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A Conserved Regulatory Circuit Controls Large Adhesins in Vibrio cholerae.

Kitts G, Giglio KM, Zamorano-Sánchez D, Park JH, Townsley L, Cooley RB, Wucher BR, Klose KE, Nadell CD, Yildiz FH, Sondermann H.

mBio. 2019 Dec 3;10(6). pii: e02822-19. doi: 10.1128/mBio.02822-19.


Signal Sensing and Transduction Are Conserved between the Periplasmic Sensory Domains of BifA and SagS.

Dingemans J, Al-Feghali RE, Sondermann H, Sauer K.

mSphere. 2019 Jul 31;4(4). pii: e00442-19. doi: 10.1128/mSphere.00442-19.


A dedicated diribonucleotidase resolves a key bottleneck for the terminal step of RNA degradation.

Kim SK, Lormand JD, Weiss CA, Eger KA, Turdiev H, Turdiev A, Winkler WC, Sondermann H, Lee VT.

Elife. 2019 Jun 21;8. pii: e46313. doi: 10.7554/eLife.46313.


Co-opting the Lap System of Pseudomonas fluorescens To Reversibly Customize Bacterial Cell Surfaces.

Smith TJ, Sondermann H, O'Toole GA.

ACS Synth Biol. 2018 Nov 16;7(11):2612-2617. doi: 10.1021/acssynbio.8b00278. Epub 2018 Oct 16.


Ligand-Mediated Biofilm Formation via Enhanced Physical Interaction between a Diguanylate Cyclase and Its Receptor.

Giacalone D, Smith TJ, Collins AJ, Sondermann H, Koziol LJ, O'Toole GA.

mBio. 2018 Jul 10;9(4). pii: e01254-18. doi: 10.1128/mBio.01254-18.


Type 1 Does the Two-Step: Type 1 Secretion Substrates with a Functional Periplasmic Intermediate.

Smith TJ, Sondermann H, O'Toole GA.

J Bacteriol. 2018 Aug 24;200(18). pii: e00168-18. doi: 10.1128/JB.00168-18. Print 2018 Sep 15. Review.


The Yin and Yang of SagS: Distinct Residues in the HmsP Domain of SagS Independently Regulate Biofilm Formation and Biofilm Drug Tolerance.

Dingemans J, Poudyal B, Sondermann H, Sauer K.

mSphere. 2018 May 30;3(3). pii: e00192-18. doi: 10.1128/mSphere.00192-18. Print 2018 Jun 27.


An N-Terminal Retention Module Anchors the Giant Adhesin LapA of Pseudomonas fluorescens at the Cell Surface: a Novel Subfamily of Type I Secretion Systems.

Smith TJ, Font ME, Kelly CM, Sondermann H, O'Toole GA.

J Bacteriol. 2018 Mar 26;200(8). pii: e00734-17. doi: 10.1128/JB.00734-17. Print 2018 Apr 15.


Disrupted Hydrogen-Bond Network and Impaired ATPase Activity in an Hsc70 Cysteine Mutant.

O'Donnell JP, Marsh HM, Sondermann H, Sevier CS.

Biochemistry. 2018 Feb 20;57(7):1073-1086. doi: 10.1021/acs.biochem.7b01005. Epub 2018 Feb 1.


A hereditary spastic paraplegia-associated atlastin variant exhibits defective allosteric coupling in the catalytic core.

O'Donnell JP, Byrnes LJ, Cooley RB, Sondermann H.

J Biol Chem. 2018 Jan 12;293(2):687-700. doi: 10.1074/jbc.RA117.000380. Epub 2017 Nov 27.


Probing Protein-Protein Interactions with Genetically Encoded Photoactivatable Cross-Linkers.

Cooley RB, Sondermann H.

Methods Mol Biol. 2017;1657:331-345. doi: 10.1007/978-1-4939-7240-1_26.


Timing and Reset Mechanism of GTP Hydrolysis-Driven Conformational Changes of Atlastin.

O'Donnell JP, Cooley RB, Kelly CM, Miller K, Andersen OS, Rusinova R, Sondermann H.

Structure. 2017 Jul 5;25(7):997-1010.e4. doi: 10.1016/j.str.2017.05.007. Epub 2017 Jun 9.


Versatile modes of cellular regulation via cyclic dinucleotides.

Krasteva PV, Sondermann H.

