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Items: 1 to 50 of 298

1.

Co-culture of a Novel Fermentative Bacterium, Lucifera butyrica gen. nov. sp. nov., With the Sulfur Reducer Desulfurella amilsii for Enhanced Sulfidogenesis.

Sánchez-Andrea I, Florentino AP, Semerel J, Strepis N, Sousa DZ, Stams AJM.

Front Microbiol. 2018 Dec 13;9:3108. doi: 10.3389/fmicb.2018.03108. eCollection 2018.

2.

Microbial Synthesis and Transformation of Inorganic and Organic Chlorine Compounds.

Atashgahi S, Liebensteiner MG, Janssen DB, Smidt H, Stams AJM, Sipkema D.

Front Microbiol. 2018 Dec 12;9:3079. doi: 10.3389/fmicb.2018.03079. eCollection 2018. Review.

3.

Metabolism and Occurrence of Methanogenic and Sulfate-Reducing Syntrophic Acetate Oxidizing Communities in Haloalkaline Environments.

Timmers PHA, Vavourakis CD, Kleerebezem R, Damsté JSS, Muyzer G, Stams AJM, Sorokin DY, Plugge CM.

Front Microbiol. 2018 Dec 10;9:3039. doi: 10.3389/fmicb.2018.03039. eCollection 2018.

4.

Trichococcus shcherbakoviae sp. nov., isolated from a laboratory-scale anaerobic EGSB bioreactor operated at low temperature.

Parshina SN, Strepis N, Aalvink S, Nozhevnikova AN, Stams AJM, Sousa DZ.

Int J Syst Evol Microbiol. 2019 Jan 3. doi: 10.1099/ijsem.0.003193. [Epub ahead of print]

PMID:
30605071
5.

Novel haloalkaliphilic methanotrophic bacteria: An attempt for enhancing methane bio-refinery.

Cantera S, Sánchez-Andrea I, Sadornil LJ, García-Encina PA, Stams AJM, Muñoz R.

J Environ Manage. 2019 Feb 1;231:1091-1099. doi: 10.1016/j.jenvman.2018.11.017. Epub 2018 Nov 14.

PMID:
30602233
6.

Inhibition Studies with 2-Bromoethanesulfonate Reveal a Novel Syntrophic Relationship in Anaerobic Oleate Degradation.

Salvador AF, Cavaleiro AJ, Paulo AMS, Silva SA, Guedes AP, Pereira MA, Stams AJM, Sousa DZ, Alves MM.

Appl Environ Microbiol. 2019 Jan 9;85(2). pii: e01733-18. doi: 10.1128/AEM.01733-18. Print 2019 Jan 15.

7.

Insight into the sulfur metabolism of Desulfurella amilsii by differential proteomics.

Florentino AP, Pereira IAC, Boeren S, van den Born M, Stams AJM, Sánchez-Andrea I.

Environ Microbiol. 2019 Jan;21(1):209-225. doi: 10.1111/1462-2920.14442. Epub 2018 Nov 15.

PMID:
30307104
8.

Eubacterium maltosivorans sp. nov., a novel human intestinal acetogenic and butyrogenic bacterium with a versatile metabolism.

Feng Y, Stams AJM, Sánchez-Andrea I, de Vos WM.

Int J Syst Evol Microbiol. 2018 Oct 4. doi: 10.1099/ijsem.0.003028. [Epub ahead of print]

PMID:
30285910
9.

Novel energy conservation strategies and behaviour of Pelotomaculum schinkii driving syntrophic propionate catabolism.

Hidalgo-Ahumada CAP, Nobu MK, Narihiro T, Tamaki H, Liu WT, Kamagata Y, Stams AJM, Imachi H, Sousa DZ.

Environ Microbiol. 2018 Dec;20(12):4503-4511. doi: 10.1111/1462-2920.14388. Epub 2018 Oct 30.

PMID:
30126076
10.

