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Items: 1 to 50 of 94

1.

Identification of Widespread Antibiotic Exposure in Patients With Cholera Correlates With Clinically Relevant Microbiota Changes.

Alexandrova L, Haque F, Rodriguez P, Marrazzo AC, Grembi JA, Ramachandran V, Hryckowian AJ, Adams CM, Siddique MSA, Khan AI, Qadri F, Andrews JR, Rahman M, Spormann AM, Schoolnik GK, Chien A, Nelson EJ.

J Infect Dis. 2019 Oct 8;220(10):1655-1666. doi: 10.1093/infdis/jiz299.

2.

Methanococcus maripaludis Employs Three Functional Heterodisulfide Reductase Complexes for Flavin-Based Electron Bifurcation Using Hydrogen and Formate.

Milton RD, Ruth JC, Deutzmann JS, Spormann AM.

Biochemistry. 2018 Aug 14;57(32):4848-4857. doi: 10.1021/acs.biochem.8b00662. Epub 2018 Jul 30.

PMID:
30010323
3.

Fine-Tuned Protein Production in Methanosarcina acetivorans C2A.

Karim AA, Gestaut DR, Fincker M, Ruth JC, Holmes EC, Sheu W, Spormann AM.

ACS Synth Biol. 2018 Aug 17;7(8):1874-1885. doi: 10.1021/acssynbio.8b00062. Epub 2018 Jul 13.

PMID:
29920209
4.

Determination of Tobramycin in M9 Medium by LC-MS/MS: Signal Enhancement by Trichloroacetic Acid.

Huang L, Haagensen JAJ, Verotta D, Cheah V, Spormann AM, Aweeka F, Yang K.

J Anal Methods Chem. 2018 Apr 26;2018:7965124. doi: 10.1155/2018/7965124. eCollection 2018.

5.
6.

Mathematical Modeling of Biofilm Structures Using COMSTAT Data.

Verotta D, Haagensen J, Spormann AM, Yang K.

Comput Math Methods Med. 2017;2017:7246286. doi: 10.1155/2017/7246286. Epub 2017 Dec 20.

7.

Mediator-free enzymatic electrosynthesis of formate by the Methanococcus maripaludis heterodisulfide reductase supercomplex.

Lienemann M, Deutzmann JS, Milton RD, Sahin M, Spormann AM.

Bioresour Technol. 2018 Apr;254:278-283. doi: 10.1016/j.biortech.2018.01.036. Epub 2018 Jan 9.

PMID:
29413934
8.
9.

Spatiotemporal pharmacodynamics of meropenem- and tobramycin-treated Pseudomonas aeruginosa biofilms.

Haagensen J, Verotta D, Huang L, Engel J, Spormann AM, Yang K.

J Antimicrob Chemother. 2017 Dec 1;72(12):3357-3365. doi: 10.1093/jac/dkx288.

10.

Biochemistry of Catabolic Reductive Dehalogenation.

Fincker M, Spormann AM.

Annu Rev Biochem. 2017 Jun 20;86:357-386. doi: 10.1146/annurev-biochem-061516-044829. Review.

PMID:
28654328
11.

Survival of Vinyl Chloride Respiring Dehalococcoides mccartyi under Long-Term Electron Donor Limitation.

Mayer-Blackwell K, Azizian MF, Green JK, Spormann AM, Semprini L.

Environ Sci Technol. 2017 Feb 7;51(3):1635-1642. doi: 10.1021/acs.est.6b05050. Epub 2017 Jan 17.

PMID:
28002948
12.

1,2-Dichloroethane Exposure Alters the Population Structure, Metabolism, and Kinetics of a Trichloroethene-Dechlorinating Dehalococcoides mccartyi Consortium.

Mayer-Blackwell K, Fincker M, Molenda O, Callahan B, Sewell H, Holmes S, Edwards EA, Spormann AM.

Environ Sci Technol. 2016 Nov 15;50(22):12187-12196. Epub 2016 Nov 3.

PMID:
27809491
13.

Enhanced microbial electrosynthesis by using defined co-cultures.

Deutzmann JS, Spormann AM.

ISME J. 2017 Mar;11(3):704-714. doi: 10.1038/ismej.2016.149. Epub 2016 Nov 1.

14.

Pf4 bacteriophage produced by Pseudomonas aeruginosa inhibits Aspergillus fumigatus metabolism via iron sequestration.

Penner JC, Ferreira JA, Secor PR, Sweere JM, Birukova MK, Joubert LM, Haagensen JA, Garcia O, Malkovskiy AV, Kaber G, Nazik H, Manasherob R, Spormann AM, Clemons KV, Stevens DA, Bollyky PL.

