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New Gene Origin and Deep Taxon Phylogenomics: Opportunities and Challenges.

Rödelsperger C, Prabh N, Sommer RJ.

Trends Genet. 2019 Dec;35(12):914-922. doi: 10.1016/j.tig.2019.08.007. Epub 2019 Oct 11. Review.


Cilia drive developmental plasticity and are essential for efficient prey detection in predatory nematodes.

Moreno E, Lightfoot JW, Lenuzzi M, Sommer RJ.

Proc Biol Sci. 2019 Oct 9;286(1912):20191089. doi: 10.1098/rspb.2019.1089. Epub 2019 Oct 2.


Evolution of neuronal anatomy and circuitry in two highly divergent nematode species.

Hong RL, Riebesell M, Bumbarger DJ, Cook SJ, Carstensen HR, Sarpolaki T, Cochella L, Castrejon J, Moreno E, Sieriebriennikov B, Hobert O, Sommer RJ.

Elife. 2019 Sep 17;8. pii: e47155. doi: 10.7554/eLife.47155.


Two new Species of Pristionchus (Nematoda: Diplogastridae) include the Gonochoristic Sister Species of P. fissidentatus.

Herrmann M, Kanzaki N, Weiler C, Yoshida K, RÖdelsperger C, Sommer RJ.

J Nematol. 2019;51:1-14. doi: 10.21307/jofnem-2019-024.


Small peptide-mediated self-recognition prevents cannibalism in predatory nematodes.

Lightfoot JW, Wilecki M, Rödelsperger C, Moreno E, Susoy V, Witte H, Sommer RJ.

Science. 2019 Apr 5;364(6435):86-89. doi: 10.1126/science.aav9856.


Tricuspid Valve Imaging and Intervention in Pediatric and Adult Patients With Congenital Heart Disease.

Qureshi MY, Sommer RJ, Cabalka AK.

JACC Cardiovasc Imaging. 2019 Apr;12(4):637-651. doi: 10.1016/j.jcmg.2018.10.036. Review.


Adult Influence on Juvenile Phenotypes by Stage-Specific Pheromone Production.

Werner MS, Claaßen MH, Renahan T, Dardiry M, Sommer RJ.

iScience. 2018 Dec 21;10:123-134. doi: 10.1016/j.isci.2018.11.027. Epub 2018 Nov 20.


Ticagrelor for Refractory Migraine/Patent Foramen Ovale (TRACTOR): An open-label pilot study.

Reisman AM, Robbins BT, Chou DE, Yugrakh MS, Gross GJ, Privitera L, Nazif T, Sommer RJ.

Neurology. 2018 Nov 27;91(22):1010-1017. doi: 10.1212/WNL.0000000000006573.


Retrospective review of thienopyridine therapy in migraineurs with patent foramen ovale.

Sommer RJ, Nazif T, Privitera L, Robbins BT.

Neurology. 2018 Nov 27;91(22):1002-1009. doi: 10.1212/WNL.0000000000006572.


Two New Species of Pristionchus (Nematoda: Diplogastridae) from Taiwan and the Definition of the pacificus Species-Complex Sensu Stricto.

Yoshida K, Herrmann M, Kanzaki N, Weiler C, Rödelsperger C, Sommer RJ.

J Nematol. 2018;50(3):355-368. doi: 10.21307/jofnem-2018-019.


DAF-19/RFX controls ciliogenesis and influences oxygen-induced social behaviors in Pristionchus pacificus.

Moreno E, Lenuzzi M, Rödelsperger C, Prabh N, Witte H, Roeseler W, Riebesell M, Sommer RJ.

Evol Dev. 2018 Nov;20(6):233-243. doi: 10.1111/ede.12271. Epub 2018 Sep 26.


Developmental Plasticity and Robustness of a Nematode Mouth-Form Polyphenism.

Sieriebriennikov B, Sommer RJ.

Front Genet. 2018 Sep 11;9:382. doi: 10.3389/fgene.2018.00382. eCollection 2018. Review.


Phylotranscriptomics of Pristionchus Nematodes Reveals Parallel Gene Loss in Six Hermaphroditic Lineages.

Rödelsperger C, Röseler W, Prabh N, Yoshida K, Weiler C, Herrmann M, Sommer RJ.

