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Items: 1 to 50 of 286

1.

Disruption of the pancreatic vasculature in zebrafish affects islet architecture and function.

Mullapudi ST, Boezio GLM, Rossi A, Marass M, Matsuoka RL, Matsuda H, Helker CSM, Yang YHC, Stainier DYR.

Development. 2019 Oct 9. pii: dev.173674. doi: 10.1242/dev.173674. [Epub ahead of print]

PMID:
31597659
2.

Mechanical Forces Regulate Cardiomyocyte Myofilament Maturation via the VCL-SSH1-CFL Axis.

Fukuda R, Gunawan F, Ramadass R, Beisaw A, Konzer A, Mullapudi ST, Gentile A, Maischein HM, Graumann J, Stainier DYR.

Dev Cell. 2019 Oct 7;51(1):62-77.e5. doi: 10.1016/j.devcel.2019.08.006. Epub 2019 Sep 5.

PMID:
31495694
3.

Induction of interferon-stimulated genes and cellular stress pathways by morpholinos in zebrafish.

Lai JKH, Gagalova KK, Kuenne C, El-Brolosy MA, Stainier DYR.

Dev Biol. 2019 Oct 1;454(1):21-28. doi: 10.1016/j.ydbio.2019.06.008. Epub 2019 Jun 12.

PMID:
31201802
4.

A whole organism small molecule screen identifies novel regulators of pancreatic endocrine development.

Helker CSM, Mullapudi ST, Mueller LM, Preussner J, Tunaru S, Skog O, Kwon HB, Kreuder F, Lancman JJ, Bonnavion R, Dong PDS, Looso M, Offermanns S, Korsgren O, Spagnoli FM, Stainier DYR.

Development. 2019 Jul 24;146(14). pii: dev172569. doi: 10.1242/dev.172569.

PMID:
31142539
5.

Paraxial Mesoderm Is the Major Source of Lymphatic Endothelium.

Stone OA, Stainier DYR.

Dev Cell. 2019 Jul 22;50(2):247-255.e3. doi: 10.1016/j.devcel.2019.04.034. Epub 2019 May 23.

6.

Genome-wide strategies reveal target genes of Npas4l associated with vascular development in zebrafish.

Marass M, Beisaw A, Gerri C, Luzzani F, Fukuda N, Günther S, Kuenne C, Reischauer S, Stainier DYR.

Development. 2019 Jun 3;146(11). pii: dev173427. doi: 10.1242/dev.173427.

PMID:
31097478
7.

The transmembrane protein Crb2a regulates cardiomyocyte apicobasal polarity and adhesion in zebrafish.

Jiménez-Amilburu V, Stainier DYR.

Development. 2019 May 7;146(9). pii: dev171207. doi: 10.1242/dev.171207.

PMID:
30992276
8.

Genetic compensation triggered by mutant mRNA degradation.

El-Brolosy MA, Kontarakis Z, Rossi A, Kuenne C, Günther S, Fukuda N, Kikhi K, Boezio GLM, Takacs CM, Lai SL, Fukuda R, Gerri C, Giraldez AJ, Stainier DYR.

Nature. 2019 Apr;568(7751):193-197. doi: 10.1038/s41586-019-1064-z. Epub 2019 Apr 3.

9.

Correction: Loss of the Mia40a oxidoreductase leads to hepato-pancreatic insufficiency in zebrafish.

Sokol AM, Uszczynska-Ratajczak B, Collins MM, Bazala M, Topf U, Lundegaard PR, Sugunan S, Guenther S, Kuenne C, Graumann J, Chan SSL, Stainier DYR, Chacinska A.

PLoS Genet. 2019 Jan 31;15(1):e1007972. doi: 10.1371/journal.pgen.1007972. eCollection 2019 Jan.

10.

Peri-arterial specification of vascular mural cells from naïve mesenchyme requires Notch signaling.

Ando K, Wang W, Peng D, Chiba A, Lagendijk AK, Barske L, Crump JG, Stainier DYR, Lendahl U, Koltowska K, Hogan BM, Fukuhara S, Mochizuki N, Betsholtz C.

