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Setting Our Sights on Infectious Diseases.

De Rycker M, Horn D, Aldridge B, Amewu RK, Barry CE 3rd, Buckner FS, Cook S, Ferguson MAJ, Gobeau N, Herrmann J, Herrling P, Hope W, Keiser J, Lafuente-Monasterio MJ, Leeson PD, Leroy D, Manjunatha UH, McCarthy J, Miles TJ, Mizrahi V, Moshynets O, Niles J, Overington JP, Pottage J, Rao SPS, Read KD, Ribeiro I, Silver LL, Southern J, Spangenberg T, Sundar S, Taylor C, Van Voorhis W, White NJ, Wyllie S, Wyatt PG, Gilbert IH.

ACS Infect Dis. 2019 Dec 6. doi: 10.1021/acsinfecdis.9b00371. [Epub ahead of print]


Ethyl-for-methyl substitution enhances the subtype specificity of mecamylamine analogues.

Mangan D, McNabola N, Clark EH, Bermudez I, Wonnacott S, Southern JM.

Org Biomol Chem. 2019 Nov 27;17(46):9892-9905. doi: 10.1039/c9ob01993f.


Differences in nasal immunoglobulin A responses to influenza vaccine strains after live attenuated influenza vaccine (LAIV) immunization in children.

Turner PJ, Abdulla AF, Cole ME, Javan RR, Gould V, O'Driscoll ME, Southern J, Zambon M, Miller E, Andrews NJ, Höschler K, Tregoning JS.

Clin Exp Immunol. 2019 Oct 31. doi: 10.1111/cei.13395. [Epub ahead of print]


Viral Shedding in Recipients of Live Attenuated Influenza Vaccine in the 2016-2017 and 2017-2018 Influenza Seasons in the United Kingdom.

Jackson D, Pitcher M, Hudson C, Andrews N, Southern J, Ellis J, Höschler K, Pebody R, Turner PJ, Miller E, Zambon M.

Clin Infect Dis. 2019 Aug 13. pii: ciz719. doi: 10.1093/cid/ciz719. [Epub ahead of print]


Effectiveness of BCG vaccination against Mycobacterium tuberculosis infection in adults: a cross-sectional analysis of a UK-based cohort.

Katelaris AL, Jackson C, Southern J, Gupta RK, Drobniewski F, Lalvani A, Lipman M, Mangtani P, Abubakar I.

J Infect Dis. 2019 Aug 29. pii: jiz430. doi: 10.1093/infdis/jiz430. [Epub ahead of print]


The Genomics of Streptococcus Pneumoniae Carriage Isolates from UK Children and Their Household Contacts, Pre-PCV7 to Post-PCV13.

Sheppard CL, Groves N, Andrews N, Litt DJ, Fry NK, Southern J, Miller E.

Genes (Basel). 2019 Sep 6;10(9). pii: E687. doi: 10.3390/genes10090687.


Perioperative management of cold agglutinin autoimmune hemolytic anemia in an older adult undergoing radical cystectomy for bladder cancer.

Southern JB, Bhattacharya P, Clifton MM, Park A, Meissner MA, Mori RL.

Urol Case Rep. 2019 Aug 13;27:100998. doi: 10.1016/j.eucr.2019.100998. eCollection 2019 Nov.


Letter to the Editor RE: Meller, Editorial Comment on: Risk Factors for Postoperative Fever and Systemic Inflammatory Response Syndrome After Ureteroscopy for Stone Disease by Southern et al. (From: Meller A. J Endourol 2019;33:523-524; DOI: 10.1089/end.2019.0206).

Southern JB, Higgins AM, Young AJ, Kost KA, Schreiter BR, Clifton M, Fulmer BR, Garg T.

J Endourol. 2019 Jul;33(7):525-526. doi: 10.1089/end.2019.29058.jbs. Epub 2019 Jun 24. No abstract available.


Durability of the neutralizing antibody response to vaccine and non-vaccine HPV types 7 years following immunization with either Cervarix® or Gardasil® vaccine.

Godi A, Panwar K, Haque M, Cocuzza CE, Andrews N, Southern J, Turner P, Miller E, Beddows S.

