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A Single Biosynthetic Gene Cluster Is Responsible for the Production of Bagremycin Antibiotics and Ferroverdin Iron Chelators.

Martinet L, Naômé A, Deflandre B, Maciejewska M, Tellatin D, Tenconi E, Smargiasso N, de Pauw E, van Wezel GP, Rigali S.

MBio. 2019 Aug 13;10(4). pii: e01230-19. doi: 10.1128/mBio.01230-19.


Exploring the N-Glycosylation Profile of Glycoprotein B from Human Cytomegalovirus Expressed in CHO and Nicotiana tabacum BY-2 Cells.

Smargiasso N, Nader J, Rioux S, Mazzucchelli G, Boutry M, De Pauw E, Chaumont F, Navarre C.

Int J Mol Sci. 2019 Jul 31;20(15). pii: E3741. doi: 10.3390/ijms20153741.


Proteomics highlights common and distinct pathophysiological processes associated to ileal and colonic ulcers in Crohn's disease.

Pierre N, Salée C, Massot C, Blétard N, Mazzucchelli G, Smargiasso N, Morsa D, Baiwir D, De Pauw E, Reenaers C, Van Kemseke C, Loly JP, Delvenne P, Meuwis MA, Louis E.

J Crohns Colitis. 2019 Jul 8. pii: jjz130. doi: 10.1093/ecco-jcc/jjz130. [Epub ahead of print]


Multi-Enzymatic Limited Digestion: The Next-Generation Sequencing for Proteomics?

Morsa D, Baiwir D, La Rocca R, Zimmerman TA, Hanozin E, Grifnée E, Longuespée R, Meuwis MA, Smargiasso N, Pauw E, Mazzucchelli G.

J Proteome Res. 2019 Jun 7;18(6):2501-2513. doi: 10.1021/acs.jproteome.9b00044. Epub 2019 May 10.


The N-glycan profile of the peritrophic membrane in the Colorado potato beetle larva (Leptinotarsa decemlineata).

Liu D, De Schutter K, Smargiasso N, De Pauw E, Van Damme EJM, Smagghe G.

J Insect Physiol. 2019 May - Jun;115:27-32. doi: 10.1016/j.jinsphys.2019.03.009. Epub 2019 Mar 29.


The N-glycome of the hemipteran pest insect Nilaparvata lugens reveals unexpected sex differences.

Scheys F, De Schutter K, Shen Y, Yu N, Smargiasso N, De Pauw E, Van Damme EJM, Smagghe G.

Insect Biochem Mol Biol. 2019 Apr;107:39-45. doi: 10.1016/j.ibmb.2019.01.008. Epub 2019 Jan 28.


Microproteomic Profiling of High-Grade Squamous Intraepithelial Lesion of the Cervix: Insight into Biological Mechanisms of Dysplasia and New Potential Diagnostic Markers.

Pottier C, Kriegsmann M, Alberts D, Smargiasso N, Baiwir D, Mazzucchelli G, Herfs M, Fresnais M, Casadonte R, Delvenne P, De Pauw E, Longuespée R.

Proteomics Clin Appl. 2019 Jan;13(1):e1800052. doi: 10.1002/prca.201800052. Epub 2018 Aug 23.


Jug r 6 is the allergenic vicilin present in walnut responsible for IgE cross-reactivities to other tree nuts and seeds.

Dubiela P, Kabasser S, Smargiasso N, Geiselhart S, Bublin M, Hafner C, Mazzucchelli G, Hoffmann-Sommergruber K.

Sci Rep. 2018 Jul 27;8(1):11366. doi: 10.1038/s41598-018-29656-4.


Disulfide Connectivity Analysis of Peptides Bearing Two Intramolecular Disulfide Bonds Using MALDI In-Source Decay.

Massonnet P, Haler JRN, Upert G, Smargiasso N, Mourier G, Gilles N, Quinton L, De Pauw E.

J Am Soc Mass Spectrom. 2018 Oct;29(10):1995-2002. doi: 10.1007/s13361-018-2022-y. Epub 2018 Jul 9.