Multi-production of high added market value metabolites from diluted methane emissions via methanotrophic extremophiles.

Cantera S, Sánchez-Andrea I, Lebrero R, García-Encina PA, Stams AJM, Muñoz R.

Bioresour Technol. 2018 Nov;267:401-407. doi: 10.1016/j.biortech.2018.07.057. Epub 2018 Jul 20.

PMID:
30031279
11.

Prospects for harnessing biocide resistance for bioremediation and detoxification.

Atashgahi S, Sánchez-Andrea I, Heipieper HJ, van der Meer JR, Stams AJM, Smidt H.

Science. 2018 May 18;360(6390):743-746. doi: 10.1126/science.aar3778. Review.

PMID:
29773745
12.

Insight into the Role of Facultative Bacteria Stimulated by Microaeration in Continuous Bioreactors Converting LCFA to Methane.

Duarte MS, Silva SA, Salvador AF, Cavaleiro AJ, Stams AJM, Alves MM, Pereira MA.

Environ Sci Technol. 2018 Jun 5;52(11):6497-6507. doi: 10.1021/acs.est.8b00894. Epub 2018 May 24.

PMID:
29763542
13.

Comparative proteome analysis of propionate degradation by Syntrophobacter fumaroxidans in pure culture and in coculture with methanogens.

Sedano-Núñez VT, Boeren S, Stams AJM, Plugge CM.

Environ Microbiol. 2018 May;20(5):1842-1856. doi: 10.1111/1462-2920.14119. Epub 2018 Apr 23.

14.

A benzene-degrading nitrate-reducing microbial consortium displays aerobic and anaerobic benzene degradation pathways.

Atashgahi S, Hornung B, van der Waals MJ, da Rocha UN, Hugenholtz F, Nijsse B, Molenaar D, van Spanning R, Stams AJM, Gerritse J, Smidt H.

Sci Rep. 2018 Mar 14;8(1):4490. doi: 10.1038/s41598-018-22617-x.

15.

High Rate Biomethanation of Carbon Monoxide-Rich Gases via a Thermophilic Synthetic Coculture.

Diender M, Uhl PS, Bitter JH, Stams AJM, Sousa DZ.

ACS Sustain Chem Eng. 2018 Feb 5;6(2):2169-2176. doi: 10.1021/acssuschemeng.7b03601. Epub 2017 Dec 11.

16.

Organic acid production from potato starch waste fermentation by rumen microbial communities from Dutch and Thai dairy cows.

Palakawong Na Ayudthaya S, van de Weijer AHP, van Gelder AH, Stams AJM, de Vos WM, Plugge CM.

Biotechnol Biofuels. 2018 Jan 25;11:13. doi: 10.1186/s13068-018-1012-4. eCollection 2018.

17.

The deep-subsurface sulfate reducer Desulfotomaculum kuznetsovii employs two methanol-degrading pathways.

Sousa DZ, Visser M, van Gelder AH, Boeren S, Pieterse MM, Pinkse MWH, Verhaert PDEM, Vogt C, Franke S, Kümmel S, Stams AJM.

Nat Commun. 2018 Jan 16;9(1):239. doi: 10.1038/s41467-017-02518-9.

18.

Enhancement of methane production from 1-hexadecene by additional electron donors.

Paulo AMS, Salvador AF, Alves JI, Castro R, Langenhoff AAM, Stams AJM, Cavaleiro AJ.

Microb Biotechnol. 2018 Jul;11(4):657-666. doi: 10.1111/1751-7915.12886. Epub 2017 Dec 7.

19.

Bacterial glycerol oxidation coupled to sulfate reduction at neutral and acidic pH.

Santos SC, Liebensteiner MG, van Gelder AH, Dimitrov MR, Almeida PF, Quintella CM, Stams AJM, Sánchez-Andrea I.

J Gen Appl Microbiol. 2018 Mar 27;64(1):1-8. doi: 10.2323/jgam.2017.02.009. Epub 2017 Nov 29.

