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Items: 35

1.

FAM92A1 is a BAR domain protein required for mitochondrial ultrastructure and function.

Wang L, Yan Z, Vihinen H, Eriksson O, Wang W, Soliymani R, Lu Y, Xue Y, Jokitalo E, Li J, Zhao H.

J Cell Biol. 2018 Nov 7. pii: jcb.201806191. doi: 10.1083/jcb.201806191. [Epub ahead of print]

PMID:
30404948
2.

Functional analysis of synovial fluid from osteoarthritic knee and carpometacarpal joints unravels different molecular profiles.

Barreto G, Soliymani R, Baumann M, Waris E, Eklund KK, Zenobi-Wong M, Lalowski M.

Rheumatology (Oxford). 2018 Aug 2. doi: 10.1093/rheumatology/key232. [Epub ahead of print]

PMID:
30085131
3.

SETBP1 induces transcription of a network of development genes by acting as an epigenetic hub.

Piazza R, Magistroni V, Redaelli S, Mauri M, Massimino L, Sessa A, Peronaci M, Lalowski M, Soliymani R, Mezzatesta C, Pirola A, Banfi F, Rubio A, Rea D, Stagno F, Usala E, Martino B, Campiotti L, Merli M, Passamonti F, Onida F, Morotti A, Pavesi F, Bregni M, Broccoli V, Baumann M, Gambacorti-Passerini C.

Nat Commun. 2018 Jun 6;9(1):2192. doi: 10.1038/s41467-018-04462-8.

4.

Characterizing the Key Metabolic Pathways of the Neonatal Mouse Heart Using a Quantitative Combinatorial Omics Approach.

Lalowski MM, Björk S, Finckenberg P, Soliymani R, Tarkia M, Calza G, Blokhina D, Tulokas S, Kankainen M, Lakkisto P, Baumann M, Kankuri E, Mervaala E.

Front Physiol. 2018 Apr 11;9:365. doi: 10.3389/fphys.2018.00365. eCollection 2018.

5.

Lactate-Induced Glucose Output Is Unchanged by Metformin at a Therapeutic Concentration - A Mass Spectrometry Imaging Study of the Perfused Rat Liver.

Calza G, Nyberg E, Mäkinen M, Soliymani R, Cascone A, Lindholm D, Barborini E, Baumann M, Lalowski M, Eriksson O.

Front Pharmacol. 2018 Feb 22;9:141. doi: 10.3389/fphar.2018.00141. eCollection 2018.

6.

Estrogen regulates muscle bioenergetic signaling.

Laakkonen EK, Soliymani R, Lalowski M.

Aging (Albany NY). 2018 Feb 4;10(2):160-161. doi: 10.18632/aging.101380. No abstract available.

7.

Extracellular Lipids Accumulate in Human Carotid Arteries as Distinct Three-Dimensional Structures and Have Proinflammatory Properties.

Lehti S, Nguyen SD, Belevich I, Vihinen H, Heikkilä HM, Soliymani R, Käkelä R, Saksi J, Jauhiainen M, Grabowski GA, Kummu O, Hörkkö S, Baumann M, Lindsberg PJ, Jokitalo E, Kovanen PT, Öörni K.

Am J Pathol. 2018 Feb;188(2):525-538. doi: 10.1016/j.ajpath.2017.09.019. Epub 2017 Nov 14.

PMID:
29154769
8.

Estrogenic regulation of skeletal muscle proteome: a study of premenopausal women and postmenopausal MZ cotwins discordant for hormonal therapy.

Laakkonen EK, Soliymani R, Karvinen S, Kaprio J, Kujala UM, Baumann M, Sipilä S, Kovanen V, Lalowski M.

Aging Cell. 2017 Dec;16(6):1276-1287. doi: 10.1111/acel.12661. Epub 2017 Sep 7.

9.

Recent advances in applying mass spectrometry and systems biology to determine brain dynamics.