Vaccine. 2019 Apr 24;37(18):2455-2462. doi: 10.1016/j.vaccine.2019.03.052. Epub 2019 Mar 27.


Blood transcriptomic stratification of short-term risk in contacts of tuberculosis.

Roe J, Venturini C, Gupta RK, Gurry C, Chain BM, Sun Y, Southern J, Jackson C, Lipman MC, Miller RF, Martineau AR, Abubakar I, Noursadeghi M.

Clin Infect Dis. 2019 Mar 28. pii: ciz252. doi: 10.1093/cid/ciz252. [Epub ahead of print]


A Case of Primary Paratesticular Wilms Tumor in an Undescended Testis.

Groth TW, Southern J, Goetz JT, Farooq A.

Urology. 2019 Jul;129:197-199. doi: 10.1016/j.urology.2018.12.024. Epub 2019 Jan 2.


Risk Factors for Postoperative Fever and Systemic Inflammatory Response Syndrome After Ureteroscopy for Stone Disease.

Southern JB, Higgins AM, Young AJ, Kost KA, Schreiter BR, Clifton M, Fulmer BR, Garg T.

J Endourol. 2019 Jul;33(7):516-522. doi: 10.1089/end.2018.0789. Epub 2019 Jan 22.


Discordance in latent tuberculosis (TB) test results in patients with end-stage renal disease.

Southern J, Sridhar S, Tsou CY, Hopkins S, Collier S, Nikolayevskyy V, Lozewicz S, Lalvani A, Abubakar I, Lipman M.

Public Health. 2019 Jan;166:34-39. doi: 10.1016/j.puhe.2018.09.023. Epub 2018 Nov 12.


Two interferon gamma release assays for predicting active tuberculosis: the UK PREDICT TB prognostic test study.

Abubakar I, Lalvani A, Southern J, Sitch A, Jackson C, Onyimadu O, Lipman M, Deeks JJ, Griffiths C, Bothamley G, Kon OM, Hayward A, Lord J, Drobniewski F.

Health Technol Assess. 2018 Oct;22(56):1-96. doi: 10.3310/hta22560.



Bart NK, Hungerford SL, Curtis MK, Cheng HY, Southern JL, Petousi N, Dorrington KL, Robbins PA.

J Appl Physiol (1985). 2018 Sep 6. doi: 10.1152/japplphysiol.00339.2018. [Epub ahead of print]


Prognostic value of interferon-γ release assays and tuberculin skin test in predicting the development of active tuberculosis (UK PREDICT TB): a prospective cohort study.

Abubakar I, Drobniewski F, Southern J, Sitch AJ, Jackson C, Lipman M, Deeks JJ, Griffiths C, Bothamley G, Lynn W, Burgess H, Mann B, Imran A, Sridhar S, Tsou CY, Nikolayevskyy V, Rees-Roberts M, Whitworth H, Kon OM, Haldar P, Kunst H, Anderson S, Hayward A, Watson JM, Milburn H, Lalvani A; PREDICT Study Team.

Lancet Infect Dis. 2018 Oct;18(10):1077-1087. doi: 10.1016/S1473-3099(18)30355-4. Epub 2018 Aug 30.


Pneumococcal carriage in children and their household contacts six years after introduction of the 13-valent pneumococcal conjugate vaccine in England.

Southern J, Andrews N, Sandu P, Sheppard CL, Waight PA, Fry NK, Van Hoek AJ, Miller E.

PLoS One. 2018 May 25;13(5):e0195799. doi: 10.1371/journal.pone.0195799. eCollection 2018.


Diabetes mellitus and latent tuberculosis infection: baseline analysis of a large UK cohort.

Jackson C, Southern J, Lalvani A, Drobniewski F, Griffiths CJ, Lipman M, Bothamley GH, Deeks JJ, Imran A, Kon OM, Mpofu S, Nikolayevskyy V, Rees-Roberts M, Sitch A, Sridhar S, Tsou CY, Whitworth H, Abubakar I.

Thorax. 2019 Jan;74(1):91-94. doi: 10.1136/thoraxjnl-2017-211124. Epub 2018 May 15.