20.

Enrichment of syngas-converting communities from a multi-orifice baffled bioreactor.

Arantes AL, Alves JI, Stams AJM, Alves MM, Sousa DZ.

Microb Biotechnol. 2018 Jul;11(4):639-646. doi: 10.1111/1751-7915.12864. Epub 2017 Nov 21.

21.

Effect of Nickel and Cobalt on Methanogenic Enrichment Cultures and Role of Biogenic Sulfide in Metal Toxicity Attenuation.

Paulo LM, Ramiro-Garcia J, van Mourik S, Stams AJM, Sousa DZ.

Front Microbiol. 2017 Jul 18;8:1341. doi: 10.3389/fmicb.2017.01341. eCollection 2017.

22.

Evaluation and optimization of PCR primers for selective and quantitative detection of marine ANME subclusters involved in sulfate-dependent anaerobic methane oxidation.

Timmers PHA, Widjaja-Greefkes HCA, Plugge CM, Stams AJM.

Appl Microbiol Biotechnol. 2017 Jul;101(14):5847-5859. doi: 10.1007/s00253-017-8338-x. Epub 2017 Jun 15.

23.

Biofilm formation and granule properties in anaerobic digestion at high salinity.

Gagliano MC, Ismail SB, Stams AJM, Plugge CM, Temmink H, Van Lier JB.

Water Res. 2017 Sep 15;121:61-71. doi: 10.1016/j.watres.2017.05.016. Epub 2017 May 10.

24.

Carbon nanotubes accelerate methane production in pure cultures of methanogens and in a syntrophic coculture.

Salvador AF, Martins G, Melle-Franco M, Serpa R, Stams AJM, Cavaleiro AJ, Pereira MA, Alves MM.

Environ Microbiol. 2017 Jul;19(7):2727-2739. doi: 10.1111/1462-2920.13774. Epub 2017 Jun 22.

PMID:
28447396
25.

Concurrent Haloalkanoate Degradation and Chlorate Reduction by Pseudomonas chloritidismutans AW-1T.

Peng P, Zheng Y, Koehorst JJ, Schaap PJ, Stams AJM, Smidt H, Atashgahi S.

Appl Environ Microbiol. 2017 May 31;83(12). pii: e00325-17. doi: 10.1128/AEM.00325-17. Print 2017 Jun 15.

26.

Sodium lauryl ether sulfate (SLES) degradation by nitrate-reducing bacteria.

Paulo AMS, Aydin R, Dimitrov MR, Vreeling H, Cavaleiro AJ, García-Encina PA, Stams AJM, Plugge CM.

Appl Microbiol Biotechnol. 2017 Jun;101(12):5163-5173. doi: 10.1007/s00253-017-8212-x. Epub 2017 Mar 15.

27.

Genome Sequence of Desulfurella amilsii Strain TR1 and Comparative Genomics of Desulfurellaceae Family.

Florentino AP, Stams AJ, Sánchez-Andrea I.

Front Microbiol. 2017 Feb 20;8:222. doi: 10.3389/fmicb.2017.00222. eCollection 2017.

28.

Enrichment of sulfidogenic bacteria from the human intestinal tract.

Feng Y, Stams AJM, de Vos WM, Sánchez-Andrea I.

FEMS Microbiol Lett. 2017 Feb 1;364(4). doi: 10.1093/femsle/fnx028.

PMID:
28158432
29.

Reverse Methanogenesis and Respiration in Methanotrophic Archaea.

Timmers PH, Welte CU, Koehorst JJ, Plugge CM, Jetten MS, Stams AJ.

Archaea. 2017 Jan 5;2017:1654237. doi: 10.1155/2017/1654237. eCollection 2017. Review.

30.

Microbial selenium sulfide reduction for selenium recovery from wastewater.

Hageman SP, van der Weijden RD, Stams AJ, van Cappellen P, Buisman CJ.