Scifo E, Calza G, Fuhrmann M, Soliymani R, Baumann M, Lalowski M.

Expert Rev Proteomics. 2017 Jun;14(6):545-559. doi: 10.1080/14789450.2017.1335200. Epub 2017 Jun 1. Review.

PMID:
28539064
10.

Western Diet Deregulates Bile Acid Homeostasis, Cell Proliferation, and Tumorigenesis in Colon.

Dermadi D, Valo S, Ollila S, Soliymani R, Sipari N, Pussila M, Sarantaus L, Linden J, Baumann M, Nyström M.

Cancer Res. 2017 Jun 15;77(12):3352-3363. doi: 10.1158/0008-5472.CAN-16-2860. Epub 2017 Apr 17.

11.

Peroxisome proliferator-activated receptor-γ coactivator-1α mediates neuroprotection against excitotoxic brain injury in transgenic mice: role of mitochondria and X-linked inhibitor of apoptosis protein.

Mäkelä J, Mudò G, Pham DD, Di Liberto V, Eriksson O, Louhivuori L, Bruelle C, Soliymani R, Baumann M, Korhonen L, Lalowski M, Belluardo N, Lindholm D.

Eur J Neurosci. 2016 Mar;43(5):626-39. doi: 10.1111/ejn.13157. Epub 2016 Feb 11.

PMID:
26741810
12.

Proteomic Profiling in the Brain of CLN1 Disease Model Reveals Affected Functional Modules.

Tikka S, Monogioudi E, Gotsopoulos A, Soliymani R, Pezzini F, Scifo E, Uusi-Rauva K, Tyynelä J, Baumann M, Jalanko A, Simonati A, Lalowski M.

Neuromolecular Med. 2016 Mar;18(1):109-33. doi: 10.1007/s12017-015-8382-6. Epub 2015 Dec 26.

PMID:
26707855
13.

Quantitative analysis of PPT1 interactome in human neuroblastoma cells.

Scifo E, Szwajda A, Soliymani R, Pezzini F, Bianchi M, Dapkunas A, Dębski J, Uusi-Rauva K, Dadlez M, Gingras AC, Tyynelä J, Simonati A, Jalanko A, Baumann MH, Lalowski M.

Data Brief. 2015 Jun 12;4:207-16. doi: 10.1016/j.dib.2015.05.016. eCollection 2015 Sep.

14.

Mass-tag enhanced immuno-laser desorption/ionization mass spectrometry for sensitive detection of intact protein antigens.

Lorey M, Adler B, Yan H, Soliymani R, Ekström S, Yli-Kauhaluoma J, Laurell T, Baumann M.

Anal Chem. 2015 May 19;87(10):5255-62. doi: 10.1021/acs.analchem.5b00304. Epub 2015 Apr 30.

PMID:
25867450
15.

Proteomic analysis of the palmitoyl protein thioesterase 1 interactome in SH-SY5Y human neuroblastoma cells.

Scifo E, Szwajda A, Soliymani R, Pezzini F, Bianchi M, Dapkunas A, Dębski J, Uusi-Rauva K, Dadlez M, Gingras AC, Tyynelä J, Simonati A, Jalanko A, Baumann MH, Lalowski M.

J Proteomics. 2015 Jun 18;123:42-53. doi: 10.1016/j.jprot.2015.03.038. Epub 2015 Apr 10.

PMID:
25865307
16.

Matrix metalloproteinase 8 degrades apolipoprotein A-I and reduces its cholesterol efflux capacity.

Salminen A, Åström P, Metso J, Soliymani R, Salo T, Jauhiainen M, Pussinen PJ, Sorsa T.

FASEB J. 2015 Apr;29(4):1435-45. doi: 10.1096/fj.14-262956. Epub 2014 Dec 30.

PMID:
25550459
17.

Antigenic differences between AS03 adjuvanted influenza A (H1N1) pandemic vaccines: implications for pandemrix-associated narcolepsy risk.

