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Genomic Medicine-Progress, Pitfalls, and Promise.

Shendure J, Findlay GM, Snyder MW.

Cell. 2019 Mar 21;177(1):45-57. doi: 10.1016/j.cell.2019.02.003. Review.


Gene-Environment Interaction in the Era of Precision Medicine.

Li J, Li X, Zhang S, Snyder M.

Cell. 2019 Mar 21;177(1):38-44. doi: 10.1016/j.cell.2019.03.004.


Generation and persistence of human tissue-resident memory T cells in lung transplantation.

Snyder ME, Finlayson MO, Connors TJ, Dogra P, Senda T, Bush E, Carpenter D, Marboe C, Benvenuto L, Shah L, Robbins H, Hook JL, Sykes M, D'Ovidio F, Bacchetta M, Sonett JR, Lederer DJ, Arcasoy S, Sims PA, Farber DL.

Sci Immunol. 2019 Mar 8;4(33). pii: eaav5581. doi: 10.1126/sciimmunol.aav5581.


Much ado about nothing: A qualitative study of the experiences of an average-risk population receiving results of exome sequencing.

Rego S, Dagan-Rosenfeld O, Bivona SA, Snyder MP, Ormond KE.

J Genet Couns. 2019 Mar 5. doi: 10.1002/jgc4.1096. [Epub ahead of print]


De Novo Variants Disrupting the HX Repeat Motif of ATN1 Cause a Recognizable Non-Progressive Neurocognitive Syndrome.

Palmer EE, Hong S, Al Zahrani F, Hashem MO, Aleisa FA, Ahmed HMJ, Kandula T, Macintosh R, Minoche AE, Puttick C, Gayevskiy V, Drew AP, Cowley MJ, Dinger M, Rosenfeld JA, Xiao R, Cho MT, Yakubu SF, Henderson LB, Guillen Sacoto MJ, Begtrup A, Hamad M, Shinawi M, Andrews MV, Jones MC, Lindstrom K, Bristol RE, Kayani S, Snyder M, Villanueva MM, Schteinschnaider A, Faivre L, Thauvin C, Vitobello A, Roscioli T, Kirk EP, Bye A, Merzaban J, Jaremko Ł, Jaremko M, Sachdev RK, Alkuraya FS, Arold ST.

Am J Hum Genet. 2019 Mar 7;104(3):542-552. doi: 10.1016/j.ajhg.2019.01.013. Epub 2019 Feb 28.


Lifelong physical activity is associated with promoter hypomethylation of genes involved in metabolism, myogenesis, contractile properties and oxidative stress resistance in aged human skeletal muscle.

Sailani MR, Halling JF, Møller HD, Lee H, Plomgaard P, Pilegaard H, Snyder MP, Regenberg B.

Sci Rep. 2019 Mar 1;9(1):3272. doi: 10.1038/s41598-018-37895-8.


Long-Read Sequencing - A Powerful Tool in Viral Transcriptome Research.

Boldogkői Z, Moldován N, Balázs Z, Snyder M, Tombácz D.

Trends Microbiol. 2019 Feb 26. pii: S0966-842X(19)30036-8. doi: 10.1016/j.tim.2019.01.010. [Epub ahead of print] Review.


Stroke Simulation Activity: A Standardized Patient Case for Interprofessional Student Learning.

Karpa K, Pinto C, Possanza A, Dos Santos J, Snyder M, Salvadia A, Panchik D, Myers R, Fink M, Dunlap A.

MedEdPORTAL. 2018 Mar 29;14:10698. doi: 10.15766/mep_2374-8265.10698.


General Surgery Resident Educational Session Improves Accuracy of Wound Classification.

Zens T, Beems M, Haines K, Rauh R, Bhattarai A, Heise C, Snyder M, Agarwal S.

Am Surg. 2019 Jan 1;85(1):e24-e26. No abstract available.


Faculty perceptions of a tobacco cessation train-the-trainer workshop and experiences with implementation: A qualitative follow-up study.

Elkhadragy N, Corelli RL, Russ AL, Snyder ME, Clabaugh M, Hudmon KS.