Nat Chem Biol. 2017 Mar 22;13(4):350-359. doi: 10.1038/nchembio.2337. Review.


Accepted standards on how to give a Medical Research Presentation: a systematic review of expert opinion papers.

Blome C, Sondermann H, Augustin M.

GMS J Med Educ. 2017 Feb 15;34(1):Doc11. doi: 10.3205/zma001088. eCollection 2017. Review.


The ins and outs of cyclic di-GMP signaling in Vibrio cholerae.

Conner JG, Zamorano-Sánchez D, Park JH, Sondermann H, Yildiz FH.

Curr Opin Microbiol. 2017 Apr;36:20-29. doi: 10.1016/j.mib.2017.01.002. Epub 2017 Feb 5. Review.


Coincidence detection and bi-directional transmembrane signaling control a bacterial second messenger receptor.

Cooley RB, O'Donnell JP, Sondermann H.

Elife. 2016 Dec 21;5. pii: e21848. doi: 10.7554/eLife.21848.


The Inhibitory Site of a Diguanylate Cyclase Is a Necessary Element for Interaction and Signaling with an Effector Protein.

Dahlstrom KM, Giglio KM, Sondermann H, O'Toole GA.

J Bacteriol. 2016 May 13;198(11):1595-603. doi: 10.1128/JB.00090-16. Print 2016 Jun 1.


Data publication with the structural biology data grid supports live analysis.

Meyer PA, Socias S, Key J, Ransey E, Tjon EC, Buschiazzo A, Lei M, Botka C, Withrow J, Neau D, Rajashankar K, Anderson KS, Baxter RH, Blacklow SC, Boggon TJ, Bonvin AM, Borek D, Brett TJ, Caflisch A, Chang CI, Chazin WJ, Corbett KD, Cosgrove MS, Crosson S, Dhe-Paganon S, Di Cera E, Drennan CL, Eck MJ, Eichman BF, Fan QR, Ferré-D'Amaré AR, Fromme JC, Garcia KC, Gaudet R, Gong P, Harrison SC, Heldwein EE, Jia Z, Keenan RJ, Kruse AC, Kvansakul M, McLellan JS, Modis Y, Nam Y, Otwinowski Z, Pai EF, Pereira PJ, Petosa C, Raman CS, Rapoport TA, Roll-Mecak A, Rosen MK, Rudenko G, Schlessinger J, Schwartz TU, Shamoo Y, Sondermann H, Tao YJ, Tolia NH, Tsodikov OV, Westover KD, Wu H, Foster I, Fraser JS, Maia FR, Gonen T, Kirchhausen T, Diederichs K, Crosas M, Sliz P.

Nat Commun. 2016 Mar 7;7:10882. doi: 10.1038/ncomms10882.


Mechanistic insights into c-di-GMP-dependent control of the biofilm regulator FleQ from Pseudomonas aeruginosa.

Matsuyama BY, Krasteva PV, Baraquet C, Harwood CS, Sondermann H, Navarro MV.

Proc Natl Acad Sci U S A. 2016 Jan 12;113(2):E209-18. doi: 10.1073/pnas.1523148113. Epub 2015 Dec 28.


Contribution of Physical Interactions to Signaling Specificity between a Diguanylate Cyclase and Its Effector.

Dahlstrom KM, Giglio KM, Collins AJ, Sondermann H, O'Toole GA.

mBio. 2015 Dec 15;6(6):e01978-15. doi: 10.1128/mBio.01978-15.


Cyclic Di-GMP-Regulated Periplasmic Proteolysis of a Pseudomonas aeruginosa Type Vb Secretion System Substrate.

Cooley RB, Smith TJ, Leung W, Tierney V, Borlee BR, O'Toole GA, Sondermann H.

J Bacteriol. 2015 Jun 22;198(1):66-76. doi: 10.1128/JB.00369-15. Print 2016 Jan 1.


Mechanistic insight into the conserved allosteric regulation of periplasmic proteolysis by the signaling molecule cyclic-di-GMP.

Chatterjee D, Cooley RB, Boyd CD, Mehl RA, O'Toole GA, Sondermann H.

Elife. 2014 Sep 2;3:e03650. doi: 10.7554/eLife.03650.


Ferromagnetic nanoparticles with peroxidase-like activity enhance the cleavage of biological macromolecules for biofilm elimination.

Gao L, Giglio KM, Nelson JL, Sondermann H, Travis AJ.

