi: 10.1128/EC.00281-09. Epub 2009 Nov 13.

23.

Structure and function of a novel type of ATP-dependent Clp protease.

Andersson FI, Tryggvesson A, Sharon M, Diemand AV, Classen M, Best C, Schmidt R, Schelin J, Stanne TM, Bukau B, Robinson CV, Witt S, Mogk A, Clarke AK.

J Biol Chem. 2009 May 15;284(20):13519-32. doi: 10.1074/jbc.M809588200. Epub 2009 Feb 23.

24.

Identification of new protein substrates for the chloroplast ATP-dependent Clp protease supports its constitutive role in Arabidopsis.

Stanne TM, Sjögren LL, Koussevitzky S, Clarke AK.

Biochem J. 2009 Jan 1;417(1):257-68. doi: 10.1042/BJ20081146.

PMID:
18754756
25.

Distinctive types of ATP-dependent Clp proteases in cyanobacteria.

Stanne TM, Pojidaeva E, Andersson FI, Clarke AK.

J Biol Chem. 2007 May 11;282(19):14394-402. Epub 2007 Mar 19.

26.

An Arabidopsis thaliana virescent mutant reveals a role for ClpR1 in plastid development.

Koussevitzky S, Stanne TM, Peto CA, Giap T, Sjögren LL, Zhao Y, Clarke AK, Chory J.

Plant Mol Biol. 2007 Jan;63(1):85-96. Epub 2006 Sep 29.

PMID:
17009084
27.

Structural and functional insights into the chloroplast ATP-dependent Clp protease in Arabidopsis.

Sjögren LL, Stanne TM, Zheng B, Sutinen S, Clarke AK.

Plant Cell. 2006 Oct;18(10):2635-49. Epub 2006 Sep 15.

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