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Just the tonic! Legume biorefining for alcohol has the potential to reduce Europe's protein deficit and mitigate climate change.

Lienhardt T, Black K, Saget S, Costa MP, Chadwick D, Rees RM, Williams M, Spillane C, Iannetta PM, Walker G, Styles D.

Environ Int. 2019 Sep;130:104870. doi: 10.1016/j.envint.2019.05.064. Epub 2019 Jun 18.


Paternally Expressed Imprinted Genes under Positive Darwinian Selection in Arabidopsis thaliana.

Tuteja R, McKeown PC, Ryan P, Morgan CC, Donoghue MTA, Downing T, O'Connell MJ, Spillane C.

Mol Biol Evol. 2019 Jun 1;36(6):1239-1253. doi: 10.1093/molbev/msz063.


Suppression of Natural Killer cell NKG2D and CD226 anti-tumour cascades by platelet cloaked cancer cells: Implications for the metastatic cascade.

Cluxton CD, Spillane C, O'Toole SA, Sheils O, Gardiner CM, O'Leary JJ.

PLoS One. 2019 Mar 25;14(3):e0211538. doi: 10.1371/journal.pone.0211538. eCollection 2019.


Transgenerational effects of inter-ploidy cross direction on reproduction and F2 seed development of Arabidopsis thaliana F1 hybrid triploids.

Duszynska D, Vilhjalmsson B, Castillo Bravo R, Swamidatta S, Juenger TE, Donoghue MTA, Comte A, Nordborg M, Sharbel TF, Brychkova G, McKeown PC, Spillane C.

Plant Reprod. 2019 Sep;32(3):275-289. doi: 10.1007/s00497-019-00369-6. Epub 2019 Mar 21.


Reduction in nutritional quality and growing area suitability of common bean under climate change induced drought stress in Africa.

Hummel M, Hallahan BF, Brychkova G, Ramirez-Villegas J, Guwela V, Chataika B, Curley E, McKeown PC, Morrison L, Talsma EF, Beebe S, Jarvis A, Chirwa R, Spillane C.

Sci Rep. 2018 Nov 1;8(1):16187. doi: 10.1038/s41598-018-33952-4.


Sensory and cultural acceptability tradeoffs with nutritional content of biofortified orange-fleshed sweetpotato varieties among households with children in Malawi.

Hummel M, Talsma EF, Van der Honing A, Gama AC, Van Vugt D, Brouwer ID, Spillane C.

PLoS One. 2018 Oct 18;13(10):e0204754. doi: 10.1371/journal.pone.0204754. eCollection 2018.


Hybridity has a greater effect than paternal genome dosage on heterosis in sugar beet (Beta vulgaris).

Hallahan BF, Fernandez-Tendero E, Fort A, Ryder P, Dupouy G, Deletre M, Curley E, Brychkova G, Schulz B, Spillane C.

BMC Plant Biol. 2018 Jun 15;18(1):120. doi: 10.1186/s12870-018-1338-x.


Retraction for Fouhy et al., "Diffusible Signal Factor-Dependent Cell-Cell Signaling and Virulence in the Nosocomial Pathogen Stenotrophomonas maltophilia".

Fouhy Y, Scanlon K, Schouest K, Spillane C, Crossman L, Avison MB, Ryan RP, Dow JM.

J Bacteriol. 2018 May 24;200(12). pii: e00235-18. doi: 10.1128/JB.00235-18. Print 2018 Jun 15. No abstract available.


Genetic Loci Controlling Carotenoid Biosynthesis in Diverse Tropical Maize Lines.

Azmach G, Menkir A, Spillane C, Gedil M.

G3 (Bethesda). 2018 Mar 2;8(3):1049-1065. doi: 10.1534/g3.117.300511.


CD10-/ALDH- cells are the sole cisplatin-resistant component of a novel ovarian cancer stem cell hierarchy.

