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Items: 17

1.

Genomics of human pulmonary tuberculosis: from genes to pathways.

Stein CM, Sausville L, Wejse C, Sobota RS, Zetola NM, Hill PC, Boom WH, Scott WK, Sirugo G, Williams SM.

Curr Genet Med Rep. 2017 Dec;5(4):149-166. doi: 10.1007/s40142-017-0130-9. Epub 2017 Oct 12.

2.

A chromosome 5q31.1 locus associates with tuberculin skin test reactivity in HIV-positive individuals from tuberculosis hyper-endemic regions in east Africa.

Sobota RS, Stein CM, Kodaman N, Maro I, Wieland-Alter W, Igo RP Jr, Magohe A, Malone LL, Chervenak K, Hall NB, Matee M, Mayanja-Kizza H, Joloba M, Moore JH, Scott WK, Lahey T, Boom WH, von Reyn CF, Williams SM, Sirugo G.

PLoS Genet. 2017 Jun 19;13(6):e1006710. doi: 10.1371/journal.pgen.1006710. eCollection 2017 Jun.

3.

Draft Genome Sequences of 13 Colombian Helicobacter pylori Strains Isolated from Pacific Coast and Andean Residents.

Pazos A, Kodaman N, Piazuelo MB, Romero-Gallo J, Sobota RS, Israel DA, Bravo LE, Morgan DR, Wilson KT, Correa P, Peek RM Jr, Williams SM, Schneider BG.

Genome Announc. 2017 Apr 13;5(15). pii: e00113-17. doi: 10.1128/genomeA.00113-17.

4.

Genetic Effects on the Correlation Structure of CVD Risk Factors: Exome-Wide Data From a Ghanaian Population.

Kodaman N, Sobota RS, Asselbergs FW, Oetjens MT, Moore JH, Brown NJ, Aldrich MC, Williams SM.

Glob Heart. 2017 Jun;12(2):133-140. doi: 10.1016/j.gheart.2017.01.013. Epub 2017 Apr 10. Review.

5.

Erratum to: Epigenetic and genetic variation in GATA5 is associated with gastric disease risk.

Sobota RS, Kodaman N, Mera R, Piazuelo MB, Bravo LE, Pazos A, Zabaleta J, Delgado AG, El-Rifai W, Morgan DR, Wilson KT, Correa P, Williams SM, Schneider BG.

Hum Genet. 2016 Aug;135(8):907-908. doi: 10.1007/s00439-016-1708-0. No abstract available.

PMID:
27417435
6.

Epigenetic and genetic variation in GATA5 is associated with gastric disease risk.

Sobota RS, Kodaman N, Mera R, Piazuelo MB, Bravo LE, Pazos A, Zabaleta J, Delgado AG, El-Rifai W, Morgan DR, Wilson KT, Correa P, Williams SM, Schneider BG.

Hum Genet. 2016 Aug;135(8):895-906. doi: 10.1007/s00439-016-1687-1. Epub 2016 May 25. Erratum in: Hum Genet. 2016 Aug;135(8):907-8.

7.

Expression of complement and toll-like receptor pathway genes is associated with malaria severity in Mali: a pilot case control study.

Sobota RS, Dara A, Manning JE, Niangaly A, Bailey JA, Kone AK, Thera MA, Djimdé AA, Vernet G, Leissner P, Williams SM, Plowe CV, Doumbo OK.

Malar J. 2016 Mar 9;15:150. doi: 10.1186/s12936-016-1189-6.

8.

A Locus at 5q33.3 Confers Resistance to Tuberculosis in Highly Susceptible Individuals.

Sobota RS, Stein CM, Kodaman N, Scheinfeldt LB, Maro I, Wieland-Alter W, Igo RP Jr, Magohe A, Malone LL, Chervenak K, Hall NB, Modongo C, Zetola N, Matee M, Joloba M, Froment A, Nyambo TB, Moore JH, Scott WK, Lahey T, Boom WH, von Reyn CF, Tishkoff SA, Sirugo G, Williams SM.

