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Items: 1 to 50 of 172

1.

Impact of the inoculum composition on the structure of the total and active community and its performance in identically operated anaerobic reactors.

Lemoine L, Verbeke M, Bernaerts K, Springael D.

Appl Microbiol Biotechnol. 2019 Aug 14. doi: 10.1007/s00253-019-10041-8. [Epub ahead of print]

PMID:
31414161
2.

Aminobacter sp. MSH1 Mineralizes the Groundwater Micropollutant 2,6-Dichlorobenzamide through a Unique Chlorobenzoate Catabolic Pathway.

Raes B, Horemans B, Rentsch D, T'Syen J, Ghequire MGK, De Mot R, Wattiez R, Kohler HE, Springael D.

Environ Sci Technol. 2019 Sep 3;53(17):10146-10156. doi: 10.1021/acs.est.9b02021. Epub 2019 Aug 21.

PMID:
31386350
3.

The pesticide mineralization capacity in sand filter units of drinking water treatment plants (DWTP): Consistency in time and relationship with intake water and sand filter characteristics.

Vandermaesen J, Horemans B, Degryse J, Boonen J, Walravens E, Springael D.

Chemosphere. 2019 Aug;228:427-436. doi: 10.1016/j.chemosphere.2019.04.033. Epub 2019 Apr 9.

PMID:
31051344
4.

Intra- and inter-field diversity of 2,4-dichlorophenoxyacetic acid-degradative plasmids and their tfd catabolic genes in rice fields of the Mekong delta in Vietnam.

Nguyen TPO, Hansen MA, Hansen LH, Horemans B, Sørensen SJ, De Mot R, Springael D.

FEMS Microbiol Ecol. 2019 Jan 1;95(1). doi: 10.1093/femsec/fiy214.

PMID:
30380047
5.

Targeted metagenomics demonstrates the ecological role of IS1071 in bacterial community adaptation to pesticide degradation.

Dunon V, Bers K, Lavigne R, Top EM, Springael D.

Environ Microbiol. 2018 Nov;20(11):4091-4111. doi: 10.1111/1462-2920.14404. Epub 2018 Oct 5.

PMID:
30207068
6.

Catabolism of the groundwater micropollutant 2,6-dichlorobenzamide beyond 2,6-dichlorobenzoate is plasmid encoded in Aminobacter sp. MSH1.

T'Syen J, Raes B, Horemans B, Tassoni R, Leroy B, Lood C, van Noort V, Lavigne R, Wattiez R, Kohler HE, Springael D.

Appl Microbiol Biotechnol. 2018 Sep;102(18):7963-7979. doi: 10.1007/s00253-018-9189-9. Epub 2018 Jul 8.

PMID:
29984394
7.

Biofouling in membrane bioreactors: nexus between polyacrylonitrile surface charge and community composition.

Marbelia L, Hernalsteens MA, Ilyas S, Öztürk B, Szymczyk A, Springael D, Vankelecom I.

Biofouling. 2018 Mar;34(3):237-251. doi: 10.1080/08927014.2018.1428311. Epub 2018 Feb 15.

PMID:
29448813
8.

Molecular processes underlying synergistic linuron mineralization in a triple-species bacterial consortium biofilm revealed by differential transcriptomics.

Albers P, Weytjens B, De Mot R, Marchal K, Springael D.

Microbiologyopen. 2018 Apr;7(2):e00559. doi: 10.1002/mbo3.559. Epub 2018 Jan 3.

9.

Cofactor F430 as a biomarker for methanogenic activity: application to an anaerobic bioreactor system.

Passaris I, Van Gaelen P, Cornelissen R, Simoens K, Grauwels D, Vanhaecke L, Springael D, Smets I.

Appl Microbiol Biotechnol. 2018 Feb;102(3):1191-1201. doi: 10.1007/s00253-017-8681-y. Epub 2017 Dec 11.

PMID:
29230528
10.

Catabolic task division between two near-isogenic subpopulations co-existing in a herbicide-degrading bacterial consortium: consequences for the interspecies consortium metabolic model.

Albers P, Lood C, Özturk B, Horemans B, Lavigne R, van Noort V, De Mot R, Marchal K, Sanchez-Rodriguez A, Springael D.

Environ Microbiol. 2018 Jan;20(1):85-96. doi: 10.1111/1462-2920.13994. Epub 2017 Dec 15.

PMID:
29124862
11.