Responses to live attenuated influenza vaccine in children vaccinated previously with Pandemrix (ASO3B adjuvanted pandemic A/H1N1pdm09).

Höschler K, Southern J, Thompson C, Warburton F, Andrews NJ, Miller E, Zambon M.

Vaccine. 2018 May 17;36(21):3034-3040. doi: 10.1016/j.vaccine.2018.04.017. Epub 2018 Apr 19.


Australian nursing students' knowledge and attitudes towards pressure injury prevention: A cross-sectional study.

Usher K, Woods C, Brown J, Power T, Lea J, Hutchinson M, Mather C, Miller A, Saunders A, Mills J, Zhao L, Yates K, Bodak M, Southern J, Jackson D.

Int J Nurs Stud. 2018 May;81:14-20. doi: 10.1016/j.ijnurstu.2018.01.015. Epub 2018 Feb 2.


Report on eighth WHO meeting on development of influenza vaccines that induce broadly protective and long-lasting immune responses: Chicago, USA, 23-24 August 2016.

Ortiz JR, Hickling J, Jones R, Donabedian A, Engelhardt OG, Katz JM, Madhi SA, Neuzil KM, Rimmelzwaan GF, Southern J, Spiro DJ, Hombach J.

Vaccine. 2018 Feb 8;36(7):932-938. doi: 10.1016/j.vaccine.2017.11.061. Epub 2017 Dec 6.


Pneumococcal conjugate vaccine 13 delivered as one primary and one booster dose (1 + 1) compared with two primary doses and a booster (2 + 1) in UK infants: a multicentre, parallel group randomised controlled trial.

Goldblatt D, Southern J, Andrews NJ, Burbidge P, Partington J, Roalfe L, Valente Pinto M, Thalasselis V, Plested E, Richardson H, Snape MD, Miller E.

Lancet Infect Dis. 2018 Feb;18(2):171-179. doi: 10.1016/S1473-3099(17)30654-0. Epub 2017 Nov 22.


A Lady 'in Proper Proportions'? Feminism, Lytton Strachey, and Florence Nightingale's Reputation, 1918-39.

Southern J.

20 Century Br Hist. 2017 Mar 1;28(1):1-28. doi: 10.1093/tcbh/hww047.


A fresh approach to OSCE assessment at the University of Nottingham.

Southern J, Ackbarally Y, Montgomery C.

Med Teach. 2017 Dec;39(12):1291. doi: 10.1080/0142159X.2017.1367376. Epub 2017 Aug 22. No abstract available.


Off-label use of vaccines.

Neels P, Southern J, Abramson J, Duclos P, Hombach J, Marti M, Fitzgerald-Husek A, Fournier-Caruana J, Hanquet G.

Vaccine. 2017 Apr 25;35(18):2329-2337. doi: 10.1016/j.vaccine.2017.02.056. Epub 2017 Mar 22. Review.


Reactogenicity of Cervarix and Gardasil human papillomavirus (HPV) vaccines in a randomized single blind trial in healthy UK adolescent females.

Haskins-Coulter T, Southern J, Andrews N, Miller E.

Hum Vaccin Immunother. 2017 Jun 3;13(6):1-9. doi: 10.1080/21645515.2016.1277846. Epub 2017 Mar 20.


In vivo modification of tRNA with an artificial nucleobase leads to full disease remission in an animal model of multiple sclerosis.

Varghese S, Cotter M, Chevot F, Fergus C, Cunningham C, Mills KH, Connon SJ, Southern JM, Kelly VP.

Nucleic Acids Res. 2017 Feb 28;45(4):2029-2039. doi: 10.1093/nar/gkw847.


Extensive swelling of the limb and systemic symptoms after a fourth dose of acellular pertussis containing vaccines in England in children aged 3-6years.

Southern J, Waight PA, Andrews N, Miller E.

Vaccine. 2017 Jan 23;35(4):619-625. doi: 10.1016/j.vaccine.2016.12.017. Epub 2016 Dec 23.


A new synthesis and preliminary evaluation of some analogues of mecamylamine - a compound with anti-addiction properties.