Laser Microdissection-Based Microproteomics of Formalin-Fixed and Paraffin-Embedded (FFPE) Tissues.

Longuespée R, Baiwir D, Mazzucchelli G, Smargiasso N, De Pauw E.

Methods Mol Biol. 2018;1723:19-31. doi: 10.1007/978-1-4939-7558-7_2.


G-Quadruplex DNA Motifs in the Malaria Parasite Plasmodium falciparum and Their Potential as Novel Antimalarial Drug Targets.

Harris LM, Monsell KR, Noulin F, Famodimu MT, Smargiasso N, Damblon C, Horrocks P, Merrick CJ.

Antimicrob Agents Chemother. 2018 Feb 23;62(3). pii: e01828-17. doi: 10.1128/AAC.01828-17. Print 2018 Mar.


Reaction Product Variability and Biological Activity of the Lactoperoxidase System Depending on Medium Ionic Strength and pH, and on Substrate Relative Concentration.

Bafort F, Damblon C, Smargiasso N, De Pauw E, Perraudin JP, Jijakli MH.

Chem Biodivers. 2018 Mar;15(3):e1700497. doi: 10.1002/cbdv.201700497. Epub 2018 Mar 7.


MALDI Imaging Combined with Laser Microdissection-Based Microproteomics for Protein Identification: Application to Intratumor Heterogeneity Studies.

Longuespée R, Alberts D, Baiwir D, Mazzucchelli G, Smargiasso N, De Pauw E.

Methods Mol Biol. 2018;1788:297-312. doi: 10.1007/7651_2017_114.


In-Depth Glyco-Peptidomics Approach Reveals Unexpected Diversity of Glycosylated Peptides and Atypical Post-Translational Modifications in Dendroaspis angusticeps Snake Venom.

Degueldre M, Echterbille J, Smargiasso N, Damblon C, Gouin C, Mourier G, Gilles N, De Pauw E, Quinton L.

Int J Mol Sci. 2017 Nov 18;18(11). pii: E2453. doi: 10.3390/ijms18112453.


Activity of the purified plant ABC transporter NtPDR1 is stimulated by diterpenes and sesquiterpenes involved in constitutive and induced defenses.

Pierman B, Toussaint F, Bertin A, Lévy D, Smargiasso N, De Pauw E, Boutry M.

J Biol Chem. 2017 Nov 24;292(47):19491-19502. doi: 10.1074/jbc.M117.811935. Epub 2017 Sep 29.


MALDI Imaging-Guided Microproteomic Analyses of Heterogeneous Breast Tumors-A Pilot Study.

Alberts D, Pottier C, Smargiasso N, Baiwir D, Mazzucchelli G, Delvenne P, Kriegsmann M, Kazdal D, Warth A, De Pauw E, Longuespée R.

Proteomics Clin Appl. 2018 Jan;12(1). doi: 10.1002/prca.201700062. Epub 2017 Sep 15.


Inactivation of the β(1,2)-xylosyltransferase and the α(1,3)-fucosyltransferase genes in Nicotiana tabacum BY-2 Cells by a Multiplex CRISPR/Cas9 Strategy Results in Glycoproteins without Plant-Specific Glycans.

Mercx S, Smargiasso N, Chaumont F, De Pauw E, Boutry M, Navarre C.

Front Plant Sci. 2017 Mar 27;8:403. doi: 10.3389/fpls.2017.00403. eCollection 2017.


OLFM4, KNG1 and Sec24C identified by proteomics and immunohistochemistry as potential markers of early colorectal cancer stages.

Quesada-Calvo F, Massot C, Bertrand V, Longuespée R, Blétard N, Somja J, Mazzucchelli G, Smargiasso N, Baiwir D, De Pauw-Gillet MC, Delvenne P, Malaise M, Coimbra Marques C, Polus M, De Pauw E, Meuwis MA, Louis E.

Clin Proteomics. 2017 Mar 24;14:9. doi: 10.1186/s12014-017-9143-3. eCollection 2017.


N-Glycosylation of an IgG antibody secreted by Nicotiana tabacum BY-2 cells can be modulated through co-expression of human β-1,4-galactosyltransferase.