Response of the bacterial community in an on-farm biopurification system, to which diverse pesticides are introduced over an agricultural season.

Holmsgaard PN, Dealtry S, Dunon V, Heuer H, Hansen LH, Springael D, Smalla K, Riber L, Sørensen SJ.

Environ Pollut. 2017 Oct;229:854-862. doi: 10.1016/j.envpol.2017.07.026. Epub 2017 Jul 20.

PMID:
28734695
12.

Aminobacter sp. MSH1 invades sand filter community biofilms while retaining 2,6-dichlorobenzamide degradation functionality under C- and N-limiting conditions.

Horemans B, Vandermaesen J, Sekhar A, Rombouts C, Hofkens J, Vanhaecke L, Springael D.

FEMS Microbiol Ecol. 2017 Jun 1;93(6). doi: 10.1093/femsec/fix064.

PMID:
28498947
13.

Isolation and identification of culturable bacteria, capable of heterotrophic growth, from rapid sand filters of drinking water treatment plants.

Vandermaesen J, Lievens B, Springael D.

Res Microbiol. 2017 Jul - Aug;168(6):594-607. doi: 10.1016/j.resmic.2017.03.008. Epub 2017 Apr 12.

PMID:
28412534
14.

Genetic (In)stability of 2,6-Dichlorobenzamide Catabolism in Aminobacter sp. Strain MSH1 Biofilms under Carbon Starvation Conditions.

Horemans B, Raes B, Brocatus H, T'Syen J, Rombouts C, Vanhaecke L, Hofkens J, Springael D.

Appl Environ Microbiol. 2017 May 17;83(11). pii: e00137-17. doi: 10.1128/AEM.00137-17. Print 2017 Jun 1.

15.

Comparable dynamics of linuron catabolic genes and IncP-1 plasmids in biopurification systems (BPSs) as a response to linuron spiking.

Nour EH, Elsayed TR, Springael D, Smalla K.

Appl Microbiol Biotechnol. 2017 Jun;101(11):4815-4825. doi: 10.1007/s00253-017-8135-6. Epub 2017 Feb 24.

PMID:
28235988
16.

Carbon catabolite repression and cell dispersal affect degradation of the xenobiotic compound 3,4-dichloroaniline in Comamonas testosteroni WDL7 biofilms.

Horemans B, Breugelmans P, Hofkens J, Springael D.

FEMS Microbiol Ecol. 2017 Mar 1;93(3). doi: 10.1093/femsec/fix004.

PMID:
28104667
17.

Physiological and Transcriptome Response of the Polycyclic Aromatic Hydrocarbon Degrading Novosphingobium sp. LH128 after Inoculation in Soil.

Fida TT, Moreno-Forero SK, Breugelmans P, Heipieper HJ, Röling WF, Springael D.

Environ Sci Technol. 2017 Feb 7;51(3):1570-1579. doi: 10.1021/acs.est.6b03822. Epub 2017 Jan 18.

PMID:
28040887
18.

Biocarriers Improve Bioaugmentation Efficiency of a Rapid Sand Filter for the Treatment of 2,6-Dichlorobenzamide-Contaminated Drinking Water.

Horemans B, Raes B, Vandermaesen J, Simanjuntak Y, Brocatus H, T'Syen J, Degryse J, Boonen J, Wittebol J, Lapanje A, Sørensen SR, Springael D.

Environ Sci Technol. 2017 Feb 7;51(3):1616-1625. doi: 10.1021/acs.est.6b05027. Epub 2017 Jan 12.

PMID:
28027645
19.

Geochemical Parameters and Reductive Dechlorination Determine Aerobic Cometabolic vs Aerobic Metabolic Vinyl Chloride Biodegradation at Oxic/Anoxic Interface of Hyporheic Zones.

Atashgahi S, Lu Y, Ramiro-Garcia J, Peng P, Maphosa F, Sipkema D, Dejonghe W, Smidt H, Springael D.

Environ Sci Technol. 2017 Feb 7;51(3):1626-1634. doi: 10.1021/acs.est.6b05041. Epub 2017 Jan 11.

PMID:
28004913
20.

Soil-Bacterium Compatibility Model as a Decision-Making Tool for Soil Bioremediation.

Horemans B, Breugelmans P, Saeys W, Springael D.

Environ Sci Technol. 2017 Feb 7;51(3):1605-1615. doi: 10.1021/acs.est.6b04956. Epub 2017 Jan 17.

