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A specific fungal transcription factor controls effector gene expression and orchestrates the establishment of the necrotrophic pathogen lifestyle on wheat.

Jones DAB, John E, Rybak K, Phan HTT, Singh KB, Lin SY, Solomon PS, Oliver RP, Tan KC.

Sci Rep. 2019 Nov 4;9(1):15884. doi: 10.1038/s41598-019-52444-7.


Biosynthesis of a Tricyclo[,7 ]dodecane System by a Berberine Bridge Enzyme-Like Aldolase.

Li H, Hu J, Wei H, Solomon PS, Stubbs KA, Chooi YH.

Chemistry. 2019 Sep 25. doi: 10.1002/chem.201904360. [Epub ahead of print]


Transposon-Mediated Horizontal Transfer of the Host-Specific Virulence Protein ToxA between Three Fungal Wheat Pathogens.

McDonald MC, Taranto AP, Hill E, Schwessinger B, Liu Z, Simpfendorfer S, Milgate A, Solomon PS.

MBio. 2019 Sep 10;10(5). pii: e01515-19. doi: 10.1128/mBio.01515-19.


Bipolenins K-N: New sesquiterpenoids from the fungal plant pathogen Bipolaris sorokiniana.

Phan CS, Li H, Kessler S, Solomon PS, Piggott AM, Chooi YH.

Beilstein J Org Chem. 2019 Aug 26;15:2020-2028. doi: 10.3762/bjoc.15.198. eCollection 2019.


Acquisition and Loss of Secondary Metabolites Shaped the Evolutionary Path of Three Emerging Phytopathogens of Wheat.

Thynne E, Mead OL, Chooi YH, McDonald MC, Solomon PS.

Genome Biol Evol. 2019 Mar 1;11(3):890-905. doi: 10.1093/gbe/evz037.


Rapid Parallel Evolution of Azole Fungicide Resistance in Australian Populations of the Wheat Pathogen Zymoseptoria tritici.

McDonald MC, Renkin M, Spackman M, Orchard B, Croll D, Solomon PS, Milgate A.

Appl Environ Microbiol. 2019 Feb 6;85(4). pii: e01908-18. doi: 10.1128/AEM.01908-18. Print 2019 Feb 15.


Genetic mapping of Stb19, a new resistance gene to Zymoseptoria tritici in wheat.

Yang N, McDonald MC, Solomon PS, Milgate AW.

Theor Appl Genet. 2018 Dec;131(12):2765-2773. doi: 10.1007/s00122-018-3189-0. Epub 2018 Sep 20.


Chemical Ecogenomics-Guided Discovery of Phytotoxic α-Pyrones from the Fungal Wheat Pathogen Parastagonospora nodorum.

Li H, Hu J, Wei H, Solomon PS, Vuong D, Lacey E, Stubbs KA, Piggott AM, Chooi YH.

Org Lett. 2018 Oct 5;20(19):6148-6152. doi: 10.1021/acs.orglett.8b02617. Epub 2018 Sep 18.


Just the surface: advances in the discovery and characterization of necrotrophic wheat effectors.

McDonald MC, Solomon PS.

Curr Opin Microbiol. 2018 Dec;46:14-18. doi: 10.1016/j.mib.2018.01.019. Epub 2018 Feb 22. Review.


Transition from heterothallism to homothallism is hypothesised to have facilitated speciation among emerging Botryosphaeriaceae wheat-pathogens.

Thynne E, McDonald MC, Solomon PS.

Fungal Genet Biol. 2017 Dec;109:36-45. doi: 10.1016/j.fgb.2017.10.005. Epub 2017 Oct 23.


A review of wheat diseases-a field perspective.

Figueroa M, Hammond-Kosack KE, Solomon PS.

Mol Plant Pathol. 2018 Jun;19(6):1523-1536. doi: 10.1111/mpp.12618. Epub 2017 Dec 26. Review.


Emerging Insights into the Functions of Pathogenesis-Related Protein 1.

Breen S, Williams SJ, Outram M, Kobe B, Solomon PS.

Trends Plant Sci. 2017 Oct;22(10):871-879. doi: 10.1016/j.tplants.2017.06.013. Epub 2017 Jul 22. Review.