Navarre C, Smargiasso N, Duvivier L, Nader J, Far J, De Pauw E, Boutry M.

Transgenic Res. 2017 Jun;26(3):375-384. doi: 10.1007/s11248-017-0013-6. Epub 2017 Mar 22.


Proteomic signatures reveal a dualistic and clinically relevant classification of anal canal carcinoma.

Herfs M, Longuespée R, Quick CM, Roncarati P, Suarez-Carmona M, Hubert P, Lebeau A, Bruyere D, Mazzucchelli G, Smargiasso N, Baiwir D, Lai K, Dunn A, Obregon F, Yang EJ, Pauw E, Crum CP, Delvenne P.

J Pathol. 2017 Mar;241(4):522-533. doi: 10.1002/path.4858. Epub 2017 Jan 27.


Methylglyoxal, a glycolysis side-product, induces Hsp90 glycation and YAP-mediated tumor growth and metastasis.

Nokin MJ, Durieux F, Peixoto P, Chiavarina B, Peulen O, Blomme A, Turtoi A, Costanza B, Smargiasso N, Baiwir D, Scheijen JL, Schalkwijk CG, Leenders J, De Tullio P, Bianchi E, Thiry M, Uchida K, Spiegel DA, Cochrane JR, Hutton CA, De Pauw E, Delvenne P, Belpomme D, Castronovo V, Bellahcène A.

Elife. 2016 Oct 19;5. pii: e19375. doi: 10.7554/eLife.19375.


Protein N-glycosylation and N-glycan trimming are required for postembryonic development of the pest beetle Tribolium castaneum.

Walski T, Van Damme EJ, Smargiasso N, Christiaens O, De Pauw E, Smagghe G.

Sci Rep. 2016 Oct 12;6:35151. doi: 10.1038/srep35151.


A Phenotypic and Genotypic Analysis of the Antimicrobial Potential of Cultivable Streptomyces Isolated from Cave Moonmilk Deposits.

Maciejewska M, Adam D, Martinet L, Naômé A, Całusińska M, Delfosse P, Carnol M, Barton HA, Hayette MP, Smargiasso N, De Pauw E, Hanikenne M, Baurain D, Rigali S.

Front Microbiol. 2016 Sep 21;7:1455. eCollection 2016.


Ion Mobility-Mass Spectrometry as a Tool for the Structural Characterization of Peptides Bearing Intramolecular Disulfide Bond(s).

Massonnet P, Haler JR, Upert G, Degueldre M, Morsa D, Smargiasso N, Mourier G, Gilles N, Quinton L, De Pauw E.

J Am Soc Mass Spectrom. 2016 Oct;27(10):1637-46. doi: 10.1007/s13361-016-1443-8. Epub 2016 Aug 3.


Interaction of Avibactam with Class B Metallo-β-Lactamases.

Abboud MI, Damblon C, Brem J, Smargiasso N, Mercuri P, Gilbert B, Rydzik AM, Claridge TD, Schofield CJ, Frère JM.

Antimicrob Agents Chemother. 2016 Sep 23;60(10):5655-62. doi: 10.1128/AAC.00897-16. Print 2016 Oct.


Estimation of peptide N-Cα bond cleavage efficiency during MALDI-ISD using a cyclic peptide.

Asakawa D, Smargiasso N, De Pauw E.

J Mass Spectrom. 2016 May;51(5):323-7. doi: 10.1002/jms.3748.


An Improved Molecular Histology Method for Ion Suppression Monitoring and Quantification of Phosphatidyl Cholines During MALDI MSI Lipidomics Analyses.

Jadoul L, Smargiasso N, Pamelard F, Alberts D, Noël A, De Pauw E, Longuespée R.

OMICS. 2016 Feb;20(2):110-21. doi: 10.1089/omi.2015.0165.


Determination of the substrate repertoire of ADAMTS2, 3, and 14 significantly broadens their functions and identifies extracellular matrix organization and TGF-β signaling as primary targets.