PMID:
28001051
21.

Dechlorination of three tetrachlorobenzene isomers by contaminated harbor sludge-derived enrichment cultures follows thermodynamically favorable reactions.

Lu Y, Ramiro-Garcia J, Vandermeeren P, Herrmann S, Cichocka D, Springael D, Atashgahi S, Smidt H.

Appl Microbiol Biotechnol. 2017 Mar;101(6):2589-2601. doi: 10.1007/s00253-016-8004-8. Epub 2016 Dec 1.

22.

Geochemical and microbial community determinants of reductive dechlorination at a site biostimulated with glycerol.

Atashgahi S, Lu Y, Zheng Y, Saccenti E, Suarez-Diez M, Ramiro-Garcia J, Eisenmann H, Elsner M, J M Stams A, Springael D, Dejonghe W, Smidt H.

Environ Microbiol. 2017 Mar;19(3):968-981. doi: 10.1111/1462-2920.13531. Epub 2016 Oct 6.

PMID:
27631786
23.

Draft Genome Sequence of Aeromonas sp. Strain EERV15.

Ehsani E, Barrantes I, Vandermaesen J, Geffers R, Jarek M, Boon N, Springael D, Pieper DH, Vilchez-Vargas R.

Genome Announc. 2016 Aug 18;4(4). pii: e00811-16. doi: 10.1128/genomeA.00811-16.

24.

Surface Colonization and Activity of the 2,6-Dichlorobenzamide (BAM) Degrading Aminobacter sp. Strain MSH1 at Macro- and Micropollutant BAM Concentrations.

Sekhar A, Horemans B, Aamand J, Sørensen SR, Vanhaecke L, Bussche JV, Hofkens J, Springael D.

Environ Sci Technol. 2016 Sep 20;50(18):10123-33. doi: 10.1021/acs.est.6b01978. Epub 2016 Sep 8.

PMID:
27537851
25.

Mineralization of the Common Groundwater Pollutant 2,6-Dichlorobenzamide (BAM) and its Metabolite 2,6-Dichlorobenzoic Acid (2,6-DCBA) in Sand Filter Units of Drinking Water Treatment Plants.

Vandermaesen J, Horemans B, Degryse J, Boonen J, Walravens E, Springael D.

Environ Sci Technol. 2016 Sep 20;50(18):10114-22. doi: 10.1021/acs.est.6b01352. Epub 2016 Sep 1.

PMID:
27533590
26.

Application of biodegradation in mitigating and remediating pesticide contamination of freshwater resources: state of the art and challenges for optimization.

Vandermaesen J, Horemans B, Bers K, Vandermeeren P, Herrmann S, Sekhar A, Seuntjens P, Springael D.

Appl Microbiol Biotechnol. 2016 Sep;100(17):7361-76. doi: 10.1007/s00253-016-7709-z. Epub 2016 Jul 30. Review.

PMID:
27475808
27.

Expanded insecticide catabolic activity gained by a single nucleotide substitution in a bacterial carbamate hydrolase gene.

Öztürk B, Ghequire M, Nguyen TP, De Mot R, Wattiez R, Springael D.

Environ Microbiol. 2016 Dec;18(12):4878-4887. doi: 10.1111/1462-2920.13409. Epub 2016 Jul 15.

PMID:
27312345
28.

Functional Redundancy of Linuron Degradation in Microbial Communities in Agricultural Soil and Biopurification Systems.

Horemans B, Bers K, Ruiz Romero E, Pose Juan E, Dunon V, De Mot R, Springael D.

Appl Environ Microbiol. 2016 Apr 18;82(9):2843-2853. doi: 10.1128/AEM.04018-15. Print 2016 May.

29.

Impact of dry-wet and freeze-thaw events on pesticide mineralizing populations and their activity in wetland ecosystems: A microcosm study.

Vandermeeren P, Baken S, Vanderstukken R, Diels J, Springael D.

Chemosphere. 2016 Mar;146:85-93. doi: 10.1016/j.chemosphere.2015.11.089. Epub 2015 Dec 20.

PMID:
26714290
30.

Exploring the complex response to linuron of bacterial communities from biopurification systems by means of cultivation-independent methods.

Dealtry S, Nour EH, Holmsgaard PN, Ding GC, Weichelt V, Dunon V, Heuer H, Hansen LH, Sørensen SJ, Springael D, Smalla K.