Curr Biol. 2018 Oct 8;28(19):3123-3127.e5. doi: 10.1016/j.cub.2018.07.041. Epub 2018 Sep 20.


Young genes have distinct gene structure, epigenetic profiles, and transcriptional regulation.

Werner MS, Sieriebriennikov B, Prabh N, Loschko T, Lanz C, Sommer RJ.

Genome Res. 2018 Nov;28(11):1675-1687. doi: 10.1101/gr.234872.118. Epub 2018 Sep 19.


Deep taxon sampling reveals the evolutionary dynamics of novel gene families in Pristionchus nematodes.

Prabh N, Roeseler W, Witte H, Eberhardt G, Sommer RJ, Rödelsperger C.

Genome Res. 2018 Nov;28(11):1664-1674. doi: 10.1101/gr.234971.118. Epub 2018 Sep 19.


Two independent sulfation processes regulate mouth-form plasticity in the nematode Pristionchus pacificus.

Namdeo S, Moreno E, Rödelsperger C, Baskaran P, Witte H, Sommer RJ.

Development. 2018 Jul 2;145(13). pii: dev166272. doi: 10.1242/dev.166272.


A Developmental Switch Generating Phenotypic Plasticity Is Part of a Conserved Multi-gene Locus.

Sieriebriennikov B, Prabh N, Dardiry M, Witte H, Röseler W, Kieninger MR, Rödelsperger C, Sommer RJ.

Cell Rep. 2018 Jun 5;23(10):2835-2843.e4. doi: 10.1016/j.celrep.2018.05.008.


Culture-based analysis of Pristionchus-associated microbiota from beetles and figs for studying nematode-bacterial interactions.

Akduman N, Rödelsperger C, Sommer RJ.

PLoS One. 2018 Jun 4;13(6):e0198018. doi: 10.1371/journal.pone.0198018. eCollection 2018.


Linking Genomic and Metabolomic Natural Variation Uncovers Nematode Pheromone Biosynthesis.

Falcke JM, Bose N, Artyukhin AB, Rödelsperger C, Markov GV, Yim JJ, Grimm D, Claassen MH, Panda O, Baccile JA, Zhang YK, Le HH, Jolic D, Schroeder FC, Sommer RJ.

Cell Chem Biol. 2018 Jun 21;25(6):787-796.e12. doi: 10.1016/j.chembiol.2018.04.004. Epub 2018 May 17.


Samplings of Millipedes in Japan and Scarab Beetles in Hong Kong result in five new Species of Pristionchus (Nematoda: Diplogastridae).

Kanzaki N, Herrmann M, Yoshida K, Weiler C, Rödelsperger C, Sommer RJ.

J Nematol. 2018;50(4):587-610. doi: 10.21307/jofnem-2018-044.


Regulation of hyperoxia-induced social behaviour in Pristionchus pacificus nematodes requires a novel cilia-mediated environmental input.

Moreno E, Sieriebriennikov B, Witte H, Rödelsperger C, Lightfoot JW, Sommer RJ.

Sci Rep. 2017 Dec 14;7(1):17550. doi: 10.1038/s41598-017-18019-0.


Single-Molecule Sequencing Reveals the Chromosome-Scale Genomic Architecture of the Nematode Model Organism Pristionchus pacificus.

Rödelsperger C, Meyer JM, Prabh N, Lanz C, Bemm F, Sommer RJ.

Cell Rep. 2017 Oct 17;21(3):834-844. doi: 10.1016/j.celrep.2017.09.077.


Serotonin Drives Predatory Feeding Behavior via Synchronous Feeding Rhythms in the Nematode Pristionchus pacificus.

Okumura M, Wilecki M, Sommer RJ.

G3 (Bethesda). 2017 Nov 6;7(11):3745-3755. doi: 10.1534/g3.117.300263.


Three-dimensional reconstruction of the pharyngeal gland cells in the predatory nematode Pristionchus pacificus.

Riebesell M, Sommer RJ.

J Morphol. 2017 Dec;278(12):1656-1666. doi: 10.1002/jmor.20739. Epub 2017 Sep 12.


Environmental influence on Pristionchus pacificus mouth form through different culture methods.