J Hazard Mater. 2017 May 5;329:110-119. doi: 10.1016/j.jhazmat.2016.12.061. Epub 2016 Dec 31.

PMID:
28131038
31.

Thiosulfate Conversion to Sulfide by a Haloalkaliphilic Microbial Community in a Bioreactor Fed with H2 Gas.

Sousa JA, Bijmans MF, Stams AJ, Plugge CM.

Environ Sci Technol. 2017 Jan 17;51(2):914-923. doi: 10.1021/acs.est.6b04497. Epub 2017 Jan 6.

PMID:
27997142
32.

Effect of humic acid on anaerobic digestion of cellulose and xylan in completely stirred tank reactors: inhibitory effect, mitigation of the inhibition and the dynamics of the microbial communities.

Azman S, Khadem AF, Plugge CM, Stams AJ, Bec S, Zeeman G.

Appl Microbiol Biotechnol. 2017 Jan;101(2):889-901. doi: 10.1007/s00253-016-8010-x. Epub 2016 Nov 29.

33.

Comparative Analysis of Carbon Monoxide Tolerance among Thermoanaerobacter Species.

Alves JI, Alves MM, Plugge CM, Stams AJ, Sousa DZ.

Front Microbiol. 2016 Aug 29;7:1330. doi: 10.3389/fmicb.2016.01330. eCollection 2016.

34.

Actinomyces succiniciruminis sp. nov. and Actinomyces glycerinitolerans sp. nov., two novel organic acid-producing bacteria isolated from rumen.

Palakawong N A S, Pristaš P, Hrehová L, Javorský P, Stams AJ, Plugge CM.

Syst Appl Microbiol. 2016 Oct;39(7):445-452. doi: 10.1016/j.syapm.2016.08.001. Epub 2016 Aug 24.

35.

Proteomic Analysis of the Hydrogen and Carbon Monoxide Metabolism of Methanothermobacter marburgensis.

Diender M, Pereira R, Wessels HJ, Stams AJ, Sousa DZ.

Front Microbiol. 2016 Jul 4;7:1049. doi: 10.3389/fmicb.2016.01049. eCollection 2016.

36.

Description of Trichococcus ilyis sp. nov. by combined physiological and in silico genome hybridization analyses.

Strepis N, Sánchez-Andrea I, van Gelder AH, van Kruistum H, Shapiro N, Kyrpides N, Göker M, Klenk HP, Schaap P, Stams AJ, Sousa DZ.

Int J Syst Evol Microbiol. 2016 Oct;66(10):3957-3963. doi: 10.1099/ijsem.0.001294. Epub 2016 Jul 11.

PMID:
27406836
37.

Toxicity of long chain fatty acids towards acetate conversion by Methanosaeta concilii and Methanosarcina mazei.

Silva SA, Salvador AF, Cavaleiro AJ, Pereira MA, Stams AJ, Alves MM, Sousa DZ.

Microb Biotechnol. 2016 Jul;9(4):514-8. doi: 10.1111/1751-7915.12365. Epub 2016 Jun 8.

38.

A case in support of implementing innovative bio-processes in the metal mining industry.

Sánchez-Andrea I, Stams AJ, Weijma J, Gonzalez Contreras P, Dijkman H, Rozendal RA, Johnson DB.

FEMS Microbiol Lett. 2016 Jun;363(11). pii: fnw106. doi: 10.1093/femsle/fnw106. Epub 2016 Apr 18.

PMID:
27190293
39.

Production of medium-chain fatty acids and higher alcohols by a synthetic co-culture grown on carbon monoxide or syngas.

Diender M, Stams AJ, Sousa DZ.

Biotechnol Biofuels. 2016 Apr 2;9:82. doi: 10.1186/s13068-016-0495-0. eCollection 2016.

40.

Conversion of Cn-Unsaturated into Cn-2-Saturated LCFA Can Occur Uncoupled from Methanogenesis in Anaerobic Bioreactors.