Nanoscale. 2014 Mar 7;6(5):2588-93. doi: 10.1039/c3nr05422e. Epub 2014 Jan 27.


GTP-dependent membrane fusion.

McNew JA, Sondermann H, Lee T, Stern M, Brandizzi F.

Annu Rev Cell Dev Biol. 2013;29:529-50. doi: 10.1146/annurev-cellbio-101512-122328. Epub 2013 Jul 15. Review.


Structural basis for biofilm formation via the Vibrio cholerae matrix protein RbmA.

Giglio KM, Fong JC, Yildiz FH, Sondermann H.

J Bacteriol. 2013 Jul;195(14):3277-86. doi: 10.1128/JB.00374-13. Epub 2013 May 17.


Structural basis for conformational switching and GTP loading of the large G protein atlastin.

Byrnes LJ, Singh A, Szeto K, Benvin NM, O'Donnell JP, Zipfel WR, Sondermann H.

EMBO J. 2013 Feb 6;32(3):369-84. doi: 10.1038/emboj.2012.353. Epub 2013 Jan 18.


Versatile membrane deformation potential of activated pacsin.

Goh SL, Wang Q, Byrnes LJ, Sondermann H.

PLoS One. 2012;7(12):e51628. doi: 10.1371/journal.pone.0051628. Epub 2012 Dec 7.


LapG, required for modulating biofilm formation by Pseudomonas fluorescens Pf0-1, is a calcium-dependent protease.

Boyd CD, Chatterjee D, Sondermann H, O'Toole GA.

J Bacteriol. 2012 Aug;194(16):4406-14. doi: 10.1128/JB.00642-12. Epub 2012 Jun 15.


Structural characterization of a conserved, calcium-dependent periplasmic protease from Legionella pneumophila.

Chatterjee D, Boyd CD, O'Toole GA, Sondermann H.

J Bacteriol. 2012 Aug;194(16):4415-25. doi: 10.1128/JB.00640-12. Epub 2012 Jun 15.


Sensing the messenger: the diverse ways that bacteria signal through c-di-GMP.

Krasteva PV, Giglio KM, Sondermann H.

Protein Sci. 2012 Jul;21(7):929-48. doi: 10.1002/pro.2093. Epub 2012 Jun 5. Review.


Single molecule kinetics of ENTH binding to lipid membranes.

Rozovsky S, Forstner MB, Sondermann H, Groves JT.

J Phys Chem B. 2012 May 3;116(17):5122-31. doi: 10.1021/jp210045r. Epub 2012 Apr 19.


You've come a long way: c-di-GMP signaling.

Sondermann H, Shikuma NJ, Yildiz FH.

Curr Opin Microbiol. 2012 Apr;15(2):140-6. doi: 10.1016/j.mib.2011.12.008. Epub 2012 Jan 5. Review.


Molecular mechanism of a green-shifted, pH-dependent red fluorescent protein mKate variant.

Wang Q, Byrnes LJ, Shui B, Röhrig UF, Singh A, Chudakov DM, Lukyanov S, Zipfel WR, Kotlikoff MI, Sondermann H.

PLoS One. 2011;6(8):e23513. doi: 10.1371/journal.pone.0023513. Epub 2011 Aug 22.


The metalloprotease of Listeria monocytogenes is regulated by pH.

Forster BM, Bitar AP, Slepkov ER, Kota KJ, Sondermann H, Marquis H.

J Bacteriol. 2011 Oct;193(19):5090-7. doi: 10.1128/JB.05134-11. Epub 2011 Jul 29.


Circular permutation of red fluorescent proteins.

Shui B, Wang Q, Lee F, Byrnes LJ, Chudakov DM, Lukyanov SA, Sondermann H, Kotlikoff MI.

PLoS One. 2011;6(5):e20505. doi: 10.1371/journal.pone.0020505. Epub 2011 May 27.


Structural basis for c-di-GMP-mediated inside-out signaling controlling periplasmic proteolysis.

Navarro MV, Newell PD, Krasteva PV, Chatterjee D, Madden DR, O'Toole GA, Sondermann H.

PLoS Biol. 2011 Feb 1;9(2):e1000588. doi: 10.1371/journal.pbio.1000588.


A c-di-GMP effector system controls cell adhesion by inside-out signaling and surface protein cleavage.

Newell PD, Boyd CD, Sondermann H, O'Toole GA.