Ffrench B, Gasch C, Hokamp K, Spillane C, Blackshields G, Mahgoub TM, Bates M, Kehoe L, Mooney A, Doyle R, Doyle B, O'Donnell D, Gleeson N, Hennessy BT, Stordal B, O'Riain C, Lambkin H, O'Toole S, O'Leary JJ, Gallagher MF.

Cell Death Dis. 2017 Oct 19;8(10):e3128. doi: 10.1038/cddis.2017.379.


Parental-genome dosage effects on the transcriptome of F1 hybrid triploid embryos of Arabidopsis thaliana.

Fort A, Tuteja R, Braud M, McKeown PC, Spillane C.

Plant J. 2017 Dec;92(6):1044-1058. doi: 10.1111/tpj.13740. Epub 2017 Nov 28.


Assessing and Exploiting Functional Diversity in Germplasm Pools to Enhance Abiotic Stress Adaptation and Yield in Cereals and Food Legumes.

Dwivedi SL, Scheben A, Edwards D, Spillane C, Ortiz R.

Front Plant Sci. 2017 Aug 29;8:1461. doi: 10.3389/fpls.2017.01461. eCollection 2017. Review.


MyD88 is an essential component of retinoic acid-induced differentiation in human pluripotent embryonal carcinoma cells.

Sulaiman G, Cooke A, Ffrench B, Gasch C, Abdullai OA, O'Connor K, Elbaruni S, Blackshields G, Spillane C, Keegan H, McEneaney V, Knittel R, Rogers A, Jeffery IB, Doyle B, Bates M, d'Adhemar C, Lee MY, Campbell EL, Moynagh PN, Higgins DG, O'Toole S, O'Neill L, O'Leary JJ, Gallagher MF.

Cell Death Differ. 2017 Nov;24(11):1975-1986. doi: 10.1038/cdd.2017.124. Epub 2017 Sep 8.


Generation of stable nulliplex autopolyploid lines of Arabidopsis thaliana using CRISPR/Cas9 genome editing.

Ryder P, McHale M, Fort A, Spillane C.

Plant Cell Rep. 2017 Jun;36(6):1005-1008. doi: 10.1007/s00299-017-2125-0. Epub 2017 Mar 13.


Genome-Wide microRNA Binding Site Variation between Extinct Wild Aurochs and Modern Cattle Identifies Candidate microRNA-Regulated Domestication Genes.

Braud M, Magee DA, Park SD, Sonstegard TS, Waters SM, MacHugh DE, Spillane C.

Front Genet. 2017 Jan 31;8:3. doi: 10.3389/fgene.2017.00003. eCollection 2017.


Allele-specific splicing effects on DKKL1 and ZNF419 transcripts in HeLa cells.

Martin G, Selcuklu SD, Schouest K, Nembaware V, McKeown PC, Seoighe C, Spillane C.

Gene. 2017 Jan 20;598:107-112. doi: 10.1016/j.gene.2016.11.004. Epub 2016 Nov 5.


A Polynucleotide Repeat Expansion Causing Temperature-Sensitivity Persists in Wild Irish Accessions of Arabidopsis thaliana.

Tabib A, Vishwanathan S, Seleznev A, McKeown PC, Downing T, Dent C, Sanchez-Bermejo E, Colling L, Spillane C, Balasubramanian S.

Front Plant Sci. 2016 Aug 31;7:1311. doi: 10.3389/fpls.2016.01311. eCollection 2016.


Origin of year-long bean (Phaseolus dumosus Macfady, Fabaceae) from reticulated hybridization events between multiple Phaseolus species.

Mina-Vargas AM, McKeown PC, Flanagan NS, Debouck DG, Kilian A, Hodkinson TR, Spillane C.

Ann Bot. 2016 Aug 6. pii: mcw138. [Epub ahead of print]


Is satisfaction with surgeon a determining factor in patient reported outcomes in breast reconstruction?

de Blacam C, Healy C, Quinn L, Spillane C, Boyle T, Eadie PA, Connolly EM, O'Donovan D.