Bekhouche M, Leduc C, Dupont L, Janssen L, Delolme F, Vadon-Le Goff S, Smargiasso N, Baiwir D, Mazzucchelli G, Zanella-Cleon I, Dubail J, De Pauw E, Nusgens B, Hulmes DJ, Moali C, Colige A.

FASEB J. 2016 May;30(5):1741-56. doi: 10.1096/fj.15-279869. Epub 2016 Jan 6.


A laser microdissection-based workflow for FFPE tissue microproteomics: Important considerations for small sample processing.

Longuespée R, Alberts D, Pottier C, Smargiasso N, Mazzucchelli G, Baiwir D, Kriegsmann M, Herfs M, Kriegsmann J, Delvenne P, De Pauw E.

Methods. 2016 Jul 15;104:154-62. doi: 10.1016/j.ymeth.2015.12.008. Epub 2015 Dec 12.


Combined use of ion mobility and collision-induced dissociation to investigate the opening of disulfide bridges by electron-transfer dissociation in peptides bearing two disulfide bonds.

Massonnet P, Upert G, Smargiasso N, Gilles N, Quinton L, De Pauw E.

Anal Chem. 2015;87(10):5240-6. doi: 10.1021/acs.analchem.5b00245. Epub 2015 May 7.


Comparison of two FFPE preparation methods using label-free shotgun proteomics: Application to tissues of diverticulitis patients.

Quesada-Calvo F, Bertrand V, Longuespée R, Delga A, Mazzucchelli G, Smargiasso N, Baiwir D, Delvenne P, Malaise M, De Pauw-Gillet MC, De Pauw E, Louis E, Meuwis MA.

J Proteomics. 2015 Jan 1;112:250-61. doi: 10.1016/j.jprot.2014.08.013. Epub 2014 Sep 10.


Tissue proteomics for the next decade? Towards a molecular dimension in histology.

Longuespée R, Fléron M, Pottier C, Quesada-Calvo F, Meuwis MA, Baiwir D, Smargiasso N, Mazzucchelli G, De Pauw-Gillet MC, Delvenne P, De Pauw E.

OMICS. 2014 Sep;18(9):539-52. doi: 10.1089/omi.2014.0033. Epub 2014 Aug 8. Review.


Spatiotemporal monitoring of the antibiome secreted by Bacillus biofilms on plant roots using MALDI mass spectrometry imaging.

Debois D, Jourdan E, Smargiasso N, Thonart P, De Pauw E, Ongena M.

Anal Chem. 2014 May 6;86(9):4431-8. doi: 10.1021/ac500290s. Epub 2014 Apr 22.


Influences of proline and cysteine residues on fragment yield in matrix-assisted laser desorption/ionization in-source decay mass spectrometry.

Asakawa D, Smargiasso N, Quinton L, De Pauw E.

J Am Soc Mass Spectrom. 2014 Jun;25(6):1040-8. doi: 10.1007/s13361-014-0868-1. Epub 2014 Apr 4.


New approach for pseudo-MS(3) analysis of peptides and proteins via MALDI in-source decay using radical recombination with 1,5-diaminonaphthalene.

Asakawa D, Smargiasso N, De Pauw E.

Anal Chem. 2014 Mar 4;86(5):2451-7. doi: 10.1021/ac403285b. Epub 2014 Feb 18.


Der p 1 is the primary activator of Der p 3, Der p 6 and Der p 9 the proteolytic allergens produced by the house dust mite Dermatophagoides pteronyssinus.

Herman J, Thelen N, Smargiasso N, Mailleux AC, Luxen A, Cloes M, De Pauw E, Chevigné A, Galleni M, Dumez ME.

Biochim Biophys Acta. 2014 Mar;1840(3):1117-24. doi: 10.1016/j.bbagen.2013.11.017. Epub 2013 Nov 27.


Use of 1,5-diaminonaphthalene to combine matrix-assisted laser desorption/ionization in-source decay fragmentation with hydrogen/deuterium exchange.

Lemaire P, Debois D, Smargiasso N, Quinton L, Gabelica V, De Pauw EA.