Development. 2019 Jan 25;146(2). pii: dev165589. doi: 10.1242/dev.165589.

11.

Focal adhesions are essential to drive zebrafish heart valve morphogenesis.

Gunawan F, Gentile A, Fukuda R, Tsedeke AT, Jiménez-Amilburu V, Ramadass R, Iida A, Sehara-Fujisawa A, Stainier DYR.

J Cell Biol. 2019 Mar 4;218(3):1039-1054. doi: 10.1083/jcb.201807175. Epub 2019 Jan 11.

12.

The flow responsive transcription factor Klf2 is required for myocardial wall integrity by modulating Fgf signaling.

Rasouli SJ, El-Brolosy M, Tsedeke AT, Bensimon-Brito A, Ghanbari P, Maischein HM, Kuenne C, Stainier DY.

Elife. 2018 Dec 28;7. pii: e38889. doi: 10.7554/eLife.38889.

13.

Immune responses in cardiac repair and regeneration: a comparative point of view.

Lai SL, Marín-Juez R, Stainier DYR.

Cell Mol Life Sci. 2019 Apr;76(7):1365-1380. doi: 10.1007/s00018-018-2995-5. Epub 2018 Dec 21. Review.

14.

Fibrillin-2 is a key mediator of smooth muscle extracellular matrix homeostasis during mouse tracheal tubulogenesis.

Yin W, Kim HT, Wang S, Gunawan F, Li R, Buettner C, Grohmann B, Sengle G, Sinner D, Offermanns S, Stainier DYR.

Eur Respir J. 2019 Mar 7;53(3). pii: 1800840. doi: 10.1183/13993003.00840-2018. Print 2019 Mar.

PMID:
30578393
15.

Screening for insulin-independent pathways that modulate glucose homeostasis identifies androgen receptor antagonists.

Mullapudi ST, Helker CS, Boezio GL, Maischein HM, Sokol AM, Guenther S, Matsuda H, Kubicek S, Graumann J, Yang YHC, Stainier DY.

Elife. 2018 Dec 6;7. pii: e42209. doi: 10.7554/eLife.42209.

16.

Loss of the Mia40a oxidoreductase leads to hepato-pancreatic insufficiency in zebrafish.

Sokol AM, Uszczynska-Ratajczak B, Collins MM, Bazala M, Topf U, Lundegaard PR, Sugunan S, Guenther S, Kuenne C, Graumann J, Chan SSL, Stainier DYR, Chacinska A.

PLoS Genet. 2018 Nov 20;14(11):e1007743. doi: 10.1371/journal.pgen.1007743. eCollection 2018 Nov. Erratum in: PLoS Genet. 2019 Jan 31;15(1):e1007972.

17.

Pituicyte Cues Regulate the Development of Permeable Neuro-Vascular Interfaces.

Anbalagan S, Gordon L, Blechman J, Matsuoka RL, Rajamannar P, Wircer E, Biran J, Reuveny A, Leshkowitz D, Stainier DYR, Levkowitz G.

Dev Cell. 2018 Dec 17;47(6):711-726.e5. doi: 10.1016/j.devcel.2018.10.017. Epub 2018 Nov 15.

PMID:
30449506
18.

Conditional mutagenesis by oligonucleotide-mediated integration of loxP sites in zebrafish.

Burg L, Palmer N, Kikhi K, Miroshnik ES, Rueckert H, Gaddy E, MacPherson Cunningham C, Mattonet K, Lai SL, Marín-Juez R, Waring RB, Stainier DYR, Balciunas D.

PLoS Genet. 2018 Nov 14;14(11):e1007754. doi: 10.1371/journal.pgen.1007754. eCollection 2018 Nov.

19.

Myh10 deficiency leads to defective extracellular matrix remodeling and pulmonary disease.

Kim HT, Yin W, Jin YJ, Panza P, Gunawan F, Grohmann B, Buettner C, Sokol AM, Preussner J, Guenther S, Kostin S, Ruppert C, Bhagwat AM, Ma X, Graumann J, Looso M, Guenther A, Adelstein RS, Offermanns S, Stainier DYR.