Vaarala O, Vuorela A, Partinen M, Baumann M, Freitag TL, Meri S, Saavalainen P, Jauhiainen M, Soliymani R, Kirjavainen T, Olsen P, Saarenpää-Heikkilä O, Rouvinen J, Roivainen M, Nohynek H, Jokinen J, Julkunen I, Kilpi T.

PLoS One. 2014 Dec 15;9(12):e114361. doi: 10.1371/journal.pone.0114361. eCollection 2014.

18.

The Arctic AβPP mutation leads to Alzheimer's disease pathology with highly variable topographic deposition of differentially truncated Aβ.

Kalimo H, Lalowski M, Bogdanovic N, Philipson O, Bird TD, Nochlin D, Schellenberg GD, Brundin R, Olofsson T, Soliymani R, Baumann M, Wirths O, Bayer TA, Nilsson LN, Basun H, Lannfelt L, Ingelsson M.

Acta Neuropathol Commun. 2013 Sep 10;1:60. doi: 10.1186/2051-5960-1-60.

19.

Imaging mass spectrometry: a new tool for kidney disease investigations.

Lalowski M, Magni F, Mainini V, Monogioudi E, Gotsopoulos A, Soliymani R, Chinello C, Baumann M.

Nephrol Dial Transplant. 2013 Jul;28(7):1648-56. doi: 10.1093/ndt/gft008. Epub 2013 Apr 3. Review.

PMID:
23553250
20.

Binding of hepcidin to plasma proteins.

Itkonen O, Stenman UH, Parkkinen J, Soliymani R, Baumann M, Hämäläinen E.

Clin Chem. 2012 Jul;58(7):1158-60. doi: 10.1373/clinchem.2012.186916. Epub 2012 May 14. No abstract available.

21.

Recognition of Porphyromonas gingivalis gingipain epitopes by natural IgM binding to malondialdehyde modified low-density lipoprotein.

Turunen SP, Kummu O, Harila K, Veneskoski M, Soliymani R, Baumann M, Pussinen PJ, Hörkkö S.

PLoS One. 2012;7(4):e34910. doi: 10.1371/journal.pone.0034910. Epub 2012 Apr 5.

22.

The Arctic amyloid-β precursor protein (AβPP) mutation results in distinct plaques and accumulation of N- and C-truncated Aβ.

Philipson O, Lord A, Lalowski M, Soliymani R, Baumann M, Thyberg J, Bogdanovic N, Olofsson T, Tjernberg LO, Ingelsson M, Lannfelt L, Kalimo H, Nilsson LN.

Neurobiol Aging. 2012 May;33(5):1010.e1-13. doi: 10.1016/j.neurobiolaging.2011.10.022. Epub 2011 Nov 26.

PMID:
22118948
23.

Radiation-induced upregulation of gene expression from adenoviral vectors mediated by DNA damage repair and regulation.

Nokisalmi P, Rajecki M, Pesonen S, Escutenaire S, Soliymani R, Tenhunen M, Ahtiainen L, Hemminki A.

Int J Radiat Oncol Biol Phys. 2012 May 1;83(1):376-84. doi: 10.1016/j.ijrobp.2011.06.1973. Epub 2011 Oct 20.

PMID:
22019240
24.

L-Amino acid oxidase of the fungus Hebeloma cylindrosporum displays substrate preference towards glutamate.

Nuutinen JT, Marttinen E, Soliymani R, Hildén K, Timonen S.

Microbiology. 2012 Jan;158(Pt 1):272-83. doi: 10.1099/mic.0.054486-0. Epub 2011 Oct 13.

PMID:
21998160
25.

Analysis of myotilin turnover provides mechanistic insight into the role of myotilinopathy-causing mutations.

von Nandelstadh P, Soliymani R, Baumann M, Carpen O.

Biochem J. 2011 May 15;436(1):113-21. doi: 10.1042/BJ20101672.

