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Items: 11

1.

A Single-Cell Transcriptome Atlas of the Aging Drosophila Brain.

Davie K, Janssens J, Koldere D, De Waegeneer M, Pech U, Kreft Ł, Aibar S, Makhzami S, Christiaens V, Bravo González-Blas C, Poovathingal S, Hulselmans G, Spanier KI, Moerman T, Vanspauwen B, Geurs S, Voet T, Lammertyn J, Thienpont B, Liu S, Konstantinides N, Fiers M, Verstreken P, Aerts S.

Cell. 2018 Aug 9;174(4):982-998.e20. doi: 10.1016/j.cell.2018.05.057. Epub 2018 Jun 18.

2.

Conserved Transcription Factors Steer Growth-Related Genomic Programs in Daphnia.

Spanier KI, Jansen M, Decaestecker E, Hulselmans G, Becker D, Colbourne JK, Orsini L, De Meester L, Aerts S.

Genome Biol Evol. 2017 Jun 1;9(6):1821-1842. doi: 10.1093/gbe/evx127.

3.

Early transcriptional response pathways in Daphnia magna are coordinated in networks of crustacean-specific genes.

Orsini L, Brown JB, Shams Solari O, Li D, He S, Podicheti R, Stoiber MH, Spanier KI, Gilbert D, Jansen M, Rusch DB, Pfrender ME, Colbourne JK, Frilander MJ, Kvist J, Decaestecker E, De Schamphelaere KAC, De Meester L.

Mol Ecol. 2018 Feb;27(4):886-897. doi: 10.1111/mec.14261. Epub 2017 Aug 19.

4.

Thermal tolerance in the keystone species Daphnia magna-a candidate gene and an outlier analysis approach.

Jansen M, Geerts AN, Rago A, Spanier KI, Denis C, De Meester L, Orsini L.

Mol Ecol. 2017 Apr;26(8):2291-2305. doi: 10.1111/mec.14040. Epub 2017 Mar 6.

PMID:
28146303
5.

Daphnia magna transcriptome by RNA-Seq across 12 environmental stressors.

Orsini L, Gilbert D, Podicheti R, Jansen M, Brown JB, Solari OS, Spanier KI, Colbourne JK, Rusch DB, Decaestecker E, Asselman J, De Schamphelaere KA, Ebert D, Haag CR, Kvist J, Laforsch C, Petrusek A, Beckerman AP, Little TJ, Chaturvedi A, Pfrender ME, De Meester L, Frilander MJ.

Sci Data. 2017 Jan 31;4:170006. doi: 10.1038/sdata.2017.6. No abstract available.

6.

Temporal genetic stability in natural populations of the waterflea Daphnia magna in response to strong selection pressure.

Orsini L, Marshall H, Cuenca Cambronero M, Chaturvedi A, Thomas KW, Pfrender ME, Spanier KI, De Meester L.

Mol Ecol. 2016 Dec;25(24):6024-6038. doi: 10.1111/mec.13907. Epub 2016 Nov 25.

PMID:
27862502
7.

Daphnia magna transcriptome by RNA-Seq across 12 environmental stressors.

Orsini L, Gilbert D, Podicheti R, Jansen M, Brown JB, Solari OS, Spanier KI, Colbourne JK, Rusch DB, Decaestecker E, Asselman J, De Schamphelaere KA, Ebert D, Haag CR, Kvist J, Laforsch C, Petrusek A, Beckerman AP, Little TJ, Chaturvedi A, Pfrender ME, De Meester L, Frilander MJ.

Sci Data. 2016 May 10;3:160030. doi: 10.1038/sdata.2016.30. Erratum in: Sci Data. 2017 Jan 31;4:170006. Rush, Douglas [corrected to Rusch, Douglas B].

8.

Prebiotic effects of arabinoxylan oligosaccharides on juvenile Siberian sturgeon (Acipenser baerii) with emphasis on the modulation of the gut microbiota using 454 pyrosequencing.

Geraylou Z, Souffreau C, Rurangwa E, Maes GE, Spanier KI, Courtin CM, Delcour JA, Buyse J, Ollevier F.

FEMS Microbiol Ecol. 2013 Nov;86(2):357-71. doi: 10.1111/1574-6941.12169. Epub 2013 Jul 17.

9.

Gene expression profiling of three different stressors in the water flea Daphnia magna.

Jansen M, Vergauwen L, Vandenbrouck T, Knapen D, Dom N, Spanier KI, Cielen A, De Meester L.

Ecotoxicology. 2013 Jul;22(5):900-14. doi: 10.1007/s10646-013-1072-y. Epub 2013 Apr 6.

PMID:
23564370
10.

Genomic signature of natural and anthropogenic stress in wild populations of the waterflea Daphnia magna: validation in space, time and experimental evolution.

Orsini L, Spanier KI, DE Meester L.

Mol Ecol. 2012 May;21(9):2160-75. doi: 10.1111/j.1365-294X.2011.05429.x. Epub 2012 Jan 18.

PMID:
22257313
11.

Predator-induced defences in Daphnia pulex: selection and evaluation of internal reference genes for gene expression studies with real-time PCR.

Spanier KI, Leese F, Mayer C, Colbourne JK, Gilbert D, Pfrender ME, Tollrian R.

BMC Mol Biol. 2010 Jun 29;11:50. doi: 10.1186/1471-2199-11-50.

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