Microbiology. 2016 Sep;162(9):1583-1594. doi: 10.1099/mic.0.000344. Epub 2016 Jul 29.

PMID:
27473221
15.

Erratum for Nazik et al., effects of iron chelators on the formation and development of Aspergillus fumigatus biofilm.

Nazik H, Penner JC, Ferreira JA, Haagensen JA, Cohen K, Spormann AM, Martinez M, Chen V, Hsu JL, Clemons KV, Stevens DA.

Antimicrob Agents Chemother. 2015 Nov;59(11):7160. doi: 10.1128/AAC.02353-15. No abstract available.

16.

Inhibition of Aspergillus fumigatus and Its Biofilm by Pseudomonas aeruginosa Is Dependent on the Source, Phenotype and Growth Conditions of the Bacterium.

Ferreira JA, Penner JC, Moss RB, Haagensen JA, Clemons KV, Spormann AM, Nazik H, Cohen K, Banaei N, Carolino E, Stevens DA.

PLoS One. 2015 Aug 7;10(8):e0134692. doi: 10.1371/journal.pone.0134692. eCollection 2015.

17.

Effects of Iron Chelators on the Formation and Development of Aspergillus fumigatus Biofilm.

Nazik H, Penner JC, Ferreira JA, Haagensen JA, Cohen K, Spormann AM, Martinez M, Chen V, Hsu JL, Clemons KV, Stevens DA.

Antimicrob Agents Chemother. 2015 Oct;59(10):6514-20. doi: 10.1128/AAC.01684-15. Epub 2015 Aug 3. Erratum in: Antimicrob Agents Chemother. 2015 Nov;59(11):7160.

18.

Dehalococcoides mccartyi gen. nov., sp. nov., obligately organohalide-respiring anaerobic bacteria relevant to halogen cycling and bioremediation, belong to a novel bacterial class, Dehalococcoidia classis nov., order Dehalococcoidales ord. nov. and family Dehalococcoidaceae fam. nov., within the phylum Chloroflexi.

Löffler FE, Yan J, Ritalahti KM, Adrian L, Edwards EA, Konstantinidis KT, Müller JA, Fullerton H, Zinder SH, Spormann AM.

Int J Syst Evol Microbiol. 2015 Jun;65(Pt 6):2015. doi: 10.1099/ijs.0.000308. No abstract available.

PMID:
26184667
19.

Extracellular enzymes facilitate electron uptake in biocorrosion and bioelectrosynthesis.

Deutzmann JS, Sahin M, Spormann AM.

MBio. 2015 Apr 21;6(2). pii: e00496-15. doi: 10.1128/mBio.00496-15.

20.

Biochemical and EPR-spectroscopic investigation into heterologously expressed vinyl chloride reductive dehalogenase (VcrA) from Dehalococcoides mccartyi strain VS.

Parthasarathy A, Stich TA, Lohner ST, Lesnefsky A, Britt RD, Spormann AM.

J Am Chem Soc. 2015 Mar 18;137(10):3525-32. doi: 10.1021/ja511653d. Epub 2015 Mar 4.

21.

Revisiting N₂ fixation in Guerrero Negro intertidal microbial mats with a functional single-cell approach.

Woebken D, Burow LC, Behnam F, Mayali X, Schintlmeister A, Fleming ED, Prufert-Bebout L, Singer SW, Cortés AL, Hoehler TM, Pett-Ridge J, Spormann AM, Wagner M, Weber PK, Bebout BM.

ISME J. 2015 Feb;9(2):485-96. doi: 10.1038/ismej.2014.144. Epub 2014 Oct 10.

22.

Bacteria from diverse habitats colonize and compete in the mouse gut.

Seedorf H, Griffin NW, Ridaura VK, Reyes A, Cheng J, Rey FE, Smith MI, Simon GM, Scheffrahn RH, Woebken D, Spormann AM, Van Treuren W, Ursell LK, Pirrung M, Robbins-Pianka A, Cantarel BL, Lombard V, Henrissat B, Knight R, Gordon JI.

Cell. 2014 Oct 9;159(2):253-66. doi: 10.1016/j.cell.2014.09.008. Epub 2014 Oct 2.

23.

Nanoliter qPCR platform for highly parallel, quantitative assessment of reductive dehalogenase genes and populations of dehalogenating microorganisms in complex environments.

Mayer-Blackwell K, Azizian MF, Machak C, Vitale E, Carpani G, de Ferra F, Semprini L, Spormann AM.

Environ Sci Technol. 2014 Aug 19;48(16):9659-67. doi: 10.1021/es500918w. Epub 2014 Jul 21.

PMID:
25046033
24.

Influence of setup and carbon source on the bacterial community of biocathodes in microbial electrolysis cells.