J Plast Reconstr Aesthet Surg. 2016 Sep;69(9):1248-53. doi: 10.1016/j.bjps.2016.06.018. Epub 2016 Jul 1.


Smallholder Farmers and Climate Smart Agriculture: Technology and Labor-productivity Constraints amongst Women Smallholders in Malawi.

Murray U, Gebremedhin Z, Brychkova G, Spillane C.

Gend Technol Dev. 2016 Jul;20(2):117-148. doi: 10.1177/0971852416640639. Epub 2017 Oct 25. No abstract available.


Altered expression of mir-222 and mir-25 influences diverse gene expression changes in transformed normal and anaplastic thyroid cells, and impacts on MEK and TRAIL protein expression.

Aherne ST, Smyth P, Freeley M, Smith L, Spillane C, O'Leary J, Sheils O.

Int J Mol Med. 2016 Aug;38(2):433-45. doi: 10.3892/ijmm.2016.2653. Epub 2016 Jun 22.


Spleen and gone? An interesting case of fever in a young man.

Rowe CM, Spillane C, Winterton D, Pilkington LB.

BMJ Case Rep. 2016 Jun 1;2016. pii: bcr2016216196. doi: 10.1136/bcr-2016-216196. No abstract available.


Comparative Transcriptome Analysis of Two Ascophyllum nodosum Extract Biostimulants: Same Seaweed but Different.

Goñi O, Fort A, Quille P, McKeown PC, Spillane C, O'Connell S.

J Agric Food Chem. 2016 Apr 13;64(14):2980-9. doi: 10.1021/acs.jafc.6b00621. Epub 2016 Apr 1.


Quantitative Genetics Identifies Cryptic Genetic Variation Involved in the Paternal Regulation of Seed Development.

Pires ND, Bemer M, Müller LM, Baroux C, Spillane C, Grossniklaus U.

PLoS Genet. 2016 Jan 26;12(1):e1005806. doi: 10.1371/journal.pgen.1005806. eCollection 2016 Jan.


The triploid East African Highland Banana (EAHB) genepool is genetically uniform arising from a single ancestral clone that underwent population expansion by vegetative propagation.

Kitavi M, Downing T, Lorenzen J, Karamura D, Onyango M, Nyine M, Ferguson M, Spillane C.

Theor Appl Genet. 2016 Mar;129(3):547-61. doi: 10.1007/s00122-015-2647-1. Epub 2016 Jan 8.


Genome sequencing of the extinct Eurasian wild aurochs, Bos primigenius, illuminates the phylogeography and evolution of cattle.

Park SD, Magee DA, McGettigan PA, Teasdale MD, Edwards CJ, Lohan AJ, Murphy A, Braud M, Donoghue MT, Liu Y, Chamberlain AT, Rue-Albrecht K, Schroeder S, Spillane C, Tai S, Bradley DG, Sonstegard TS, Loftus BJ, MacHugh DE.

Genome Biol. 2015 Oct 26;16:234. doi: 10.1186/s13059-015-0790-2.


Endosomal gene expression: a new indicator for prostate cancer patient prognosis?

Johnson IR, Parkinson-Lawrence EJ, Keegan H, Spillane CD, Barry-O'Crowley J, Watson WR, Selemidis S, Butler LM, O'Leary JJ, Brooks DA.

Oncotarget. 2015 Nov 10;6(35):37919-29. doi: 10.18632/oncotarget.6114.


Effect of constituents from samaras of Austroplenckia populnea (Celastraceae) on human cancer cells.

Caneschi CM, Muniyappa MK, Duarte LP, Silva GD, Dos Santos OD, Spillane C, Filho SA.

J Intercult Ethnopharmacol. 2015 Jan-Mar;4(1):6-11. doi: 10.5455/jice.20141006105747. Epub 2014 Nov 28.


Disaggregating polyploidy, parental genome dosage and hybridity contributions to heterosis in Arabidopsis thaliana.