PLoS Biol. 2011 Feb 1;9(2):e1000587. doi: 10.1371/journal.pbio.1000587.


Structural basis for the nucleotide-dependent dimerization of the large G protein atlastin-1/SPG3A.

Byrnes LJ, Sondermann H.

Proc Natl Acad Sci U S A. 2011 Feb 8;108(6):2216-21. doi: 10.1073/pnas.1012792108. Epub 2011 Jan 10.


Biophysical assays for protein interactions in the Wsp sensory system and biofilm formation.

De N, Navarro MV, Wang Q, Krasteva PV, Sondermann H.

Methods Enzymol. 2010;471:161-84. doi: 10.1016/S0076-6879(10)71010-7. Epub 2010 Mar 1.


Vibrio cholerae VpsT regulates matrix production and motility by directly sensing cyclic di-GMP.

Krasteva PV, Fong JC, Shikuma NJ, Beyhan S, Navarro MV, Yildiz FH, Sondermann H.

Science. 2010 Feb 12;327(5967):866-8. doi: 10.1126/science.1181185.


Role of the histone domain in the autoinhibition and activation of the Ras activator Son of Sevenless.

Gureasko J, Kuchment O, Makino DL, Sondermann H, Bar-Sagi D, Kuriyan J.

Proc Natl Acad Sci U S A. 2010 Feb 23;107(8):3430-5. doi: 10.1073/pnas.0913915107. Epub 2010 Feb 4.


Determinants for the activation and autoinhibition of the diguanylate cyclase response regulator WspR.

De N, Navarro MV, Raghavan RV, Sondermann H.

J Mol Biol. 2009 Oct 30;393(3):619-33. doi: 10.1016/j.jmb.2009.08.030. Epub 2009 Aug 18.


Structural analysis of the GGDEF-EAL domain-containing c-di-GMP receptor FimX.

Navarro MV, De N, Bae N, Wang Q, Sondermann H.

Structure. 2009 Aug 12;17(8):1104-16. doi: 10.1016/j.str.2009.06.010.


Molecular mechanism of membrane constriction and tubulation mediated by the F-BAR protein Pacsin/Syndapin.

Wang Q, Navarro MV, Peng G, Molinelli E, Goh SL, Judson BL, Rajashankar KR, Sondermann H.

Proc Natl Acad Sci U S A. 2009 Aug 4;106(31):12700-5. doi: 10.1073/pnas.0902974106. Epub 2009 Jun 19.


Mechanisms of antagonism of the GluR2 AMPA receptor: structure and dynamics of the complex of two willardiine antagonists with the glutamate binding domain.

Ahmed AH, Thompson MD, Fenwick MK, Romero B, Loh AP, Jane DE, Sondermann H, Oswald RE.

Biochemistry. 2009 May 12;48(18):3894-903. doi: 10.1021/bi900107m.


Differences in flexibility underlie functional differences in the Ras activators son of sevenless and Ras guanine nucleotide releasing factor 1.

Freedman TS, Sondermann H, Kuchment O, Friedland GD, Kortemme T, Kuriyan J.

Structure. 2009 Jan 14;17(1):41-53. doi: 10.1016/j.str.2008.11.004.


Structural basis for calcium sensing by GCaMP2.

Wang Q, Shui B, Kotlikoff MI, Sondermann H.

Structure. 2008 Dec 10;16(12):1817-27. doi: 10.1016/j.str.2008.10.008.


Structure of the S1S2 glutamate binding domain of GLuR3.

Ahmed AH, Wang Q, Sondermann H, Oswald RE.

Proteins. 2009 May 15;75(3):628-37. doi: 10.1002/prot.22274.


Structure and plasticity of Endophilin and Sorting Nexin 9.

Wang Q, Kaan HY, Hooda RN, Goh SL, Sondermann H.

Structure. 2008 Oct 8;16(10):1574-87. doi: 10.1016/j.str.2008.07.016.


Membrane-dependent signal integration by the Ras activator Son of sevenless.

Gureasko J, Galush WJ, Boykevisch S, Sondermann H, Bar-Sagi D, Groves JT, Kuriyan J.

Nat Struct Mol Biol. 2008 May;15(5):452-61. doi: 10.1038/nsmb.1418. Epub 2008 May 4. Erratum in: Nat Struct Mol Biol.2008 Jun;15(6): 651.

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