Croese E, Jeremiasse AW, Marshall IP, Spormann AM, Euverink GJ, Geelhoed JS, Stams AJ, Plugge CM.

Enzyme Microb Technol. 2014 Jul-Aug;61-62:67-75. doi: 10.1016/j.enzmictec.2014.04.019. Epub 2014 May 9.

PMID:
24910339
25.

Hydrogenase-independent uptake and metabolism of electrons by the archaeon Methanococcus maripaludis.

Lohner ST, Deutzmann JS, Logan BE, Leigh J, Spormann AM.

ISME J. 2014 Aug;8(8):1673-81. doi: 10.1038/ismej.2014.82. Epub 2014 May 20.

26.

Identification of Desulfobacterales as primary hydrogenotrophs in a complex microbial mat community.

Burow LC, Woebken D, Marshall IP, Singer SW, Pett-Ridge J, Prufert-Bebout L, Spormann AM, Bebout BM, Weber PK, Hoehler TM.

Geobiology. 2014 May;12(3):221-30. doi: 10.1111/gbi.12080.

PMID:
24730641
27.

Fermentation couples Chloroflexi and sulfate-reducing bacteria to Cyanobacteria in hypersaline microbial mats.

Lee JZ, Burow LC, Woebken D, Everroad RC, Kubo MD, Spormann AM, Weber PK, Pett-Ridge J, Bebout BM, Hoehler TM.

Front Microbiol. 2014 Feb 26;5:61. doi: 10.3389/fmicb.2014.00061. eCollection 2014.

28.

Single cell genomic study of Dehalococcoidetes species from deep-sea sediments of the Peruvian Margin.

Kaster AK, Mayer-Blackwell K, Pasarelli B, Spormann AM.

ISME J. 2014 Sep;8(9):1831-42. doi: 10.1038/ismej.2014.24. Epub 2014 Mar 6.

29.

Microbially enhanced dissolution of HgS in an acid mine drainage system in the California Coast Range.

Jew AD, Behrens SF, Rytuba JJ, Kappler A, Spormann AM, Brown GE Jr.

Geobiology. 2014 Jan;12(1):20-33. doi: 10.1111/gbi.12066. Epub 2013 Nov 13.

PMID:
24224806
30.

Inferring community dynamics of organohalide-respiring bacteria in chemostats by covariance of rdhA gene abundance.

Marshall IP, Azizian MF, Semprini L, Spormann AM.

FEMS Microbiol Ecol. 2014 Feb;87(2):428-40. doi: 10.1111/1574-6941.12235. Epub 2013 Oct 28.

31.

PdeB, a cyclic Di-GMP-specific phosphodiesterase that regulates Shewanella oneidensis MR-1 motility and biofilm formation.

Chao L, Rakshe S, Leff M, Spormann AM.

J Bacteriol. 2013 Sep;195(17):3827-33. doi: 10.1128/JB.00498-13. Epub 2013 Jun 21.

32.

The mxd operon in Shewanella oneidensis MR-1 is induced in response to starvation and regulated by ArcS/ArcA and BarA/UvrY.

Müller J, Shukla S, Jost KA, Spormann AM.

BMC Microbiol. 2013 May 27;13:119. doi: 10.1186/1471-2180-13-119.

33.

Identification of a reductive tetrachloroethene dehalogenase in Shewanella sediminis.

Lohner ST, Spormann AM.

Philos Trans R Soc Lond B Biol Sci. 2013 Mar 11;368(1616):20120326. doi: 10.1098/rstb.2012.0326. Print 2013 Apr 19.

34.

Effects of sulfate reduction on the bacterial community and kinetic parameters of a dechlorinating culture under chemostat growth conditions.

Berggren DR, Marshall IP, Azizian MF, Spormann AM, Semprini L.

Environ Sci Technol. 2013 Feb 19;47(4):1879-86. doi: 10.1021/es304244z. Epub 2013 Jan 28.

PMID:
23316874
35.

Anoxic carbon flux in photosynthetic microbial mats as revealed by metatranscriptomics.

Burow LC, Woebken D, Marshall IP, Lindquist EA, Bebout BM, Prufert-Bebout L, Hoehler TM, Tringe SG, Pett-Ridge J, Weber PK, Spormann AM, Singer SW.

ISME J. 2013 Apr;7(4):817-29. doi: 10.1038/ismej.2012.150. Epub 2012 Nov 29.

36.

A Single-cell genome for Thiovulum sp.

Marshall IP, Blainey PC, Spormann AM, Quake SR.

Appl Environ Microbiol. 2012 Dec;78(24):8555-63. doi: 10.1128/AEM.02314-12. Epub 2012 Sep 28.

37.
38.

Identification of a novel cyanobacterial group as active diazotrophs in a coastal microbial mat using NanoSIMS analysis.