FEMS Microbiol Ecol. 2016 Feb;92(2). pii: fiv157. doi: 10.1093/femsec/fiv157. Epub 2015 Dec 23.

PMID:
26705572
31.

Impact of a wastewater treatment plant on microbial community composition and function in a hyporheic zone of a eutrophic river.

Atashgahi S, Aydin R, Dimitrov MR, Sipkema D, Hamonts K, Lahti L, Maphosa F, Kruse T, Saccenti E, Springael D, Dejonghe W, Smidt H.

Sci Rep. 2015 Nov 26;5:17284. doi: 10.1038/srep17284.

32.

Identification of the Amidase BbdA That Initiates Biodegradation of the Groundwater Micropollutant 2,6-dichlorobenzamide (BAM) in Aminobacter sp. MSH1.

T'Syen J, Tassoni R, Hansen L, Sorensen SJ, Leroy B, Sekhar A, Wattiez R, De Mot R, Springael D.

Environ Sci Technol. 2015 Oct 6;49(19):11703-13. doi: 10.1021/acs.est.5b02309. Epub 2015 Sep 10.

PMID:
26308673
33.

Draft Genome Sequence of the Carbofuran-Mineralizing Novosphingobium sp. Strain KN65.2.

Nguyen TP, De Mot R, Springael D.

Genome Announc. 2015 Jul 9;3(4). pii: e00764-15. doi: 10.1128/genomeA.00764-15.

34.

Biodegradation: Updating the concepts of control for microbial cleanup in contaminated aquifers.

Meckenstock RU, Elsner M, Griebler C, Lueders T, Stumpp C, Aamand J, Agathos SN, Albrechtsen HJ, Bastiaens L, Bjerg PL, Boon N, Dejonghe W, Huang WE, Schmidt SI, Smolders E, Sørensen SR, Springael D, van Breukelen BM.

Environ Sci Technol. 2015 Jun 16;49(12):7073-81. doi: 10.1021/acs.est.5b00715. Epub 2015 Jun 5. Review.

PMID:
26000605
35.

Characterization of a collection of plasmid-containing bacteria isolated from an on-farm biopurification system used for pesticide removal.

Martini MC, Albicoro FJ, Nour E, Schlüter A, van Elsas JD, Springael D, Smalla K, Pistorio M, Lagares A, Del Papa MF.

Plasmid. 2015 Jul;80:16-23. doi: 10.1016/j.plasmid.2015.05.001. Epub 2015 May 6.

PMID:
25957823
36.

Motile Geobacter dechlorinators migrate into a model source zone of trichloroethene dense non-aqueous phase liquid: experimental evaluation and modeling.

Philips J, Miroshnikov A, Haest PJ, Springael D, Smolders E.

J Contam Hydrol. 2014 Dec 1;170:28-38. doi: 10.1016/j.jconhyd.2014.09.010. Epub 2014 Oct 2.

PMID:
25306502
37.
38.

Diversity of dechlorination pathways and organohalide respiring bacteria in chlorobenzene dechlorinating enrichment cultures originating from river sludge.

Vandermeeren P, Herrmann S, Cichocka D, Busschaert P, Lievens B, Richnow HH, Springael D.

Biodegradation. 2014 Sep;25(5):757-76. doi: 10.1007/s10532-014-9697-y. Epub 2014 Jul 19.

PMID:
25037978
39.

Genetic and metabolic analysis of the carbofuran catabolic pathway in Novosphingobium sp. KN65.2.

Nguyen TP, Helbling DE, Bers K, Fida TT, Wattiez R, Kohler HP, Springael D, De Mot R.

Appl Microbiol Biotechnol. 2014 Oct;98(19):8235-52. doi: 10.1007/s00253-014-5858-5. Epub 2014 Jun 17.

PMID:
24931307
40.

Shifts in abundance and diversity of mobile genetic elements after the introduction of diverse pesticides into an on-farm biopurification system over the course of a year.

Dealtry S, Holmsgaard PN, Dunon V, Jechalke S, Ding GC, Krögerrecklenfort E, Heuer H, Hansen LH, Springael D, Zühlke S, Sørensen SJ, Smalla K.

Appl Environ Microbiol. 2014 Jul;80(13):4012-20. doi: 10.1128/AEM.04016-13. Epub 2014 Apr 25.

41.

Modeling the fate of Escherichia coli O157:H7 and Salmonella enterica in the agricultural environment: current perspective.