Heterologous expression of cytotoxic sesquiterpenoids from the medicinal mushroom Lignosus rhinocerotis in yeast.

Yap HY, Muria-Gonzalez MJ, Kong BH, Stubbs KA, Tan CS, Ng ST, Tan NH, Solomon PS, Fung SY, Chooi YH.

Microb Cell Fact. 2017 Jun 12;16(1):103. doi: 10.1186/s12934-017-0713-x.


Have we finally opened the door to understanding Septoria tritici blotch disease in wheat?

Solomon PS.

New Phytol. 2017 Apr;214(2):493-495. doi: 10.1111/nph.14502. No abstract available.


Functional genomics-guided discovery of a light-activated phytotoxin in the wheat pathogen Parastagonospora nodorum via pathway activation.

Chooi YH, Zhang G, Hu J, Muria-Gonzalez MJ, Tran PN, Pettitt A, Maier AG, Barrow RA, Solomon PS.

Environ Microbiol. 2017 May;19(5):1975-1986. doi: 10.1111/1462-2920.13711. Epub 2017 Apr 10.


The discovery of the virulence gene ToxA in the wheat and barley pathogen Bipolaris sorokiniana.

McDonald MC, Ahren D, Simpfendorfer S, Milgate A, Solomon PS.

Mol Plant Pathol. 2018 Feb;19(2):432-439. doi: 10.1111/mpp.12535. Epub 2017 Mar 12.


Editorial: How Can Secretomics Help Unravel the Secrets of Plant-Microbe Interactions?

Vincent D, Plummer KM, Solomon PS, Lebrun MH, Job D, Rafiqi M.

Front Plant Sci. 2016 Nov 30;7:1777. eCollection 2016. No abstract available.


Wheat PR-1 proteins are targeted by necrotrophic pathogen effector proteins.

Breen S, Williams SJ, Winterberg B, Kobe B, Solomon PS.

Plant J. 2016 Oct;88(1):13-25. doi: 10.1111/tpj.13228. Epub 2016 Aug 10.


Fungal phytopathogens encode functional homologues of plant rapid alkalinization factor (RALF) peptides.

Thynne E, Saur IML, Simbaqueba J, Ogilvie HA, Gonzalez-Cendales Y, Mead O, Taranto A, Catanzariti AM, McDonald MC, Schwessinger B, Jones DA, Rathjen JP, Solomon PS.

Mol Plant Pathol. 2017 Aug;18(6):811-824. doi: 10.1111/mpp.12444. Epub 2016 Sep 19.


Differential effector gene expression underpins epistasis in a plant fungal disease.

Phan HT, Rybak K, Furuki E, Breen S, Solomon PS, Oliver RP, Tan KC.

Plant J. 2016 Aug;87(4):343-54. doi: 10.1111/tpj.13203. Epub 2016 Jul 7.


Production of small cysteine-rich effector proteins in Escherichia coli for structural and functional studies.

Zhang X, Nguyen N, Breen S, Outram MA, Dodds PN, Kobe B, Solomon PS, Williams SJ.

Mol Plant Pathol. 2017 Jan;18(1):141-151. doi: 10.1111/mpp.12385. Epub 2016 Apr 12.


Utilizing Gene Tree Variation to Identify Candidate Effector Genes in Zymoseptoria tritici.

McDonald MC, McGinness L, Hane JK, Williams AH, Milgate A, Solomon PS.

G3 (Bethesda). 2016 Apr 7;6(4):779-91. doi: 10.1534/g3.115.025197.


Surveying the potential of secreted antimicrobial peptides to enhance plant disease resistance.

Breen S, Solomon PS, Bedon F, Vincent D.

Front Plant Sci. 2015 Oct 27;6:900. doi: 10.3389/fpls.2015.00900. eCollection 2015. Review.


Correction to "Combining Protein Ratio p-Values as a Pragmatic Approach to the Analysis of Multirun iTRAQ Experiments".

Pascovici D, Song X, Solomon PS, Winterberg B, Mirzaei M, Goodchild A, Stanley WC, Liu J, Molloy MP.

J Proteome Res. 2015 Nov 6;14(11):4944. doi: 10.1021/acs.jproteome.5b00897. Epub 2015 Oct 8. No abstract available.