Woebken D, Burow LC, Prufert-Bebout L, Bebout BM, Hoehler TM, Pett-Ridge J, Spormann AM, Weber PK, Singer SW.

ISME J. 2012 Jul;6(7):1427-39. doi: 10.1038/ismej.2011.200. Epub 2012 Jan 12.

39.

Hydrogen production in photosynthetic microbial mats in the Elkhorn Slough estuary, Monterey Bay.

Burow LC, Woebken D, Bebout BM, McMurdie PJ, Singer SW, Pett-Ridge J, Prufert-Bebout L, Spormann AM, Weber PK, Hoehler TM.

ISME J. 2012 Apr;6(4):863-74. doi: 10.1038/ismej.2011.142. Epub 2011 Oct 20.

40.

The Hydrogenase Chip: a tiling oligonucleotide DNA microarray technique for characterizing hydrogen-producing and -consuming microbes in microbial communities.

Marshall IP, Berggren DR, Azizian MF, Burow LC, Semprini L, Spormann AM.

ISME J. 2012 Apr;6(4):814-26. doi: 10.1038/ismej.2011.136. Epub 2011 Oct 13.

41.

Site-specific mobilization of vinyl chloride respiration islands by a mechanism common in Dehalococcoides.

McMurdie PJ, Hug LA, Edwards EA, Holmes S, Spormann AM.

BMC Genomics. 2011 Jun 2;12:287. doi: 10.1186/1471-2164-12-287.

42.

Energy-dependent stability of Shewanella oneidensis MR-1 biofilms.

Saville RM, Rakshe S, Haagensen JA, Shukla S, Spormann AM.

J Bacteriol. 2011 Jul;193(13):3257-64. doi: 10.1128/JB.00251-11. Epub 2011 May 13.

43.

Antimicrobial peptoids are effective against Pseudomonas aeruginosa biofilms.

Kapoor R, Wadman MW, Dohm MT, Czyzewski AM, Spormann AM, Barron AE.

Antimicrob Agents Chemother. 2011 Jun;55(6):3054-7. doi: 10.1128/AAC.01516-10. Epub 2011 Mar 21.

44.

Partial functional replacement of CymA by SirCD in Shewanella oneidensis MR-1.

Cordova CD, Schicklberger MF, Yu Y, Spormann AM.

J Bacteriol. 2011 May;193(9):2312-21. doi: 10.1128/JB.01355-10. Epub 2011 Mar 4.

45.

Indirect modulation of the intracellular c-Di-GMP level in Shewanella oneidensis MR-1 by MxdA.

Rakshe S, Leff M, Spormann AM.

Appl Environ Microbiol. 2011 Mar;77(6):2196-8. doi: 10.1128/AEM.01985-10. Epub 2011 Jan 28.

46.

Spatiotemporal activity of the mshA gene system in Shewanella oneidensis MR-1 biofilms.

Saville RM, Dieckmann N, Spormann AM.

FEMS Microbiol Lett. 2010 Jul 1;308(1):76-83. doi: 10.1111/j.1574-6968.2010.01995.x. Epub 2010 Apr 21.

47.

Comparison of lactate, formate, and propionate as hydrogen donors for the reductive dehalogenation of trichloroethene in a continuous-flow column.

Azizian MF, Marshall IP, Behrens S, Spormann AM, Semprini L.

J Contam Hydrol. 2010 Apr 1;113(1-4):77-92. doi: 10.1016/j.jconhyd.2010.02.004. Epub 2010 Feb 12.

PMID:
20202715
48.

Contributions of Francisella tularensis subsp. novicida chitinases and Sec secretion system to biofilm formation on chitin.

Margolis JJ, El-Etr S, Joubert LM, Moore E, Robison R, Rasley A, Spormann AM, Monack DM.

Appl Environ Microbiol. 2010 Jan;76(2):596-608. doi: 10.1128/AEM.02037-09. Epub 2009 Nov 30.

49.

Localized plasticity in the streamlined genomes of vinyl chloride respiring Dehalococcoides.

McMurdie PJ, Behrens SF, Müller JA, Göke J, Ritalahti KM, Wagner R, Goltsman E, Lapidus A, Holmes S, Löffler FE, Spormann AM.

PLoS Genet. 2009 Nov;5(11):e1000714. doi: 10.1371/journal.pgen.1000714. Epub 2009 Nov 6.

50.

Periplasmic electron transfer via the c-type cytochromes MtrA and FccA of Shewanella oneidensis MR-1.

Schuetz B, Schicklberger M, Kuermann J, Spormann AM, Gescher J.

Appl Environ Microbiol. 2009 Dec;75(24):7789-96. doi: 10.1128/AEM.01834-09. Epub 2009 Oct 16.

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