PMID:
21361873
26.

Is coproporphyrin III a copper-acquisition compound in Paracoccus denitrificans?

Anttila J, Heinonen P, Nenonen T, Pino A, Iwaï H, Kauppi E, Soliymani R, Baumann M, Saksi J, Suni N, Haltia T.

Biochim Biophys Acta. 2011 Mar;1807(3):311-8. doi: 10.1016/j.bbabio.2010.12.014. Epub 2011 Jan 7.

27.

LACTB is a filament-forming protein localized in mitochondria.

Polianskyte Z, Peitsaro N, Dapkunas A, Liobikas J, Soliymani R, Lalowski M, Speer O, Seitsonen J, Butcher S, Cereghetti GM, Linder MD, Merckel M, Thompson J, Eriksson O.

Proc Natl Acad Sci U S A. 2009 Nov 10;106(45):18960-5. doi: 10.1073/pnas.0906734106. Epub 2009 Oct 26.

28.

Regulation of xylose metabolism in recombinant Saccharomyces cerevisiae.

Salusjärvi L, Kankainen M, Soliymani R, Pitkänen JP, Penttilä M, Ruohonen L.

Microb Cell Fact. 2008 Jun 4;7:18. doi: 10.1186/1475-2859-7-18.

29.

Proteome analysis of cultivated vascular smooth muscle cells from a CADASIL patient.

Ihalainen S, Soliymani R, Iivanainen E, Mykkänen K, Sainio A, Pöyhönen M, Elenius K, Järveläinen H, Viitanen M, Kalimo H, Baumann M.

Mol Med. 2007 May-Jun;13(5-6):305-14.

30.

Identification of a histidine-tyrosine cross-link in the active site of the cbb3-type cytochrome c oxidase from Rhodobacter sphaeroides.

Rauhamäki V, Baumann M, Soliymani R, Puustinen A, Wikström M.

Proc Natl Acad Sci U S A. 2006 Oct 31;103(44):16135-40. Epub 2006 Oct 23.

31.

Glomerular podocytes contain neuron-like functional synaptic vesicles.

Rastaldi MP, Armelloni S, Berra S, Calvaresi N, Corbelli A, Giardino LA, Li M, Wang GQ, Fornasieri A, Villa A, Heikkila E, Soliymani R, Boucherot A, Cohen CD, Kretzler M, Nitsche A, Ripamonti M, Malgaroli A, Pesaresi M, Forloni GL, Schlöndorff D, Holthofer H, D'Amico G.

FASEB J. 2006 May;20(7):976-8. Epub 2006 Apr 3.

PMID:
16585060
32.

A novel approach of targeted ablation of mammary carcinoma cells through luteinizing hormone receptors using Hecate-CGbeta conjugate.

Bodek G, Rahman NA, Zaleska M, Soliymani R, Lankinen H, Hansel W, Huhtaniemi I, Ziecik AJ.

Breast Cancer Res Treat. 2003 May;79(1):1-10.

PMID:
12779076
33.

Hantavirus nucleocapsid protein interacts with the Fas-mediated apoptosis enhancer Daxx.

Li XD, Mäkelä TP, Guo D, Soliymani R, Koistinen V, Vapalahti O, Vaheri A, Lankinen H.

J Gen Virol. 2002 Apr;83(Pt 4):759-66.

PMID:
11907324
34.

Antibacterial activities of temporin A analogs.

Wade D, Silberring J, Soliymani R, Heikkinen S, Kilpeläinen I, Lankinen H, Kuusela P.

FEBS Lett. 2000 Aug 11;479(1-2):6-9.

35.

Phage-displayed peptides mimicking the discontinuous neutralization sites of puumala Hantavirus envelope glycoproteins.

Heiskanen T, Lundkvist A, Soliymani R, Koivunen E, Vaheri A, Lankinen H.

Virology. 1999 Sep 30;262(2):321-32.

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