Res Social Adm Pharm. 2019 Jan 9. pii: S1551-7411(18)30711-3. doi: 10.1016/j.sapharm.2019.01.005. [Epub ahead of print]


Whole-exome sequencing data of suicide victims who had suffered from major depressive disorder.

Tombácz D, Maróti Z, Kalmár T, Palkovits M, Snyder M, Boldogkői Z.

Sci Data. 2019 Feb 5;6:190010. doi: 10.1038/sdata.2019.10.


Asymptomatic subcutaneous nodules on the feet of an infant.

Snyder M, Gillihan R, Schoch J.

Arch Dis Child. 2019 Jan 31. pii: archdischild-2018-316699. doi: 10.1136/archdischild-2018-316699. [Epub ahead of print] No abstract available.


February consultation #2.

Snyder ME.

J Cataract Refract Surg. 2019 Feb;45(2):244-246. doi: 10.1016/j.jcrs.2018.11.020. No abstract available.


Phacoemulsification of posterior polar cataracts.

Foster GJL, Ayers B, Fram N, Hoffman RS, Khandewal S, Ogawa G, MacDonald SM, Snyder ME, Vasavada A.

J Cataract Refract Surg. 2019 Feb;45(2):228-235. doi: 10.1016/j.jcrs.2018.09.029. Review.


An Interdisciplinary Approach to Surgical Skills Training Decreases Programmatic Costs.

D'Angelo J, Snyder M, Bleedorn J, Hardie R, Foley E, Greenberg JA.

J Surg Res. 2019 Mar;235:600-606. doi: 10.1016/j.jss.2018.10.026. Epub 2018 Dec 6.


Healthy spaces: Exploring urban Indigenous youth perspectives of social support and health using photovoice.

Goodman A, Snyder M, Wilson K, Whitford J.

Health Place. 2019 Mar;56:34-42. doi: 10.1016/j.healthplace.2019.01.004. Epub 2019 Jan 25.


Missing Ingredients in Shared Decision-Making?

Pavlo AJ, O'Connell M, Olsen S, Snyder MK, Davidson L.

Psychiatr Q. 2019 Jan 25. doi: 10.1007/s11126-019-9624-9. [Epub ahead of print]


Spectrum of neurodevelopmental disease associated with the GNAO1 guanosine triphosphate-binding region.

Kelly M, Park M, Mihalek I, Rochtus A, Gramm M, Pérez-Palma E, Axeen ET, Hung CY, Olson H, Swanson L, Anselm I, Briere LC, High FA, Sweetser DA; Undiagnosed Diseases Network, Kayani S, Snyder M, Calvert S, Scheffer IE, Yang E, Waugh JL, Lal D, Bodamer O, Poduri A.

Epilepsia. 2019 Mar;60(3):406-418. doi: 10.1111/epi.14653. Epub 2019 Jan 25.


Treatment of endometriosis-related chronic pelvic pain with Ulipristal Acetate and associated endometrial changes.

Bressler LH, Bernardi LA, Snyder MA, Wei JJ, Bulun S.

HSOA J Reprod Med Gynaecol Obstet. 2017 Dec;2. pii: 008. doi: 10.24966/RMGO-2574/100008. Epub 2017 Dec 30.


Review of international efforts to strengthen the global outbreak response system since the 2014-16 West Africa Ebola Epidemic.

Ravi SJ, Snyder MR, Rivers C.

Health Policy Plan. 2019 Jan 8. doi: 10.1093/heapol/czy102. [Epub ahead of print]


Parent Perceptions of Initial Feeding Experiences of Children Born With Cleft Palate in a Rural Locale.

Snyder M, Ruscello DM.

Cleft Palate Craniofac J. 2018 Dec 26:1055665618820754. doi: 10.1177/1055665618820754. [Epub ahead of print]


Smooth Muscle Contact Drives Endothelial Regeneration by BMPR2-Notch1-Mediated Metabolic and Epigenetic Changes.

Miyagawa K, Shi M, Chen PI, Hennigs JK, Zhao Z, Wang M, Li CG, Saito T, Taylor S, Sa S, Cao A, Wang L, Snyder MP, Rabinovitch M.

Circ Res. 2019 Jan 18;124(2):211-224. doi: 10.1161/CIRCRESAHA.118.313374.