Functional redundancy of necrotrophic effectors - consequences for exploitation for breeding.

Tan KC, Phan HT, Rybak K, John E, Chooi YH, Solomon PS, Oliver RP.

Front Plant Sci. 2015 Jul 8;6:501. doi: 10.3389/fpls.2015.00501. eCollection 2015.


Next-generation re-sequencing as a tool for rapid bioinformatic screening of presence and absence of genes and accessory chromosomes across isolates of Zymoseptoria tritici.

McDonald MC, Williams AH, Milgate A, Pattemore JA, Solomon PS, Hane JK.

Fungal Genet Biol. 2015 Jun;79:71-5. doi: 10.1016/j.fgb.2015.04.012.


Is Zymoseptoria tritici a hemibiotroph?

Sánchez-Vallet A, McDonald MC, Solomon PS, McDonald BA.

Fungal Genet Biol. 2015 Jun;79:29-32. doi: 10.1016/j.fgb.2015.04.001. Review.


SnPKS19 Encodes the Polyketide Synthase for Alternariol Mycotoxin Biosynthesis in the Wheat Pathogen Parastagonospora nodorum.

Chooi YH, Muria-Gonzalez MJ, Mead OL, Solomon PS.

Appl Environ Microbiol. 2015 Aug 15;81(16):5309-17. doi: 10.1128/AEM.00278-15. Epub 2015 May 29.


Recent advances in the Zymoseptoria tritici-wheat interaction: insights from pathogenomics.

McDonald MC, McDonald BA, Solomon PS.

Front Plant Sci. 2015 Feb 24;6:102. doi: 10.3389/fpls.2015.00102. eCollection 2015.


Phytopathogen emergence in the genomics era.

Thynne E, McDonald MC, Solomon PS.

Trends Plant Sci. 2015 Apr;20(4):246-55. doi: 10.1016/j.tplants.2015.01.009. Epub 2015 Feb 11. Review.


Combining protein ratio p-values as a pragmatic approach to the analysis of multirun iTRAQ experiments.

Pascovici D, Song X, Solomon PS, Winterberg B, Mirzaei M, Goodchild A, Stanley WC, Liu J, Molloy MP.

J Proteome Res. 2015 Feb 6;14(2):738-46. doi: 10.1021/pr501091e. Epub 2015 Jan 13. Erratum in: J Proteome Res. 2015 Nov 6;14(11):4944.


A chemical ecogenomics approach to understand the roles of secondary metabolites in fungal cereal pathogens.

Chooi YH, Solomon PS.

Front Microbiol. 2014 Nov 19;5:640. doi: 10.3389/fmicb.2014.00640. eCollection 2014.


A genome-wide survey of the secondary metabolite biosynthesis genes in the wheat pathogen Parastagonospora nodorum.

Chooi YH, Muria-Gonzalez MJ, Solomon PS.

Mycology. 2014 Jul 3;5(3):192-206. Epub 2014 Jun 24.


An in planta-expressed polyketide synthase produces (R)-mellein in the wheat pathogen Parastagonospora nodorum.

Chooi YH, Krill C, Barrow RA, Chen S, Trengove R, Oliver RP, Solomon PS.

Appl Environ Microbiol. 2015 Jan;81(1):177-86. doi: 10.1128/AEM.02745-14. Epub 2014 Oct 17.


The necrotrophic effector protein SnTox3 re-programs metabolism and elicits a strong defence response in susceptible wheat leaves.

Winterberg B, Du Fall LA, Song X, Pascovici D, Care N, Molloy M, Ohms S, Solomon PS.

BMC Plant Biol. 2014 Aug 15;14:215. doi: 10.1186/s12870-014-0215-5.


The past, present and future of secondary metabolite research in the Dothideomycetes.

Muria-Gonzalez MJ, Chooi YH, Breen S, Solomon PS.

Mol Plant Pathol. 2015 Jan;16(1):92-107. doi: 10.1111/mpp.12162. Epub 2014 Jul 7. Review.


Characterising the role of GABA and its metabolism in the wheat pathogen Stagonospora nodorum.

Mead O, Thynne E, Winterberg B, Solomon PS.