Nat Commun. 2018 Nov 2;9(1):4600. doi: 10.1038/s41467-018-06833-7.

20.

Cyclopropane Modification of Trehalose Dimycolate Drives Granuloma Angiogenesis and Mycobacterial Growth through Vegf Signaling.

Walton EM, Cronan MR, Cambier CJ, Rossi A, Marass M, Foglia MD, Brewer WJ, Poss KD, Stainier DYR, Bertozzi CR, Tobin DM.

Cell Host Microbe. 2018 Oct 10;24(4):514-525.e6. doi: 10.1016/j.chom.2018.09.004.

21.

Loss of pyruvate kinase M2 limits growth and triggers innate immune signaling in endothelial cells.

Stone OA, El-Brolosy M, Wilhelm K, Liu X, Romão AM, Grillo E, Lai JKH, Günther S, Jeratsch S, Kuenne C, Lee IC, Braun T, Santoro MM, Locasale JW, Potente M, Stainier DYR.

Nat Commun. 2018 Oct 9;9(1):4077. doi: 10.1038/s41467-018-06406-8.

22.

Use of three-dimensional organoids and lung-on-a-chip methods to study lung development, regeneration and disease.

Gkatzis K, Taghizadeh S, Huh D, Stainier DYR, Bellusci S.

Eur Respir J. 2018 Nov 29;52(5). pii: 1800876. doi: 10.1183/13993003.00876-2018. Print 2018 Nov. Review.

PMID:
30262579
23.

Characterization of zebrafish (Danio rerio) muscle ankyrin repeat proteins reveals their conserved response to endurance exercise.

Boskovic S, Marín-Juez R, Jasnic J, Reischauer S, El Sammak H, Kojic A, Faulkner G, Radojkovic D, Stainier DYR, Kojic S.

PLoS One. 2018 Sep 25;13(9):e0204312. doi: 10.1371/journal.pone.0204312. eCollection 2018.

24.

Whole-Organism Chemical Screening Identifies Modulators of Pancreatic β-Cell Function.

Matsuda H, Mullapudi ST, Yang YHC, Masaki H, Hesselson D, Stainier DYR.

Diabetes. 2018 Nov;67(11):2268-2279. doi: 10.2337/db17-1223. Epub 2018 Aug 16.

25.

In vivo analysis of cardiomyocyte proliferation during trabeculation.

Uribe V, Ramadass R, Dogra D, Rasouli SJ, Gunawan F, Nakajima H, Chiba A, Reischauer S, Mochizuki N, Stainier DYR.

Development. 2018 Jul 30;145(14). pii: dev164194. doi: 10.1242/dev.164194.

26.

A molecular mechanism for Wnt ligand-specific signaling.

Eubelen M, Bostaille N, Cabochette P, Gauquier A, Tebabi P, Dumitru AC, Koehler M, Gut P, Alsteens D, Stainier DYR, Garcia-Pino A, Vanhollebeke B.

Science. 2018 Aug 17;361(6403). pii: eaat1178. doi: 10.1126/science.aat1178. Epub 2018 Jul 19.

PMID:
30026314
27.

The potassium channel KCNJ13 is essential for smooth muscle cytoskeletal organization during mouse tracheal tubulogenesis.

Yin W, Kim HT, Wang S, Gunawan F, Wang L, Kishimoto K, Zhong H, Roman D, Preussner J, Guenther S, Graef V, Buettner C, Grohmann B, Looso M, Morimoto M, Mardon G, Offermanns S, Stainier DYR.

Nat Commun. 2018 Jul 19;9(1):2815. doi: 10.1038/s41467-018-05043-5.

28.

HHEX is a transcriptional regulator of the VEGFC/FLT4/PROX1 signaling axis during vascular development.

Gauvrit S, Villasenor A, Strilic B, Kitchen P, Collins MM, Marín-Juez R, Guenther S, Maischein HM, Fukuda N, Canham MA, Brickman JM, Bogue CW, Jayaraman PS, Stainier DYR.