Multiomics modeling of the immunome, transcriptome, microbiome, proteome and metabolome adaptations during human pregnancy.

Ghaemi MS, DiGiulio DB, Contrepois K, Callahan B, Ngo TTM, Lee-McMullen B, Lehallier B, Robaczewska A, Mcilwain D, Rosenberg-Hasson Y, Wong RJ, Quaintance C, Culos A, Stanley N, Tanada A, Tsai A, Gaudilliere D, Ganio E, Han X, Ando K, McNeil L, Tingle M, Wise P, Maric I, Sirota M, Wyss-Coray T, Winn VD, Druzin ML, Gibbs R, Darmstadt GL, Lewis DB, Partovi Nia V, Agard B, Tibshirani R, Nolan G, Snyder MP, Relman DA, Quake SR, Shaw GM, Stevenson DK, Angst MS, Gaudilliere B, Aghaeepour N.

Bioinformatics. 2019 Jan 1;35(1):95-103. doi: 10.1093/bioinformatics/bty537.


Understanding health disparities.

Stevenson DK, Wong RJ, Aghaeepour N, Angst MS, Darmstadt GL, DiGiulio DB, Druzin ML, Gaudilliere B, Gibbs RS, B Gould J, Katz M, Li J, Moufarrej MN, Quaintance CC, Quake SR, Relman DA, Shaw GM, Snyder MP, Wang X, Wise PH.

J Perinatol. 2019 Mar;39(3):354-358. doi: 10.1038/s41372-018-0298-1. Epub 2018 Dec 18.


Metformin Affects Heme Function as a Possible Mechanism of Action.

Li X, Wang X, Snyder MP.

G3 (Bethesda). 2019 Feb 7;9(2):513-522. doi: 10.1534/g3.118.200803.


Microanatomical dissection of human intestinal T-cell immunity reveals site-specific changes in gut-associated lymphoid tissues over life.

Senda T, Dogra P, Granot T, Furuhashi K, Snyder ME, Carpenter DJ, Szabo PA, Thapa P, Miron M, Farber DL.

Mucosal Immunol. 2019 Mar;12(2):378-389. doi: 10.1038/s41385-018-0110-8. Epub 2018 Dec 6.


fMRIPrep: a robust preprocessing pipeline for functional MRI.

Esteban O, Markiewicz CJ, Blair RW, Moodie CA, Isik AI, Erramuzpe A, Kent JD, Goncalves M, DuPre E, Snyder M, Oya H, Ghosh SS, Wright J, Durnez J, Poldrack RA, Gorgolewski KJ.

Nat Methods. 2019 Jan;16(1):111-116. doi: 10.1038/s41592-018-0235-4. Epub 2018 Dec 10.


Cross-Platform Comparison of Untargeted and Targeted Lipidomics Approaches on Aging Mouse Plasma.

Contrepois K, Mahmoudi S, Ubhi BK, Papsdorf K, Hornburg D, Brunet A, Snyder M.

Sci Rep. 2018 Dec 10;8(1):17747. doi: 10.1038/s41598-018-35807-4.


1818, 1918, 2018: Two Centuries of Pandemics.

Snyder MR, Ravi SJ.

Health Secur. 2018 Dec 4. doi: 10.1089/hs.2018.0083. [Epub ahead of print]


High-frequency actionable pathogenic exome variants in an average-risk cohort.

Rego S, Dagan-Rosenfeld O, Zhou W, Sailani MR, Limcaoco P, Colbert E, Avina M, Wheeler J, Craig C, Salins D, Röst HL, Dunn J, McLaughlin T, Steinmetz LM, Bernstein JA, Snyder MP.

Cold Spring Harb Mol Case Stud. 2018 Dec 17;4(6). pii: a003178. doi: 10.1101/mcs.a003178. Print 2018 Dec.


American Society of Hematology 2018 guidelines for management of venous thromboembolism: diagnosis of venous thromboembolism.

Lim W, Le Gal G, Bates SM, Righini M, Haramati LB, Lang E, Kline JA, Chasteen S, Snyder M, Patel P, Bhatt M, Patel P, Braun C, Begum H, Wiercioch W, Schünemann HJ, Mustafa RA.