Mangan D, McNabola N, Clark EH, Bermudez I, Wonnacott S, Southern JM.

Org Biomol Chem. 2016 Nov 22;14(46):10787-10798.


A multi-perspective service evaluation exploring tuberculosis contact screening attendance among adults at a North London hospital.

MacLellan J, Wallace K, Vacchelli E, Roe J, Davidson R, Abubakar I, Southern J.

J Public Health (Oxf). 2016 Sep;38(3):e362-e367. Epub 2015 Sep 12.


Undergraduate student nurses' self-reported preparedness for practice.

Woods C, West C, Mills J, Park T, Southern J, Usher K.

Collegian. 2015;22(4):359-68.


Safety of live attenuated influenza vaccine in young people with egg allergy: multicentre prospective cohort study.

Turner PJ, Southern J, Andrews NJ, Miller E, Erlewyn-Lajeunesse M; SNIFFLE-2 Study Investigators.

BMJ. 2015 Dec 8;351:h6291. doi: 10.1136/bmj.h6291.


Simulating Cardiac Electrophysiology Using Unstructured All-Hexahedra Spectral Elements.

Cuccuru G, Fotia G, Maggio F, Southern J.

Biomed Res Int. 2015;2015:473279. doi: 10.1155/2015/473279. Epub 2015 Oct 25.


Antibody responses after primary immunization in infants born to women receiving a pertussis-containing vaccine during pregnancy: single arm observational study with a historical comparator.

Ladhani SN, Andrews NJ, Southern J, Jones CE, Amirthalingam G, Waight PA, England A, Matheson M, Bai X, Findlow H, Burbidge P, Thalasselis V, Hallis B, Goldblatt D, Borrow R, Heath PT, Miller E.

Clin Infect Dis. 2015 Dec 1;61(11):1637-44. doi: 10.1093/cid/civ695. Epub 2015 Sep 15. Erratum in: Clin Infect Dis. 2016 Jun 15;62(12 ):1621.


Varied utilisation of health provision by Arab and Jewish residents in Israel.

Southern J, Roizin H, Daana M, Rubin C, Hasleton S, Cohen A, Goral A, Rahav G, Raz M, Regev-Yochay G; PICR group.

Int J Equity Health. 2015 Aug 7;14:63. doi: 10.1186/s12939-015-0193-8.


Randomized Trial to Compare the Immunogenicity and Safety of a CRM or TT Conjugated Quadrivalent Meningococcal Vaccine in Teenagers who Received a CRM or TT Conjugated Serogroup C Vaccine at Preschool Age.

Ishola DA, Andrews N, Waight P, Yung CF, Southern J, Bai X, Findlow H, Matheson M, England A, Hallis B, Findlow J, Borrow R, Miller E.

Pediatr Infect Dis J. 2015 Aug;34(8):865-74. doi: 10.1097/INF.0000000000000750.


Risk factors for the misdiagnosis of tuberculosis in the UK, 2001-2011.

Pedrazzoli D, Abubakar I, Potts H, Hunter PR, Kruijshaar ME, Kon OM, Southern J.

Eur Respir J. 2015 Aug;46(2):564-7. doi: 10.1183/09031936.00227914. Epub 2015 Apr 16. No abstract available.


BAG3 myofibrillar myopathy presenting with cardiomyopathy.

Konersman CG, Bordini BJ, Scharer G, Lawlor MW, Zangwill S, Southern JF, Amos L, Geddes GC, Kliegman R, Collins MP.

Neuromuscul Disord. 2015 May;25(5):418-22. doi: 10.1016/j.nmd.2015.01.009. Epub 2015 Feb 4.


T-cell/histiocyte-rich large B-cell lymphoma in pediatric patients: an under-recognized entity?

Gheorghe G, Rangarajan HG, Camitta B, Segura A, Kroft S, Southern JF.

Ann Clin Lab Sci. 2015 Winter;45(1):73-8.


Safety of live attenuated influenza vaccine in atopic children with egg allergy.

Turner PJ, Southern J, Andrews NJ, Miller E, Erlewyn-Lajeunesse M; SNIFFLE Study Investigators.