Nat Commun. 2018 Jul 13;9(1):2704. doi: 10.1038/s41467-018-05039-1.

29.

Zebrafish mutants and TEAD reporters reveal essential functions for Yap and Taz in posterior cardinal vein development.

Astone M, Lai JKH, Dupont S, Stainier DYR, Argenton F, Vettori A.

Sci Rep. 2018 Jul 5;8(1):10189. doi: 10.1038/s41598-018-27657-x.

30.

Pitx2c orchestrates embryonic axis extension via mesendodermal cell migration.

Collins MM, Maischein HM, Dufourcq P, Charpentier M, Blader P, Stainier DY.

Elife. 2018 Jun 28;7. pii: e34880. doi: 10.7554/eLife.34880.

31.

A new mode of pancreatic islet innervation revealed by live imaging in zebrafish.

Yang YHC, Kawakami K, Stainier DY.

Elife. 2018 Jun 19;7. pii: e34519. doi: 10.7554/eLife.34519.

32.

The Hippo pathway effector Wwtr1 regulates cardiac wall maturation in zebrafish.

Lai JKH, Collins MM, Uribe V, Jiménez-Amilburu V, Günther S, Maischein HM, Stainier DYR.

Development. 2018 May 17;145(10). pii: dev159210. doi: 10.1242/dev.159210.

33.

Distinct myocardial lineages break atrial symmetry during cardiogenesis in zebrafish.

Guerra A, Germano RF, Stone O, Arnaout R, Guenther S, Ahuja S, Uribe V, Vanhollebeke B, Stainier DY, Reischauer S.

Elife. 2018 May 15;7. pii: e32833. doi: 10.7554/eLife.32833.

34.

Corrigendum: Cloche is a bHLH-PAS transcription factor that drives haemato-vascular specification.

Reischauer S, Stone OA, Villasenor A, Chi N, Jin SW, Martin M, Lee MT, Fukuda N, Marass M, Witty A, Fiddes I, Kuo T, Chung WS, Salek S, Lerrigo R, Alsiö J, Luo S, Tworus D, Augustine SM, Mucenieks S, Nystedt B, Giraldez AJ, Schroth GP, Andersson O, Stainier DYR.

Nature. 2018 Mar 21;555(7697):543. doi: 10.1038/nature25991.

PMID:
29565360
35.

Mir-126 is a conserved modulator of lymphatic development.

Kontarakis Z, Rossi A, Ramas S, Dellinger MT, Stainier DYR.

Dev Biol. 2018 May 15;437(2):120-130. doi: 10.1016/j.ydbio.2018.03.006. Epub 2018 Mar 15.

36.

Recent insights into vascular development from studies in zebrafish.

Matsuoka RL, Stainier DYR.

Curr Opin Hematol. 2018 May;25(3):204-211. doi: 10.1097/MOH.0000000000000420. Review.

PMID:
29438257
37.

Hif-1α and Hif-2α regulate hemogenic endothelium and hematopoietic stem cell formation in zebrafish.

Gerri C, Marass M, Rossi A, Stainier DYR.

Blood. 2018 Mar 1;131(9):963-973. doi: 10.1182/blood-2017-07-797795. Epub 2018 Jan 16.

PMID:
29339404
38.

Regulation of posterior body and epidermal morphogenesis in zebrafish by localized Yap1 and Wwtr1.

Kimelman D, Smith NL, Lai JKH, Stainier DY.

Elife. 2017 Dec 28;6. pii: e31065. doi: 10.7554/eLife.31065.

39.

Wnt/β-catenin signaling controls intrahepatic biliary network formation in zebrafish by regulating notch activity.

So J, Khaliq M, Evason K, Ninov N, Martin BL, Stainier DYR, Shin D.

Hepatology. 2018 Jun;67(6):2352-2366. doi: 10.1002/hep.29752. Epub 2018 Apr 19.

40.

Opposite effects of Activin type 2 receptor ligands on cardiomyocyte proliferation during development and repair.

