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Items: 12

1.

Network-based prediction of protein interactions.

Kovács IA, Luck K, Spirohn K, Wang Y, Pollis C, Schlabach S, Bian W, Kim DK, Kishore N, Hao T, Calderwood MA, Vidal M, Barabási AL.

Nat Commun. 2019 Mar 18;10(1):1240. doi: 10.1038/s41467-019-09177-y.

2.

Keap1-Independent Regulation of Nrf2 Activity by Protein Acetylation and a BET Bromodomain Protein.

Chatterjee N, Tian M, Spirohn K, Boutros M, Bohmann D.

PLoS Genet. 2016 May 27;12(5):e1006072. doi: 10.1371/journal.pgen.1006072. eCollection 2016 May.

3.

eIF4A inactivates TORC1 in response to amino acid starvation.

Tsokanos FF, Albert MA, Demetriades C, Spirohn K, Boutros M, Teleman AA.

EMBO J. 2016 May 17;35(10):1058-76. doi: 10.15252/embj.201593118. Epub 2016 Mar 17.

4.

Cdk12 Is A Gene-Selective RNA Polymerase II Kinase That Regulates a Subset of the Transcriptome, Including Nrf2 Target Genes.

Li X, Chatterjee N, Spirohn K, Boutros M, Bohmann D.

Sci Rep. 2016 Feb 25;6:21455. doi: 10.1038/srep21455.

5.

Widespread Expansion of Protein Interaction Capabilities by Alternative Splicing.

Yang X, Coulombe-Huntington J, Kang S, Sheynkman GM, Hao T, Richardson A, Sun S, Yang F, Shen YA, Murray RR, Spirohn K, Begg BE, Duran-Frigola M, MacWilliams A, Pevzner SJ, Zhong Q, Trigg SA, Tam S, Ghamsari L, Sahni N, Yi S, Rodriguez MD, Balcha D, Tan G, Costanzo M, Andrews B, Boone C, Zhou XJ, Salehi-Ashtiani K, Charloteaux B, Chen AA, Calderwood MA, Aloy P, Roth FP, Hill DE, Iakoucheva LM, Xia Y, Vidal M.

Cell. 2016 Feb 11;164(4):805-17. doi: 10.1016/j.cell.2016.01.029.

6.

Discovery of progenitor cell signatures by time-series synexpression analysis during Drosophila embryonic cell immortalization.

Dequéant ML, Fagegaltier D, Hu Y, Spirohn K, Simcox A, Hannon GJ, Perrimon N.

Proc Natl Acad Sci U S A. 2015 Oct 20;112(42):12974-9. doi: 10.1073/pnas.1517729112. Epub 2015 Oct 5. Erratum in: Proc Natl Acad Sci U S A. 2015 Nov 17;112(46):E6408.

7.

A proteome-scale map of the human interactome network.

Rolland T, Taşan M, Charloteaux B, Pevzner SJ, Zhong Q, Sahni N, Yi S, Lemmens I, Fontanillo C, Mosca R, Kamburov A, Ghiassian SD, Yang X, Ghamsari L, Balcha D, Begg BE, Braun P, Brehme M, Broly MP, Carvunis AR, Convery-Zupan D, Corominas R, Coulombe-Huntington J, Dann E, Dreze M, Dricot A, Fan C, Franzosa E, Gebreab F, Gutierrez BJ, Hardy MF, Jin M, Kang S, Kiros R, Lin GN, Luck K, MacWilliams A, Menche J, Murray RR, Palagi A, Poulin MM, Rambout X, Rasla J, Reichert P, Romero V, Ruyssinck E, Sahalie JM, Scholz A, Shah AA, Sharma A, Shen Y, Spirohn K, Tam S, Tejeda AO, Trigg SA, Twizere JC, Vega K, Walsh J, Cusick ME, Xia Y, Barabási AL, Iakoucheva LM, Aloy P, De Las Rivas J, Tavernier J, Calderwood MA, Hill DE, Hao T, Roth FP, Vidal M.

Cell. 2014 Nov 20;159(5):1212-1226. doi: 10.1016/j.cell.2014.10.050.

8.

Functional analysis of the Drosophila embryonic germ cell transcriptome by RNA interference.

Jankovics F, Henn L, Bujna Á, Vilmos P, Spirohn K, Boutros M, Erdélyi M.

PLoS One. 2014 Jun 4;9(6):e98579. doi: 10.1371/journal.pone.0098579. eCollection 2014.

9.

Landscape of protein-protein interactions in Drosophila immune deficiency signaling during bacterial challenge.

Fukuyama H, Verdier Y, Guan Y, Makino-Okamura C, Shilova V, Liu X, Maksoud E, Matsubayashi J, Haddad I, Spirohn K, Ono K, Hetru C, Rossier J, Ideker T, Boutros M, Vinh J, Hoffmann JA.

Proc Natl Acad Sci U S A. 2013 Jun 25;110(26):10717-22. doi: 10.1073/pnas.1304380110. Epub 2013 Jun 7.

10.

p24 proteins are required for secretion of Wnt ligands.

Buechling T, Chaudhary V, Spirohn K, Weiss M, Boutros M.

EMBO Rep. 2011 Dec 1;12(12):1265-72. doi: 10.1038/embor.2011.212.

11.

Drosophila Ras/MAPK signalling regulates innate immune responses in immune and intestinal stem cells.

Ragab A, Buechling T, Gesellchen V, Spirohn K, Boettcher AL, Boutros M.

EMBO J. 2011 Mar 16;30(6):1123-36. doi: 10.1038/emboj.2011.4. Epub 2011 Feb 4.

12.

Wnt/Frizzled signaling requires dPRR, the Drosophila homolog of the prorenin receptor.

Buechling T, Bartscherer K, Ohkawara B, Chaudhary V, Spirohn K, Niehrs C, Boutros M.

Curr Biol. 2010 Jul 27;20(14):1263-8. doi: 10.1016/j.cub.2010.05.028. Epub 2010 Jun 24.

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