Werner MS, Sieriebriennikov B, Loschko T, Namdeo S, Lenuzzi M, Dardiry M, Renahan T, Sharma DR, Sommer RJ.

Sci Rep. 2017 Aug 3;7(1):7207. doi: 10.1038/s41598-017-07455-7.


Developmental systems of plasticity and trans-generational epigenetic inheritance in nematodes.

Serobyan V, Sommer RJ.

Curr Opin Genet Dev. 2017 Aug;45:51-57. doi: 10.1016/j.gde.2017.03.001. Epub 2017 Mar 24. Review.


The Role of DAF-21/Hsp90 in Mouth-Form Plasticity in Pristionchus pacificus.

Sieriebriennikov B, Markov GV, Witte H, Sommer RJ.

Mol Biol Evol. 2017 Jul 1;34(7):1644-1653. doi: 10.1093/molbev/msx106.


The genetics of phenotypic plasticity in nematode feeding structures.

Sommer RJ, Dardiry M, Lenuzzi M, Namdeo S, Renahan T, Sieriebriennikov B, Werner MS.

Open Biol. 2017 Mar;7(3). pii: 160332. doi: 10.1098/rsob.160332. Review.


Variation in rates of spontaneous male production within the nematode species Pristionchus pacificus supports an adaptive role for males and outcrossing.

Morgan K, McGaughran A, Rödelsperger C, Sommer RJ.

BMC Evol Biol. 2017 Feb 23;17(1):57. doi: 10.1186/s12862-017-0873-7.


Succession and dynamics of Pristionchus nematodes and their microbiome during decomposition of Oryctes borbonicus on La Réunion Island.

Meyer JM, Baskaran P, Quast C, Susoy V, Rödelsperger C, Glöckner FO, Sommer RJ.

Environ Microbiol. 2017 Apr;19(4):1476-1489. doi: 10.1111/1462-2920.13697. Epub 2017 Mar 2.


Hybrid crosses and the genetic basis of interspecific divergence in lifespan in Pristionchus nematodes.

Weadick CJ, Sommer RJ.

J Evol Biol. 2017 Mar;30(3):650-657. doi: 10.1111/jeb.13022. Epub 2016 Dec 21.


Unexpected sex-specific post-reproductive lifespan in the free-living nematode Pristionchus exspectatus.

Weadick CJ, Sommer RJ.

Evol Dev. 2016 Dec;18(5-6):297-307. doi: 10.1111/ede.12206.


Life History Responses and Gene Expression Profiles of the Nematode Pristionchus pacificus Cultured on Cryptococcus Yeasts.

Sanghvi GV, Baskaran P, Röseler W, Sieriebriennikov B, Rödelsperger C, Sommer RJ.

PLoS One. 2016 Oct 14;11(10):e0164881. doi: 10.1371/journal.pone.0164881. eCollection 2016.


Assaying Predatory Feeding Behaviors in Pristionchus and Other Nematodes.

Lightfoot JW, Wilecki M, Okumura M, Sommer RJ.

J Vis Exp. 2016 Sep 4;(115). doi: 10.3791/54404.


Chromatin remodelling and antisense-mediated up-regulation of the developmental switch gene eud-1 control predatory feeding plasticity.

Serobyan V, Xiao H, Namdeo S, Rödelsperger C, Sieriebriennikov B, Witte H, Röseler W, Sommer RJ.

Nat Commun. 2016 Aug 4;7:12337. doi: 10.1038/ncomms12337.


The Nuclear Hormone Receptor NHR-40 Acts Downstream of the Sulfatase EUD-1 as Part of a Developmental Plasticity Switch in Pristionchus.

Kieninger MR, Ivers NA, Rödelsperger C, Markov GV, Sommer RJ, Ragsdale EJ.

Curr Biol. 2016 Aug 22;26(16):2174-9. doi: 10.1016/j.cub.2016.06.018. Epub 2016 Jul 21.


A locus in Pristionchus pacificus that is responsible for the ability to give rise to fertile offspring at higher temperatures.

Leaver M, Kienle S, Begasse ML, Sommer RJ, Hyman AA.

Biol Open. 2016 Aug 15;5(8):1111-7. doi: 10.1242/bio.018127.


Draft Genome of the Scarab Beetle Oryctes borbonicus on La Réunion Island.