Dogra D, Ahuja S, Kim HT, Rasouli SJ, Stainier DYR, Reischauer S.

Nat Commun. 2017 Dec 1;8(1):1902. doi: 10.1038/s41467-017-01950-1.

41.

Transient cardiomyocyte fusion regulates cardiac development in zebrafish.

Sawamiphak S, Kontarakis Z, Filosa A, Reischauer S, Stainier DYR.

Nat Commun. 2017 Nov 15;8(1):1525. doi: 10.1038/s41467-017-01555-8.

42.

Guidelines for morpholino use in zebrafish.

Stainier DYR, Raz E, Lawson ND, Ekker SC, Burdine RD, Eisen JS, Ingham PW, Schulte-Merker S, Yelon D, Weinstein BM, Mullins MC, Wilson SW, Ramakrishnan L, Amacher SL, Neuhauss SCF, Meng A, Mochizuki N, Panula P, Moens CB.

PLoS Genet. 2017 Oct 19;13(10):e1007000. doi: 10.1371/journal.pgen.1007000. eCollection 2017 Oct. No abstract available.

43.

CNS-resident progenitors direct the vascularization of neighboring tissues.

Matsuoka RL, Rossi A, Stone OA, Stainier DYR.

Proc Natl Acad Sci U S A. 2017 Sep 19;114(38):10137-10142. doi: 10.1073/pnas.1619300114. Epub 2017 Aug 30.

44.

Genetic compensation: A phenomenon in search of mechanisms.

El-Brolosy MA, Stainier DYR.

PLoS Genet. 2017 Jul 13;13(7):e1006780. doi: 10.1371/journal.pgen.1006780. eCollection 2017 Jul. Review.

45.

Thyroid Hormone Coordinates Pancreatic Islet Maturation During the Zebrafish Larval-to-Juvenile Transition to Maintain Glucose Homeostasis.

Matsuda H, Mullapudi ST, Zhang Y, Hesselson D, Stainier DYR.

Diabetes. 2017 Oct;66(10):2623-2635. doi: 10.2337/db16-1476. Epub 2017 Jul 11.

46.

Sheath Cell Invasion and Trans-differentiation Repair Mechanical Damage Caused by Loss of Caveolae in the Zebrafish Notochord.

Garcia J, Bagwell J, Njaine B, Norman J, Levic DS, Wopat S, Miller SE, Liu X, Locasale JW, Stainier DYR, Bagnat M.

Curr Biol. 2017 Jul 10;27(13):1982-1989.e3. doi: 10.1016/j.cub.2017.05.035. Epub 2017 Jun 22.

47.

Reciprocal analyses in zebrafish and medaka reveal that harnessing the immune response promotes cardiac regeneration.

Lai SL, Marín-Juez R, Moura PL, Kuenne C, Lai JKH, Tsedeke AT, Guenther S, Looso M, Stainier DY.

Elife. 2017 Jun 20;6. pii: e25605. doi: 10.7554/eLife.25605.

48.

Bone morphogenetic protein signaling governs biliary-driven liver regeneration in zebrafish through tbx2b and id2a.

Choi TY, Khaliq M, Tsurusaki S, Ninov N, Stainier DYR, Tanaka M, Shin D.

Hepatology. 2017 Nov;66(5):1616-1630. doi: 10.1002/hep.29309. Epub 2017 Sep 29.

49.

The zebrafish ventricle: A hub of cardiac endothelial cells for in vitro cell behavior studies.

Patra C, Kontarakis Z, Kaur H, Rayrikar A, Mukherjee D, Stainier DYR.

Sci Rep. 2017 Jun 2;7(1):2687. doi: 10.1038/s41598-017-02461-1.

50.

Frameshift indels introduced by genome editing can lead to in-frame exon skipping.

Lalonde S, Stone OA, Lessard S, Lavertu A, Desjardins J, Beaudoin M, Rivas M, Stainier DYR, Lettre G.

PLoS One. 2017 Jun 1;12(6):e0178700. doi: 10.1371/journal.pone.0178700. eCollection 2017.

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