PLoS One. 2013 Nov 12;8(11):e78368. doi: 10.1371/journal.pone.0078368. eCollection 2013.


Coverage and consistency: bioinformatics aspects of the analysis of multirun iTRAQ experiments with wheat leaves.

Pascovici D, Gardiner DM, Song X, Breen E, Solomon PS, Keighley T, Molloy MP.

J Proteome Res. 2013 Nov 1;12(11):4870-81. doi: 10.1021/pr400531y. Epub 2013 Sep 20.


The necrotrophic effector SnToxA induces the synthesis of a novel phytoalexin in wheat.

Du Fall LA, Solomon PS.

New Phytol. 2013 Oct;200(1):185-200. doi: 10.1111/nph.12356. Epub 2013 Jun 19.


Dissecting the role of G-protein signalling in primary metabolism in the wheat pathogen Stagonospora nodorum.

Gummer JP, Trengove RD, Oliver RP, Solomon PS.

Microbiology. 2013 Sep;159(Pt 9):1972-85. doi: 10.1099/mic.0.067009-0. Epub 2013 Jun 6.


Comparative pathogenomics reveals horizontally acquired novel virulence genes in fungi infecting cereal hosts.

Gardiner DM, McDonald MC, Covarelli L, Solomon PS, Rusu AG, Marshall M, Kazan K, Chakraborty S, McDonald BA, Manners JM.

PLoS Pathog. 2012 Sep;8(9):e1002952. doi: 10.1371/journal.ppat.1002952. Epub 2012 Sep 27.


A comparative analysis of the heterotrimeric G-protein Gα, Gβ and Gγ subunits in the wheat pathogen Stagonospora nodorum.

Gummer JP, Trengove RD, Oliver RP, Solomon PS.

BMC Microbiol. 2012 Jul 3;12:131. doi: 10.1186/1471-2180-12-131.


Stagonospora nodorum: from pathology to genomics and host resistance.

Oliver RP, Friesen TL, Faris JD, Solomon PS.

Annu Rev Phytopathol. 2012;50:23-43. doi: 10.1146/annurev-phyto-081211-173019. Epub 2012 May 1. Review.


The cysteine rich necrotrophic effector SnTox1 produced by Stagonospora nodorum triggers susceptibility of wheat lines harboring Snn1.

Liu Z, Zhang Z, Faris JD, Oliver RP, Syme R, McDonald MC, McDonald BA, Solomon PS, Lu S, Shelver WL, Xu S, Friesen TL.

PLoS Pathog. 2012 Jan;8(1):e1002467. doi: 10.1371/journal.ppat.1002467. Epub 2012 Jan 5.


Metabolomics protocols for filamentous fungi.

Gummer JP, Krill C, Du Fall L, Waters OD, Trengove RD, Oliver RP, Solomon PS.

Methods Mol Biol. 2012;835:237-54. doi: 10.1007/978-1-61779-501-5_15.


Proteomic techniques for plant-fungal interactions.

Vincent D, Tan KC, Cassidy L, Solomon PS, Oliver RP.

Methods Mol Biol. 2012;835:75-96. doi: 10.1007/978-1-61779-501-5_5.


Transcriptome analysis of Stagonospora nodorum: gene models, effectors, metabolism and pantothenate dispensability.

Ipcho SV, Hane JK, Antoni EA, Ahren D, Henrissat B, Friesen TL, Solomon PS, Oliver RP.

Mol Plant Pathol. 2012 Aug;13(6):531-45. doi: 10.1111/j.1364-3703.2011.00770.x. Epub 2011 Dec 6.


A functional genomics approach to dissect the mode of action of the Stagonospora nodorum effector protein SnToxA in wheat.

Vincent D, Du Fall LA, Livk A, Mathesius U, Lipscombe RJ, Oliver RP, Friesen TL, Solomon PS.

Mol Plant Pathol. 2012 Jun;13(5):467-82. doi: 10.1111/j.1364-3703.2011.00763.x. Epub 2011 Nov 24.


Assessing the mycotoxigenic threat of necrotrophic pathogens of wheat.

Solomon PS.

Mycotoxin Res. 2011 Nov;27(4):231-7. doi: 10.1007/s12550-011-0108-5. Epub 2011 Aug 12.


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