Blood Adv. 2018 Nov 27;2(22):3226-3256. doi: 10.1182/bloodadvances.2018024828. Review.


Transcriptomic study of Herpes simplex virus type-1 using full-length sequencing techniques.

Boldogkői Z, Szűcs A, Balázs Z, Sharon D, Snyder M, Tombácz D.

Sci Data. 2018 Nov 27;5:180266. doi: 10.1038/sdata.2018.266.


New insights into structural features and optimal detection of circulating tumor DNA determined by single-strand DNA analysis.

Sanchez C, Snyder MW, Tanos R, Shendure J, Thierry AR.

NPJ Genom Med. 2018 Nov 23;3:31. doi: 10.1038/s41525-018-0069-0. eCollection 2018.


Macrophage de novo NAD+ synthesis specifies immune function in aging and inflammation.

Minhas PS, Liu L, Moon PK, Joshi AU, Dove C, Mhatre S, Contrepois K, Wang Q, Lee BA, Coronado M, Bernstein D, Snyder MP, Migaud M, Majeti R, Mochly-Rosen D, Rabinowitz JD, Andreasson KI.

Nat Immunol. 2019 Jan;20(1):50-63. doi: 10.1038/s41590-018-0255-3. Epub 2018 Nov 26.


Dynamic transcriptome profiling dataset of vaccinia virus obtained from long-read sequencing techniques.

Tombácz D, Prazsák I, Szucs A, Dénes B, Snyder M, Boldogkoi Z.

Gigascience. 2018 Dec 1;7(12). doi: 10.1093/gigascience/giy139.


Functional regulatory mechanism of smooth muscle cell-restricted LMOD1 coronary artery disease locus.

Nanda V, Wang T, Pjanic M, Liu B, Nguyen T, Matic LP, Hedin U, Koplev S, Ma L, Franzén O, Ruusalepp A, Schadt EE, Björkegren JLM, Montgomery SB, Snyder MP, Quertermous T, Leeper NJ, Miller CL.

PLoS Genet. 2018 Nov 16;14(11):e1007755. doi: 10.1371/journal.pgen.1007755. eCollection 2018 Nov.


The Role of Human Leukocyte Antigen in Celiac Disease Diagnostics.

Lázár-Molnár E, Snyder M.

Clin Lab Med. 2018 Dec;38(4):655-668. doi: 10.1016/j.cll.2018.07.007. Epub 2018 Oct 5. Review.


Longitudinal personal DNA methylome dynamics in a human with a chronic condition.

Chen R, Xia L, Tu K, Duan M, Kukurba K, Li-Pook-Than J, Xie D, Snyder M.

Nat Med. 2018 Dec;24(12):1930-1939. doi: 10.1038/s41591-018-0237-x. Epub 2018 Nov 5.


Identification of phagocytosis regulators using magnetic genome-wide CRISPR screens.

Haney MS, Bohlen CJ, Morgens DW, Ousey JA, Barkal AA, Tsui CK, Ego BK, Levin R, Kamber RA, Collins H, Tucker A, Li A, Vorselen D, Labitigan L, Crane E, Boyle E, Jiang L, Chan J, Rincón E, Greenleaf WJ, Li B, Snyder MP, Weissman IL, Theriot JA, Collins SR, Barres BA, Bassik MC.

Nat Genet. 2018 Dec;50(12):1716-1727. doi: 10.1038/s41588-018-0254-1. Epub 2018 Nov 5.


Evaluation of whole exome sequencing as an alternative to BeadChip and whole genome sequencing in human population genetic analysis.

Maróti Z, Boldogkői Z, Tombácz D, Snyder M, Kalmár T.

BMC Genomics. 2018 Oct 29;19(1):778. doi: 10.1186/s12864-018-5168-x.



Snyder ME, Thornton IL, McMains B.

J Cataract Refract Surg. 2018 Nov;44(11):1406-1407. doi: 10.1016/j.jcrs.2018.08.003. No abstract available.


Health Care Experiences of Lesbian Women: A Metasynthesis.

Snyder M.

ANS Adv Nurs Sci. 2019 Jan/Mar;42(1):E1-E21. doi: 10.1097/ANS.0000000000000226.


