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Items: 20

1.

The hpRNA/RNAi Pathway Is Essential to Resolve Intragenomic Conflict in the Drosophila Male Germline.

Lin CJ, Hu F, Dubruille R, Vedanayagam J, Wen J, Smibert P, Loppin B, Lai EC.

Dev Cell. 2018 Aug 6;46(3):316-326.e5. doi: 10.1016/j.devcel.2018.07.004.

PMID:
30086302
2.

YES1 amplification is a mechanism of acquired resistance to EGFR inhibitors identified by transposon mutagenesis and clinical genomics.

Fan PD, Narzisi G, Jayaprakash AD, Venturini E, Robine N, Smibert P, Germer S, Yu HA, Jordan EJ, Paik PK, Janjigian YY, Chaft JE, Wang L, Jungbluth AA, Middha S, Spraggon L, Qiao H, Lovly CM, Kris MG, Riely GJ, Politi K, Varmus H, Ladanyi M.

Proc Natl Acad Sci U S A. 2018 Jun 26;115(26):E6030-E6038. doi: 10.1073/pnas.1717782115. Epub 2018 Jun 6.

3.

Integrating single-cell transcriptomic data across different conditions, technologies, and species.

Butler A, Hoffman P, Smibert P, Papalexi E, Satija R.

Nat Biotechnol. 2018 Jun;36(5):411-420. doi: 10.1038/nbt.4096. Epub 2018 Apr 2.

PMID:
29608179
4.

Simultaneous epitope and transcriptome measurement in single cells.

Stoeckius M, Hafemeister C, Stephenson W, Houck-Loomis B, Chattopadhyay PK, Swerdlow H, Satija R, Smibert P.

Nat Methods. 2017 Sep;14(9):865-868. doi: 10.1038/nmeth.4380. Epub 2017 Jul 31.

5.

Correction: Neural specificity of the RNA-binding protein Elav is achieved by post-transcriptional repression in non-neural tissues.

Sanfilippo P, Smibert P, Duan H, Lai EC.

Development. 2017 Apr 15;144(8):1578. doi: 10.1242/dev.151753. No abstract available.

6.

Neural specificity of the RNA-binding protein Elav is achieved by post-transcriptional repression in non-neural tissues.

Sanfilippo P, Smibert P, Duan H, Lai EC.

Development. 2016 Dec 1;143(23):4474-4485. Epub 2016 Oct 17. Erratum in: Development. 2017 Apr 15;144(8):1578.

7.

An extensive allelic series of Drosophila kae1 mutants reveals diverse and tissue-specific requirements for t6A biogenesis.

Lin CJ, Smibert P, Zhao X, Hu JF, Ramroop J, Kellner SM, Benton MA, Govind S, Dedon PC, Sternglanz R, Lai EC.

RNA. 2015 Dec;21(12):2103-18. doi: 10.1261/rna.053934.115. Epub 2015 Oct 29.

8.

Intertwined pathways for Argonaute-mediated microRNA biogenesis in Drosophila.

Yang JS, Smibert P, Westholm JO, Jee D, Maurin T, Lai EC.

Nucleic Acids Res. 2014 Feb;42(3):1987-2002. doi: 10.1093/nar/gkt1038. Epub 2013 Nov 12.

9.

The miR-310/13 cluster antagonizes β-catenin function in the regulation of germ and somatic cell differentiation in the Drosophila testis.

Pancratov R, Peng F, Smibert P, Yang S Jr, Olson ER, Guha-Gilford C, Kapoor AJ, Liang FX, Lai EC, Flaherty MS, DasgGupta R.

Development. 2013 Jul;140(14):2904-16. doi: 10.1242/dev.092817.

10.

Homeostatic control of Argonaute stability by microRNA availability.

Smibert P, Yang JS, Azzam G, Liu JL, Lai EC.

Nat Struct Mol Biol. 2013 Jul;20(7):789-95. doi: 10.1038/nsmb.2606. Epub 2013 May 26.

11.

Global patterns of tissue-specific alternative polyadenylation in Drosophila.

Smibert P, Miura P, Westholm JO, Shenker S, May G, Duff MO, Zhang D, Eads BD, Carlson J, Brown JB, Eisman RC, Andrews J, Kaufman T, Cherbas P, Celniker SE, Graveley BR, Lai EC.

Cell Rep. 2012 Mar 29;1(3):277-89. Erratum in: Cell Rep. 2013 Mar 28;3(3):969.

12.

Drosophila Argonaute 1 and its miRNA biogenesis partners are required for oocyte formation and germline cell division.

Azzam G, Smibert P, Lai EC, Liu JL.

Dev Biol. 2012 May 15;365(2):384-94. doi: 10.1016/j.ydbio.2012.03.005. Epub 2012 Mar 14.

13.

Exploiting Drosophila genetics to understand microRNA function and regulation.

Dai Q, Smibert P, Lai EC.

Curr Top Dev Biol. 2012;99:201-235. doi: 10.1016/B978-0-12-387038-4.00008-2. Review.

14.

A Drosophila genetic screen yields allelic series of core microRNA biogenesis factors and reveals post-developmental roles for microRNAs.

Smibert P, Bejarano F, Wang D, Garaulet DL, Yang JS, Martin R, Bortolamiol-Becet D, Robine N, Hiesinger PR, Lai EC.

RNA. 2011 Nov;17(11):1997-2010. doi: 10.1261/rna.2983511. Epub 2011 Sep 23.

15.

miR-33a/b contribute to the regulation of fatty acid metabolism and insulin signaling.

Dávalos A, Goedeke L, Smibert P, Ramírez CM, Warrier NP, Andreo U, Cirera-Salinas D, Rayner K, Suresh U, Pastor-Pareja JC, Esplugues E, Fisher EA, Penalva LO, Moore KJ, Suárez Y, Lai EC, Fernández-Hernando C.

Proc Natl Acad Sci U S A. 2011 May 31;108(22):9232-7. doi: 10.1073/pnas.1102281108. Epub 2011 May 16.

16.

A view from Drosophila: multiple biological functions for individual microRNAs.

Smibert P, Lai EC.

Semin Cell Dev Biol. 2010 Sep;21(7):745-53. doi: 10.1016/j.semcdb.2010.03.001. Epub 2010 Mar 6. Review.

17.

miR-9a prevents apoptosis during wing development by repressing Drosophila LIM-only.

Bejarano F, Smibert P, Lai EC.

Dev Biol. 2010 Feb 1;338(1):63-73. doi: 10.1016/j.ydbio.2009.11.025. Epub 2009 Nov 26.

18.

A Drosophila pasha mutant distinguishes the canonical microRNA and mirtron pathways.

Martin R, Smibert P, Yalcin A, Tyler DM, Schäfer U, Tuschl T, Lai EC.

Mol Cell Biol. 2009 Feb;29(3):861-70. doi: 10.1128/MCB.01524-08. Epub 2008 Dec 1.

19.

Lessons from microRNA mutants in worms, flies and mice.

Smibert P, Lai EC.

Cell Cycle. 2008 Aug 15;7(16):2500-8. Epub 2008 Aug 17. Review.

20.

Know thy fly.

O'Keefe LV, Smibert P, Colella A, Chataway TK, Saint R, Richards RI.

Trends Genet. 2007 May;23(5):238-42. Epub 2007 Mar 28.

PMID:
17395332

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