Cavaleiro AJ, Pereira MA, Guedes AP, Stams AJ, Alves MM, Sousa DZ.

Environ Sci Technol. 2016 Mar 15;50(6):3082-90. doi: 10.1021/acs.est.5b03204. Epub 2016 Feb 25.

PMID:
26810160
41.

Desulfurella amilsii sp. nov., a novel acidotolerant sulfur-respiring bacterium isolated from acidic river sediments.

Florentino AP, Brienza C, Stams AJM, Sánchez-Andrea I.

Int J Syst Evol Microbiol. 2016 Mar;66(3):1249-1253. doi: 10.1099/ijsem.0.000866. Epub 2015 Dec 23.

PMID:
26704766
42.

Anaerobic oxidation of methane associated with sulfate reduction in a natural freshwater gas source.

Timmers PH, Suarez-Zuluaga DA, van Rossem M, Diender M, Stams AJ, Plugge CM.

ISME J. 2016 Jun;10(6):1400-12. doi: 10.1038/ismej.2015.213. Epub 2015 Dec 4.

43.

Pathways and Bioenergetics of Anaerobic Carbon Monoxide Fermentation.

Diender M, Stams AJ, Sousa DZ.

Front Microbiol. 2015 Nov 19;6:1275. doi: 10.3389/fmicb.2015.01275. eCollection 2015. Review.

44.

Lachnotalea glycerini gen. nov., sp. nov., an anaerobe isolated from a nanofiltration unit treating anoxic groundwater.

Jarzembowska M, Sousa DZ, Beyer F, Zwijnenburg A, Plugge CM, Stams AJM.

Int J Syst Evol Microbiol. 2016 Feb;66(2):774-779. doi: 10.1099/ijsem.0.000791. Epub 2015 Nov 24.

PMID:
26612136
45.

Phylogenetic comparison of Desulfotomaculum species of subgroup 1a and description of Desulfotomaculum reducens sp. nov.

Visser M, Stams AJM, Frutschi M, Bernier-Latmani R.

Int J Syst Evol Microbiol. 2016 Feb;66(2):762-767. doi: 10.1099/ijsem.0.000786. Epub 2015 Nov 23.

PMID:
26597812
46.

Carboxydotrophic growth of Geobacter sulfurreducens.

Geelhoed JS, Henstra AM, Stams AJ.

Appl Microbiol Biotechnol. 2016 Jan;100(2):997-1007. doi: 10.1007/s00253-015-7033-z. Epub 2015 Oct 19.

47.

Growth and activity of ANME clades with different sulfate and sulfide concentrations in the presence of methane.

Timmers PH, Widjaja-Greefkes HC, Ramiro-Garcia J, Plugge CM, Stams AJ.

Front Microbiol. 2015 Sep 22;6:988. doi: 10.3389/fmicb.2015.00988. eCollection 2015.

48.

Thiosulphate conversion in a methane and acetate fed membrane bioreactor.

Suarez-Zuluaga DA, Timmers PH, Plugge CM, Stams AJ, Buisman CJ, Weijma J.

Environ Sci Pollut Res Int. 2016 Feb;23(3):2467-78. doi: 10.1007/s11356-015-5344-3. Epub 2015 Oct 1.

49.

Ecology and application of haloalkaliphilic anaerobic microbial communities.

Sousa JA, Sorokin DY, Bijmans MF, Plugge CM, Stams AJ.

Appl Microbiol Biotechnol. 2015 Nov;99(22):9331-6. doi: 10.1007/s00253-015-6937-y. Epub 2015 Sep 10. Review.

50.

Sulfur Reduction in Acid Rock Drainage Environments.

Florentino AP, Weijma J, Stams AJ, Sánchez-Andrea I.

Environ Sci Technol. 2015 Oct 6;49(19):11746-55. doi: 10.1021/acs.est.5b03346. Epub 2015 Sep 23.

PMID:
26356416

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