Fort A, Ryder P, McKeown PC, Wijnen C, Aarts MG, Sulpice R, Spillane C.

New Phytol. 2016 Jan;209(2):590-9. doi: 10.1111/nph.13650. Epub 2015 Sep 23.


Aspirin and P2Y12 inhibition attenuate platelet-induced ovarian cancer cell invasion.

Cooke NM, Spillane CD, Sheils O, O'Leary J, Kenny D.

BMC Cancer. 2015 Sep 9;15:627. doi: 10.1186/s12885-015-1634-x.


PATRONUS1 is expressed in meiotic prophase I to regulate centromeric cohesion in Arabidopsis and shows synthetic lethality with OSD1.

Singh DK, Spillane C, Siddiqi I.

BMC Plant Biol. 2015 Aug 14;15:201. doi: 10.1186/s12870-015-0558-6.


Genome-wide identification and in silico characterisation of microRNAs, their targets and processing pathway genes in Phaseolus vulgaris L.

de Sousa Cardoso TC, Portilho LG, de Oliveira CL, McKeown PC, Maluf WR, Gomes LA, Teixeira TA, do Amaral LR, Spillane C, de Souza Gomes M.

Plant Biol (Stuttg). 2016 Mar;18(2):206-19. doi: 10.1111/plb.12377. Epub 2015 Aug 25.


Identifying novel hypoxia-associated markers of chemoresistance in ovarian cancer.

McEvoy LM, O'Toole SA, Spillane CD, Martin CM, Gallagher MF, Stordal B, Blackshields G, Sheils O, O'Leary JJ.

BMC Cancer. 2015 Jul 25;15:547. doi: 10.1186/s12885-015-1539-8.


Enhanced regulation of cell cycle and suppression of osteoblast differentiation molecular signatures by prostate cancer stem-like holoclones.

Gallagher MF, Salley Y, Spillane CD, Ffrench B, El Baruni S, Blacksheilds G, Smyth P, Martin C, Sheils O, Watson W, O'Leary JJ.

J Clin Pathol. 2015 Sep;68(9):692-702. doi: 10.1136/jclinpath-2015-203001. Epub 2015 Jun 2.


Genomic imprinting effects on complex traits in domesticated animal species.

O'Doherty AM, MacHugh DE, Spillane C, Magee DA.

Front Genet. 2015 Apr 24;6:156. doi: 10.3389/fgene.2015.00156. eCollection 2015. Review.


ALCAM is indirectly modulated by miR-125b in MCF7 cells.

Akman HB, Selcuklu SD, Donoghue MT, Akhavantabasi S, Sapmaz A, Spillane C, Yakicier MC, Erson-Bensan AE.

Tumour Biol. 2015 May;36(5):3511-20. doi: 10.1007/s13277-014-2987-5. Epub 2014 Dec 25.


A novel serum microRNA panel to discriminate benign from malignant ovarian disease.

Langhe R, Norris L, Saadeh FA, Blackshields G, Varley R, Harrison A, Gleeson N, Spillane C, Martin C, O'Donnell DM, D'Arcy T, O'Leary J, O'Toole S.

Cancer Lett. 2015 Jan 28;356(2 Pt B):628-36. doi: 10.1016/j.canlet.2014.10.010. Epub 2014 Oct 16.


Reduction in carotenoid levels in the marine diatom Phaeodactylum tricornutum by artificial microRNAs targeted against the endogenous phytoene synthase gene.

Kaur S, Spillane C.

Mar Biotechnol (NY). 2015 Feb;17(1):1-7. doi: 10.1007/s10126-014-9593-9. Epub 2014 Sep 5.


An integrated analysis of the SOX2 microRNA response program in human pluripotent and nullipotent stem cell lines.

Vencken SF, Sethupathy P, Blackshields G, Spillane C, Elbaruni S, Sheils O, Gallagher MF, O'Leary JJ.

BMC Genomics. 2014 Aug 25;15:711. doi: 10.1186/1471-2164-15-711.