Am J Hum Genet. 2016 Mar 3;98(3):514-524. doi: 10.1016/j.ajhg.2016.01.015.

9.

Sex-Specific Parental Effects on Offspring Lipid Levels.

Predazzi IM, Sobota RS, Sanna S, Bush WS, Bartlett J, Lilley JS, Linton MF, Schlessinger D, Cucca F, Fazio S, Williams SM.

J Am Heart Assoc. 2015 Jun 30;4(7). pii: e001951. doi: 10.1161/JAHA.115.001951.

10.

Addressing population-specific multiple testing burdens in genetic association studies.

Sobota RS, Shriner D, Kodaman N, Goodloe R, Zheng W, Gao YT, Edwards TL, Amos CI, Williams SM.

Ann Hum Genet. 2015 Mar;79(2):136-47. doi: 10.1111/ahg.12095. Epub 2015 Jan 22.

11.

Successful MDR-TB treatment regimens including amikacin are associated with high rates of hearing loss.

Modongo C, Sobota RS, Kesenogile B, Ncube R, Sirugo G, Williams SM, Zetola NM.

BMC Infect Dis. 2014 Oct 9;14:542. doi: 10.1186/1471-2334-14-542.

12.

Disrupted human-pathogen co-evolution: a model for disease.

Kodaman N, Sobota RS, Mera R, Schneider BG, Williams SM.

Front Genet. 2014 Aug 25;5:290. doi: 10.3389/fgene.2014.00290. eCollection 2014.

13.

Co-infection with HPV types from the same species provides natural cross-protection from progression to cervical cancer.

Sobota RS, Ramogola-Masire D, Williams SM, Zetola NM.

Infect Agent Cancer. 2014 Aug 12;9:26. doi: 10.1186/1750-9378-9-26. eCollection 2014.

14.

Diverse convergent evidence in the genetic analysis of complex disease: coordinating omic, informatic, and experimental evidence to better identify and validate risk factors.

Ciesielski TH, Pendergrass SA, White MJ, Kodaman N, Sobota RS, Huang M, Bartlett J, Li J, Pan Q, Gui J, Selleck SB, Amos CI, Ritchie MD, Moore JH, Williams SM.

BioData Min. 2014 Jun 30;7:10. doi: 10.1186/1756-0381-7-10. eCollection 2014.

15.

Human and Helicobacter pylori coevolution shapes the risk of gastric disease.

Kodaman N, Pazos A, Schneider BG, Piazuelo MB, Mera R, Sobota RS, Sicinschi LA, Shaffer CL, Romero-Gallo J, de Sablet T, Harder RH, Bravo LE, Peek RM Jr, Wilson KT, Cover TL, Williams SM, Correa P.

Proc Natl Acad Sci U S A. 2014 Jan 28;111(4):1455-60. doi: 10.1073/pnas.1318093111. Epub 2014 Jan 13.

16.

Salt sensitivity of blood pressure is associated with polymorphisms in the sodium-bicarbonate cotransporter.

Carey RM, Schoeffel CD, Gildea JJ, Jones JE, McGrath HE, Gordon LN, Park MJ, Sobota RS, Underwood PC, Williams J, Sun B, Raby B, Lasky-Su J, Hopkins PN, Adler GK, Williams SM, Jose PA, Felder RA.

Hypertension. 2012 Nov;60(5):1359-66. doi: 10.1161/HYPERTENSIONAHA.112.196071. Epub 2012 Sep 17.

17.

Abundant, diverse, and consequential P elements segregate in promoters of small heat-shock genes in Drosophila populations.

Chen B, Walser JC, Rodgers TH, Sobota RS, Burke MK, Rose MR, Feder ME.

J Evol Biol. 2007 Sep;20(5):2056-66.

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