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Items: 9

1.

RNA velocity of single cells.

La Manno G, Soldatov R, Zeisel A, Braun E, Hochgerner H, Petukhov V, Lidschreiber K, Kastriti ME, Lönnerberg P, Furlan A, Fan J, Borm LE, Liu Z, van Bruggen D, Guo J, He X, Barker R, Sundström E, Castelo-Branco G, Cramer P, Adameyko I, Linnarsson S, Kharchenko PV.

Nature. 2018 Aug;560(7719):494-498. doi: 10.1038/s41586-018-0414-6. Epub 2018 Aug 8.

2.

Differential processing of small RNAs during endoplasmic reticulum stress.

Mesitov MV, Soldatov RA, Zaichenko DM, Malakho SG, Klementyeva TS, Sokolovskaya AA, Kubatiev AA, Mironov AA, Moskovtsev AA.

Sci Rep. 2017 Apr 13;7:46080. doi: 10.1038/srep46080.

3.

Evolution of Local Mutation Rate and Its Determinants.

Terekhanova NV, Seplyarskiy VB, Soldatov RA, Bazykin GA.

Mol Biol Evol. 2017 May 1;34(5):1100-1109. doi: 10.1093/molbev/msx060.

4.

APOBEC-induced mutations in human cancers are strongly enriched on the lagging DNA strand during replication.

Seplyarskiy VB, Soldatov RA, Popadin KY, Antonarakis SE, Bazykin GA, Nikolaev SI.

Genome Res. 2016 Feb;26(2):174-82. doi: 10.1101/gr.197046.115. Epub 2016 Jan 11.

5.

Probing-directed identification of novel structured RNAs.

Vinogradova SV, Sutormin RA, Mironov AA, Soldatov RA.

RNA Biol. 2016;13(2):232-42. doi: 10.1080/15476286.2015.1132140. Erratum in: RNA Biol. 2016 Aug 2;13(8):741.

6.

Polymerase ζ Activity Is Linked to Replication Timing in Humans: Evidence from Mutational Signatures.

Seplyarskiy VB, Bazykin GA, Soldatov RA.

Mol Biol Evol. 2015 Dec;32(12):3158-72. doi: 10.1093/molbev/msv184. Epub 2015 Sep 15.

PMID:
26376651
7.

[Genome-wide identification of functional noncoding RNAs,].

Vinogradova SV, Soldatov RA, Mironov AA.

Mol Biol (Mosk). 2013 Jul-Aug;47(4):689-96. Russian.

8.

RNASurface: fast and accurate detection of locally optimal potentially structured RNA segments.

Soldatov RA, Vinogradova SV, Mironov AA.

Bioinformatics. 2014 Feb 15;30(4):457-63. doi: 10.1093/bioinformatics/btt701. Epub 2013 Nov 28.

PMID:
24292360
9.

[Statistical methods of comparative genomic analysis based on diffusion processes].

Soldatov RA, Mironov AA.

Biofizika. 2013 Mar-Apr;58(2):203-9. Russian.

PMID:
23755544

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