Rapid Commun Mass Spectrom. 2013 Aug 30;27(16):1837-46. doi: 10.1002/rcm.6627.


Peptide backbone fragmentation initiated by side-chain loss at cysteine residue in matrix-assisted laser desorption/ionization in-source decay mass spectrometry.

Asakawa D, Smargiasso N, Quinton L, De Pauw E.

J Mass Spectrom. 2013 Mar;48(3):352-60. doi: 10.1002/jms.3182.


Ultraviolet laser induced hydrogen transfer reaction: study of the first step of MALDI in-source decay mass spectrometry.

Asakawa D, Calligaris D, Smargiasso N, De Pauw E.

J Phys Chem B. 2013 Feb 28;117(8):2321-7. doi: 10.1021/jp311464k. Epub 2013 Feb 13.


Discrimination of isobaric Leu/Ile residues by MALDI in-source decay mass spectrometry.

Asakawa D, Smargiasso N, De Pauw E.

J Am Soc Mass Spectrom. 2013 Feb;24(2):297-300. doi: 10.1007/s13361-012-0523-7. Epub 2013 Jan 11.


MALDI in-source decay, from sequencing to imaging.

Debois D, Smargiasso N, Demeure K, Asakawa D, Zimmerman TA, Quinton L, De Pauw E.

Top Curr Chem. 2013;331:117-41. doi: 10.1007/128_2012_363. Review.


Identification and relative-quantification of glycans by matrix-assisted laser desorption/ionization in-source decay with hydrogen abstraction.

Asakawa D, Smargiasso N, De Pauw E.

Anal Chem. 2012 Sep 4;84(17):7463-8. doi: 10.1021/ac3014737. Epub 2012 Aug 20.


2-Aminobenzamide and 2-aminobenzoic acid as new MALDI matrices inducing radical mediated in-source decay of peptides and proteins.

Smargiasso N, Quinton L, De Pauw E.

J Am Soc Mass Spectrom. 2012 Mar;23(3):469-74. doi: 10.1007/s13361-011-0307-5. Epub 2011 Dec 20.


An unusual family of glycosylated peptides isolated from Dendroaspis angusticeps venom and characterized by combination of collision induced and electron transfer dissociation.

Quinton L, Gilles N, Smargiasso N, Kiehne A, De Pauw E.

J Am Soc Mass Spectrom. 2011 Nov;22(11):1891-7. doi: 10.1007/s13361-011-0210-0. Epub 2011 Jul 29.


Optimization of matrix conditions for the control of MALDI in-source decay of permethylated glycans.

Smargiasso N, De Pauw E.

Anal Chem. 2010 Nov 15;82(22):9248-53. doi: 10.1021/ac1017452. Epub 2010 Oct 28.


Cation involvement in telomestatin binding to g-quadruplex DNA.

Rosu F, Gabelica V, Smargiasso N, Mazzucchelli G, Shin-Ya K, De Pauw E.

J Nucleic Acids. 2010;2010. pii: 121259. doi: 10.4061/2010/121259. Epub 2010 Jun 16.


Putative DNA G-quadruplex formation within the promoters of Plasmodium falciparum var genes.

Smargiasso N, Gabelica V, Damblon C, Rosu F, De Pauw E, Teulade-Fichou MP, Rowe JA, Claessens A.

BMC Genomics. 2009 Aug 6;10:362. doi: 10.1186/1471-2164-10-362.


G-quadruplex DNA assemblies: loop length, cation identity, and multimer formation.

Smargiasso N, Rosu F, Hsia W, Colson P, Baker ES, Bowers MT, De Pauw E, Gabelica V.

J Am Chem Soc. 2008 Aug 6;130(31):10208-16. doi: 10.1021/ja801535e. Epub 2008 Jul 16.


Proteome alteration induced by hTERT transfection of human fibroblast cells.

Mazzucchelli GD, Gabelica V, Smargiasso N, Fléron M, Ashimwe W, Rosu F, De Pauw-Gillet MC, Riou JF, De Pauw E.

Proteome Sci. 2008 Apr 17;6:12. doi: 10.1186/1477-5956-6-12.

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