Plasmodium falciparum Cyclic GMP-Dependent Protein Kinase Interacts with a Subunit of the Parasite Proteasome.

Govindasamy K, Khan R, Snyder M, Lou HJ, Du P, Kudyba HM, Muralidharan V, Turk BE, Bhanot P.

Infect Immun. 2018 Dec 19;87(1). pii: e00523-18. doi: 10.1128/IAI.00523-18. Print 2019 Jan.


Bedside clinical neurologic assessment utilisation in paediatric cardiac intensive care units.

Kirschen MP, Blinder J, Dewitt A, Snyder M, Ichord R, Berg RA, Nadkarni V, Topjian A.

Cardiol Young. 2018 Dec;28(12):1457-1462. doi: 10.1017/S1047951118001634. Epub 2018 Oct 16.


Dual Platform Long-Read RNA-Sequencing Dataset of the Human Cytomegalovirus Lytic Transcriptome.

Balázs Z, Tombácz D, Szűcs A, Snyder M, Boldogkői Z.

Front Genet. 2018 Sep 27;9:432. doi: 10.3389/fgene.2018.00432. eCollection 2018. No abstract available.


A rapidly growing violaceous tumor in a neonate.

Snyder M, Wall WB, Davis LS.

JAAD Case Rep. 2018 Oct 3;4(9):893-895. doi: 10.1016/j.jdcr.2018.08.005. eCollection 2018 Oct. No abstract available.


Evaluating the frequency of operational research conducted during the 2014-2016 West Africa Ebola epidemic.

Hurtado C, Meyer D, Snyder M, Nuzzo JB.

Int J Infect Dis. 2018 Dec;77:29-33. doi: 10.1016/j.ijid.2018.09.027. Epub 2018 Oct 5. Review.


Precision Medicine: Role of Proteomics in Changing Clinical Management and Care.

Van Eyk JE, Snyder MP.

J Proteome Res. 2018 Oct 22. doi: 10.1021/acs.jproteome.8b00504. [Epub ahead of print]


Responding to natural disasters: Examining identity and prosociality in the context of a major earthquake.

Maki A, Dwyer PC, Blazek S, Snyder M, González R, Lay S.

Br J Soc Psychol. 2019 Jan;58(1):66-87. doi: 10.1111/bjso.12281. Epub 2018 Oct 8.


Prediction of Susceptibility to First-Line Tuberculosis Drugs by DNA Sequencing.

CRyPTIC Consortium and the 100,000 Genomes Project, Allix-Béguec C, Arandjelovic I, Bi L, Beckert P, Bonnet M, Bradley P, Cabibbe AM, Cancino-Muñoz I, Caulfield MJ, Chaiprasert A, Cirillo DM, Clifton DA, Comas I, Crook DW, De Filippo MR, de Neeling H, Diel R, Drobniewski FA, Faksri K, Farhat MR, Fleming J, Fowler P, Fowler TA, Gao Q, Gardy J, Gascoyne-Binzi D, Gibertoni-Cruz AL, Gil-Brusola A, Golubchik T, Gonzalo X, Grandjean L, He G, Guthrie JL, Hoosdally S, Hunt M, Iqbal Z, Ismail N, Johnston J, Khanzada FM, Khor CC, Kohl TA, Kong C, Lipworth S, Liu Q, Maphalala G, Martinez E, Mathys V, Merker M, Miotto P, Mistry N, Moore DAJ, Murray M, Niemann S, Omar SV, Ong RT, Peto TEA, Posey JE, Prammananan T, Pym A, Rodrigues C, Rodrigues M, Rodwell T, Rossolini GM, Sánchez Padilla E, Schito M, Shen X, Shendure J, Sintchenko V, Sloutsky A, Smith EG, Snyder M, Soetaert K, Starks AM, Supply P, Suriyapol P, Tahseen S, Tang P, Teo YY, Thuong TNT, Thwaites G, Tortoli E, van Soolingen D, Walker AS, Walker TM, Wilcox M, Wilson DJ, Wyllie D, Yang Y, Zhang H, Zhao Y, Zhu B.

N Engl J Med. 2018 Oct 11;379(15):1403-1415. doi: 10.1056/NEJMoa1800474. Epub 2018 Sep 26.

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