Ongeng D, Haberbeck LU, Mauriello G, Ryckeboer J, Springael D, Geeraerd AH.

J Food Sci. 2014 Apr;79(4):R421-7. doi: 10.1111/1750-3841.12392. Epub 2014 Mar 25. Review.

PMID:
24665963
42.

Identification of opsA, a gene involved in solute stress mitigation and survival in soil, in the polycyclic aromatic hydrocarbon-degrading bacterium Novosphingobium sp. strain LH128.

Fida TT, Breugelmans P, Lavigne R, van der Meer JR, De Mot R, Vaysse PJ, Springael D.

Appl Environ Microbiol. 2014 Jun;80(11):3350-61. doi: 10.1128/AEM.00306-14. Epub 2014 Mar 21.

43.

Cultivation-independent screening revealed hot spots of IncP-1, IncP-7 and IncP-9 plasmid occurrence in different environmental habitats.

Dealtry S, Ding GC, Weichelt V, Dunon V, Schlüter A, Martini MC, Del Papa MF, Lagares A, Amos GC, Wellington EM, Gaze WH, Sipkema D, Sjöling S, Springael D, Heuer H, van Elsas JD, Thomas C, Smalla K.

PLoS One. 2014 Feb 24;9(2):e89922. doi: 10.1371/journal.pone.0089922. eCollection 2014.

44.

Biofilm formation of a bacterial consortium on linuron at micropollutant concentrations in continuous flow chambers and the impact of dissolved organic matter.

Horemans B, Hofkens J, Smolders E, Springael D.

FEMS Microbiol Ecol. 2014 Apr;88(1):184-94. doi: 10.1111/1574-6941.12280. Epub 2014 Feb 5.

45.

Community structure and PAH ring-hydroxylating dioxygenase genes of a marine pyrene-degrading microbial consortium.

Gallego S, Vila J, Tauler M, Nieto JM, Breugelmans P, Springael D, Grifoll M.

Biodegradation. 2014 Jul;25(4):543-56. doi: 10.1007/s10532-013-9680-z. Epub 2013 Dec 20.

PMID:
24356981
46.

Kinetics of dechlorination by Dehalococcoides mccartyi using different carbon sources.

Schneidewind U, Haest PJ, Atashgahi S, Maphosa F, Hamonts K, Maesen M, Calderer M, Seuntjens P, Smidt H, Springael D, Dejonghe W.

J Contam Hydrol. 2014 Feb;157:25-36. doi: 10.1016/j.jconhyd.2013.10.006. Epub 2013 Nov 8.

PMID:
24275111
47.

Determinants of the microbial community structure of eutrophic, hyporheic river sediments polluted with chlorinated aliphatic hydrocarbons.

Hamonts K, Ryngaert A, Smidt H, Springael D, Dejonghe W.

FEMS Microbiol Ecol. 2014 Mar;87(3):715-32. doi: 10.1111/1574-6941.12260. Epub 2013 Dec 10.

48.

Fate of Escherichia coli O157:H7 and Salmonella enterica in the manure-amended soil-plant ecosystem of fresh vegetable crops: a review.

Ongeng D, Geeraerd AH, Springael D, Ryckeboer J, Muyanja C, Mauriello G.

Crit Rev Microbiol. 2015;41(3):273-94. doi: 10.3109/1040841X.2013.829415. Epub 2013 Oct 1. Review.

PMID:
24083946
49.

Is biological treatment a viable alternative for micropollutant removal in drinking water treatment processes?

Benner J, Helbling DE, Kohler HP, Wittebol J, Kaiser E, Prasse C, Ternes TA, Albers CN, Aamand J, Horemans B, Springael D, Walravens E, Boon N.

Water Res. 2013 Oct 15;47(16):5955-76. doi: 10.1016/j.watres.2013.07.015. Epub 2013 Aug 9.

PMID:
24053940
50.

Evaluation of solid polymeric organic materials for use in bioreactive sediment capping to stimulate the degradation of chlorinated aliphatic hydrocarbons.

Atashgahi S, Maphosa F, De Vrieze J, Haest PJ, Boon N, Smidt H, Springael D, Dejonghe W.

Appl Microbiol Biotechnol. 2014 Mar;98(5):2255-66. doi: 10.1007/s00253-013-5138-9. Epub 2013 Aug 17.

PMID:
23955471

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