J Allergy Clin Immunol. 2015 Aug;136(2):376-81. doi: 10.1016/j.jaci.2014.12.1925. Epub 2015 Feb 13.


A novel FOXF1 mutation associated with alveolar capillary dysplasia and coexisting colobomas and hemihyperplasia.

Geddes GC, Dimmock DP, Hehir DA, Helbling DC, Kirkpatrick E, Loomba R, Southern J, Waknitz M, Scharer G, Konduri GG.

J Perinatol. 2015 Feb;35(2):155-7. doi: 10.1038/jp.2014.187.


Traumatic labial bladder diverticulum and vesico-vulvar fistula.

Milton SH, Dolat ME, Southern JB, Orton V, Klausner AP, Gill EJ.

Female Pelvic Med Reconstr Surg. 2015 May-Jun;21(3):e30-2. doi: 10.1097/SPV.0000000000000153.


Evaluation of the safety and immunogenicity in United Kingdom laboratory workers of a combined Haemophilus influenzae type b and meningococcal capsular group C conjugate vaccine.

Findlow J, Findlow H, Frankland S, Holland A, Holme D, Newton E, Southern J, Waight P, Kaczmarski E, Miller E, Borrow R.

J Occup Med Toxicol. 2014 Jul 16;9:26. doi: 10.1186/1745-6673-9-26. eCollection 2014.


Alveolar capillary dysplasia with multiple congenital anomalies and bronchoscopic airway abnormalities.

Bellamkonda-Athmaram V, Sulman CG, Basel DG, Southern J, Konduri GG, Basir MA.

J Perinatol. 2014 Apr;34(4):326-8. doi: 10.1038/jp.2013.175.


Congenital cardiac, aortic arch, and vascular bed anomalies in PHACE syndrome (from the International PHACE Syndrome Registry).

Bayer ML, Frommelt PC, Blei F, Breur JM, Cordisco MR, Frieden IJ, Goddard DS, Holland KE, Krol AL, Maheshwari M, Metry DW, Morel KD, North PE, Pope E, Shieh JT, Southern JF, Wargon O, Siegel DH, Drolet BA.

Am J Cardiol. 2013 Dec 15;112(12):1948-52. doi: 10.1016/j.amjcard.2013.08.025. Epub 2013 Sep 28.


Prevalence of pediatric aspiration-associated extraesophageal reflux disease.

Kelly EA, Parakininkas DE, Werlin SL, Southern JF, Johnston N, Kerschner JE.

JAMA Otolaryngol Head Neck Surg. 2013 Oct;139(10):996-1001.


cisExpress: motif detection in DNA sequences.

Triska M, Grocutt D, Southern J, Murphy DJ, Tatarinova T.

Bioinformatics. 2013 Sep 1;29(17):2203-5. doi: 10.1093/bioinformatics/btt366. Epub 2013 Jun 21.


A global regulatory science agenda for vaccines.

Elmgren L, Li X, Wilson C, Ball R, Wang J, Cichutek K, Pfleiderer M, Kato A, Cavaleri M, Southern J, Jivapaisarnpong T, Minor P, Griffiths E, Sohn Y, Wood D.

Vaccine. 2013 Apr 18;31 Suppl 2:B163-75. doi: 10.1016/j.vaccine.2012.10.117. Review.


Active case finding for tuberculosis among high-risk groups in low-incidence countries.

Zenner D, Southern J, van Hest R, DeVries G, Stagg HR, Antoine D, Abubakar I.

Int J Tuberc Lung Dis. 2013 May;17(5):573-82. doi: 10.5588/ijtld.12.0920. Review.


Chaste: an open source C++ library for computational physiology and biology.

Mirams GR, Arthurs CJ, Bernabeu MO, Bordas R, Cooper J, Corrias A, Davit Y, Dunn SJ, Fletcher AG, Harvey DG, Marsh ME, Osborne JM, Pathmanathan P, Pitt-Francis J, Southern J, Zemzemi N, Gavaghan DJ.

PLoS Comput Biol. 2013;9(3):e1002970. doi: 10.1371/journal.pcbi.1002970. Epub 2013 Mar 14.

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