Imprinted loci in domestic livestock species as epigenomic targets for artificial selection of complex traits.

Magee DA, Spillane C, Berkowicz EW, Sikora KM, MacHugh DE.

Anim Genet. 2014 Aug;45 Suppl 1:25-39. doi: 10.1111/age.12168. Epub 2014 Jul 2. Review.


Next-generation sequencing based genotyping, cytometry and phenotyping for understanding diversity and evolution of Guinea yams.

Girma G, Hyma KE, Asiedu R, Mitchell SE, Gedil M, Spillane C.

Theor Appl Genet. 2014 Aug;127(8):1783-94. doi: 10.1007/s00122-014-2339-2. Epub 2014 Jul 1.


The MyD88+ phenotype is an adverse prognostic factor in epithelial ovarian cancer.

d'Adhemar CJ, Spillane CD, Gallagher MF, Bates M, Costello KM, Barry-O'Crowley J, Haley K, Kernan N, Murphy C, Smyth PC, O'Byrne K, Pennington S, Cooke AA, Ffrench B, Martin CM, O'Donnell D, Hennessy B, Stordal B, Finn S, McCann A, Gleeson N, D'Arcy T, Flood B, O'Neill LA, Sheils O, O'Toole S, O'Leary JJ.

PLoS One. 2014 Jun 30;9(6):e100816. doi: 10.1371/journal.pone.0100816. eCollection 2014. Erratum in: PLoS One. 2014;9(9):e108833.


African origin and europe-mediated global dispersal of the cyanobacterium Microcystis aeruginosa.

Moreira C, Spillane C, Fathalli A, Vasconcelos V, Antunes A.

Curr Microbiol. 2014 Nov;69(5):628-33. doi: 10.1007/s00284-014-0628-2. Epub 2014 Jun 21.


The emerging biofuel crop Camelina sativa retains a highly undifferentiated hexaploid genome structure.

Kagale S, Koh C, Nixon J, Bollina V, Clarke WE, Tuteja R, Spillane C, Robinson SJ, Links MG, Clarke C, Higgins EE, Huebert T, Sharpe AG, Parkin IA.

Nat Commun. 2014 Apr 23;5:3706. doi: 10.1038/ncomms4706.


Analysis of genomic imprinting by quantitative allele-specific expression by Pyrosequencing(®).

McKeown PC, Fort A, Spillane C.

Methods Mol Biol. 2014;1112:85-104. doi: 10.1007/978-1-62703-773-0_6.


Landscaping plant epigenetics.

McKeown PC, Spillane C.

Methods Mol Biol. 2014;1112:1-24. doi: 10.1007/978-1-62703-773-0_1. Review.


Marker-trait association analysis of functional gene markers for provitamin A levels across diverse tropical yellow maize inbred lines.

Azmach G, Gedil M, Menkir A, Spillane C.

BMC Plant Biol. 2013 Dec 28;13:227. doi: 10.1186/1471-2229-13-227.


Molecular adaptation of telomere associated genes in mammals.

Morgan CC, Mc Cartney AM, Donoghue MT, Loughran NB, Spillane C, Teeling EC, O'Connell MJ.

BMC Evol Biol. 2013 Nov 15;13:251. doi: 10.1186/1471-2148-13-251.


C(m)CGG methylation-independent parent-of-origin effects on genome-wide transcript levels in isogenic reciprocal F1 triploid plants.

Donoghue MT, Fort A, Clifton R, Zhang X, McKeown PC, Voigt-Zielinksi ML, Borevitz JO, Spillane C.

DNA Res. 2014;21(2):141-51. doi: 10.1093/dnares/dst046. Epub 2013 Nov 7.


An NTD-associated polymorphism in the 3' UTR of MTHFD1L can affect disease risk by altering miRNA binding.

Minguzzi S, Selcuklu SD, Spillane C, Parle-McDermott A.

Hum Mutat. 2014 Jan;35(1):96-104. doi: 10.1002/humu.22459.


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