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Items: 13

1.

High mutation rates limit evolutionary adaptation in Escherichia coli.

Sprouffske K, Aguilar-Rodríguez J, Sniegowski P, Wagner A.

PLoS Genet. 2018 Apr 27;14(4):e1007324. doi: 10.1371/journal.pgen.1007324. eCollection 2018 Apr.

2.

Assessing the benefits of horizontal gene transfer by laboratory evolution and genome sequencing.

Chu HY, Sprouffske K, Wagner A.

BMC Evol Biol. 2018 Apr 19;18(1):54. doi: 10.1186/s12862-018-1164-7.

3.

Effect of Population Size and Mutation Rate on the Evolution of RNA Sequences on an Adaptive Landscape Determined by RNA Folding.

Vahdati AR, Sprouffske K, Wagner A.

Int J Biol Sci. 2017 Sep 5;13(9):1138-1151. doi: 10.7150/ijbs.19436. eCollection 2017.

4.

The role of recombination in evolutionary adaptation of Escherichia coli to a novel nutrient.

Chu HY, Sprouffske K, Wagner A.

J Evol Biol. 2017 Sep;30(9):1692-1711. doi: 10.1111/jeb.13132. Epub 2017 Jul 13.

PMID:
28612351
5.

Growthcurver: an R package for obtaining interpretable metrics from microbial growth curves.

Sprouffske K, Wagner A.

BMC Bioinformatics. 2016 Apr 19;17:172. doi: 10.1186/s12859-016-1016-7.

6.

How Archiving by Freezing Affects the Genome-Scale Diversity of Escherichia coli Populations.

Sprouffske K, Aguilar-Rodríguez J, Wagner A.

Genome Biol Evol. 2016 May 9;8(5):1290-8. doi: 10.1093/gbe/evw054.

7.

An evolutionary explanation for the presence of cancer nonstem cells in neoplasms.

Sprouffske K, Athena Aktipis C, Radich JP, Carroll M, Nedelcu AM, Maley CC.

Evol Appl. 2013 Jan;6(1):92-101. doi: 10.1111/eva.12030. Epub 2012 Nov 26.

8.

Peto's paradox revisited: theoretical evolutionary dynamics of cancer in wild populations.

Roche B, Sprouffske K, Hbid H, Missé D, Thomas F.

Evol Appl. 2013 Jan;6(1):109-16. doi: 10.1111/eva.12025. Epub 2012 Nov 22.

9.

Cancer in light of experimental evolution.

Sprouffske K, Merlo LM, Gerrish PJ, Maley CC, Sniegowski PD.

Curr Biol. 2012 Sep 11;22(17):R762-71. doi: 10.1016/j.cub.2012.06.065. Review.

10.

Solving the puzzle of metastasis: the evolution of cell migration in neoplasms.

Chen J, Sprouffske K, Huang Q, Maley CC.

PLoS One. 2011 Apr 27;6(4):e17933. doi: 10.1371/journal.pone.0017933.

11.

Accurate reconstruction of the temporal order of mutations in neoplastic progression.

Sprouffske K, Pepper JW, Maley CC.

Cancer Prev Res (Phila). 2011 Jul;4(7):1135-44. doi: 10.1158/1940-6207.CAPR-10-0374. Epub 2011 Apr 13.

12.

Animal cell differentiation patterns suppress somatic evolution.

Pepper JW, Sprouffske K, Maley CC.

PLoS Comput Biol. 2007 Dec;3(12):e250.

13.

Fast NMDA receptor-mediated synaptic currents in neurons from mice lacking the epsilon2 (NR2B) subunit.

Tovar KR, Sprouffske K, Westbrook GL.

J Neurophysiol. 2000 Jan;83(1):616-20.

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