Meyer JM, Markov GV, Baskaran P, Herrmann M, Sommer RJ, Rödelsperger C.

Genome Biol Evol. 2016 Jul 12;8(7):2093-105. doi: 10.1093/gbe/evw133.


Functional Conservation and Divergence of daf-22 Paralogs in Pristionchus pacificus Dauer Development.

Markov GV, Meyer JM, Panda O, Artyukhin AB, Claaßen M, Witte H, Schroeder FC, Sommer RJ.

Mol Biol Evol. 2016 Oct;33(10):2506-14. doi: 10.1093/molbev/msw090. Epub 2016 Apr 28.


Genomic Profiles of Diversification and Genotype-Phenotype Association in Island Nematode Lineages.

McGaughran A, Rödelsperger C, Grimm DG, Meyer JM, Moreno E, Morgan K, Leaver M, Serobyan V, Rakitsch B, Borgwardt KM, Sommer RJ.

Mol Biol Evol. 2016 Sep;33(9):2257-72. doi: 10.1093/molbev/msw093. Epub 2016 May 9.


Nematode orphan genes are adopted by conserved regulatory networks and find a home in ecology.

Mayer MG, Sommer RJ.

Worm. 2015 Aug 24;4(4):e1082029. doi: 10.1080/21624054.2015.1082029. eCollection 2015 Oct-Dec.


Mating System Transitions Drive Life Span Evolution in Pristionchus Nematodes.

Weadick CJ, Sommer RJ.

Am Nat. 2016 Apr;187(4):517-31. doi: 10.1086/685283. Epub 2016 Feb 18.


Oxygen-induced social behaviours in Pristionchus pacificus have a distinct evolutionary history and genetic regulation from Caenorhabditis elegans.

Moreno E, McGaughran A, Rödelsperger C, Zimmer M, Sommer RJ.

Proc Biol Sci. 2016 Feb 24;283(1825):20152263. doi: 10.1098/rspb.2015.2263.


Large-scale diversification without genetic isolation in nematode symbionts of figs.

Susoy V, Herrmann M, Kanzaki N, Kruger M, Nguyen CN, Rödelsperger C, Röseler W, Weiler C, Giblin-Davis RM, Ragsdale EJ, Sommer RJ.

Sci Adv. 2016 Jan 15;2(1):e1501031. doi: 10.1126/sciadv.1501031. eCollection 2016 Jan.


Percutaneous Closure of Intracardiac Defects in Adults: State of the Art.

Pineda AM, Mihos CG, Singla S, Santana O, Rhodes J 3rd, Sommer RJ, Rihal CS, Beohar N.

J Invasive Cardiol. 2015 Dec;27(12):561-72. Review.


Toward a synthesis of developmental biology with evolutionary theory and ecology.

Sommer RJ, Mayer MG.

Annu Rev Cell Dev Biol. 2015;31:453-71. doi: 10.1146/annurev-cellbio-102314-112451. Review.


The Orphan Gene dauerless Regulates Dauer Development and Intraspecific Competition in Nematodes by Copy Number Variation.

Mayer MG, Rödelsperger C, Witte H, Riebesell M, Sommer RJ.

PLoS Genet. 2015 Jun 18;11(6):e1005146. doi: 10.1371/journal.pgen.1005146. eCollection 2015 Jun.


Pristionchus Scratchpads--an online platform for taxonomy, systematics and phylogeny.

Herrmann M, Neuner J, Voetsch M, Wörner J, Kanzaki N, Sommer RJ.

Zootaxa. 2015 Apr 29;3949(4):597-600. doi: 10.11646/zootaxa.3949.4.10. No abstract available.


Nematode signaling molecules derived from multimodular assembly of primary metabolic building blocks.

Yim JJ, Bose N, Meyer JM, Sommer RJ, Schroeder FC.

Org Lett. 2015 Apr 3;17(7):1648-51. doi: 10.1021/acs.orglett.5b00329. Epub 2015 Mar 18.


Predatory feeding behaviour in Pristionchus nematodes is dependent on phenotypic plasticity and induced by serotonin.

Wilecki M, Lightfoot JW, Susoy V, Sommer RJ.

J Exp Biol. 2015 May;218(Pt 9):1306-13. doi: 10.1242/jeb.118620. Epub 2015 Mar 12.

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