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Items: 1 to 50 of 64

1.

Draft Genome Sequence of the Symbiotically Competent Cyanobacterium Nostoc sp. Strain KVJ20.

Halsør MH, Liaimer A, Pandur S, Ræder ILU, Smalås AO, Altermark B.

Microbiol Resour Announc. 2019 Nov 7;8(45). pii: e01190-19. doi: 10.1128/MRA.01190-19.

2.

Features and structure of a cold active N-acetylneuraminate lyase.

Gurung MK, Altermark B, Helland R, Smalås AO, Ræder ILU.

PLoS One. 2019 Jun 11;14(6):e0217713. doi: 10.1371/journal.pone.0217713. eCollection 2019.

3.

Isolation and complete genome sequence of the thermophilic Geobacillus sp. 12AMOR1 from an Arctic deep-sea hydrothermal vent site.

Wissuwa J, Stokke R, Fedøy AE, Lian K, Smalås AO, Steen IH.

Stand Genomic Sci. 2016 Feb 24;11:16. doi: 10.1186/s40793-016-0137-y. eCollection 2016.

4.

Structural and functional characterization of two unusual endonuclease III enzymes from Deinococcus radiodurans.

Sarre A, Ökvist M, Klar T, Hall DR, Smalås AO, McSweeney S, Timmins J, Moe E.

J Struct Biol. 2015 Aug;191(2):87-99. doi: 10.1016/j.jsb.2015.05.009. Epub 2015 Jul 11.

PMID:
26172070
5.

Characterization of the N-acetylneuraminic acid synthase (NeuB) from the psychrophilic fish pathogen Moritella viscosa.

Berg TO, Gurung MK, Altermark B, Smalås AO, Ræder IL.

Carbohydr Res. 2015 Jan 30;402:133-45. doi: 10.1016/j.carres.2014.10.007. Epub 2014 Oct 20.

PMID:
25498013
6.

High quality draft genome sequence of Streptomyces sp. strain AW19M42 isolated from a sea squirt in Northern Norway.

Bjerga GE, Hjerde E, De Santi C, Williamson AK, Smalås AO, Willassen NP, Altermark B.

Stand Genomic Sci. 2014 Mar 1;9(3):676-86. doi: 10.4056/sigs.5038901. eCollection 2014 Jun 15.

7.

Structural and biophysical analysis of interactions between cod and human uracil-DNA N-glycosylase (UNG) and UNG inhibitor (Ugi).

Assefa NG, Niiranen L, Johnson KA, Leiros HK, Smalås AO, Willassen NP, Moe E.

Acta Crystallogr D Biol Crystallogr. 2014 Aug;70(Pt 8):2093-100. doi: 10.1107/S1399004714011699. Epub 2014 Jul 25.

8.

Draft Genome Sequence of the Actinomycete Rhodococcus sp. Strain AW25M09, Isolated from the Hadsel Fjord, Northern Norway.

Hjerde E, Pierechod MM, Williamson AK, Bjerga GE, Willassen NP, Smalås AO, Altermark B.

Genome Announc. 2013 Mar 7;1(2):e0005513. doi: 10.1128/genomeA.00055-13.

9.

Characterization of the sialic acid synthase from Aliivibrio salmonicida suggests a novel pathway for bacterial synthesis of 7-O-acetylated sialic acids.

Gurung MK, Ræder IL, Altermark B, Smalås AO.

Glycobiology. 2013 Jul;23(7):806-19. doi: 10.1093/glycob/cwt018. Epub 2013 Mar 11.

PMID:
23481098
10.

Thermodynamics and structure of a salmon cold active goose-type lysozyme.

Kyomuhendo P, Myrnes B, Brandsdal BO, Smalås AO, Nilsen IW, Helland R.

Comp Biochem Physiol B Biochem Mol Biol. 2010 Aug;156(4):254-63. doi: 10.1016/j.cbpb.2010.04.002. Epub 2010 Apr 14.

PMID:
20398783
11.

Structure of uracil-DNA N-glycosylase (UNG) from Vibrio cholerae: mapping temperature adaptation through structural and mutational analysis.

Raeder IL, Moe E, Willassen NP, Smalås AO, Leiros I.

Acta Crystallogr Sect F Struct Biol Cryst Commun. 2010 Feb 1;66(Pt 2):130-6. doi: 10.1107/S1744309109052063. Epub 2010 Jan 26.

12.

Structure of a highly stable mutant of human fibroblast growth factor 1.

Szlachcic A, Zakrzewska M, Krowarsch D, Os V, Helland R, Smalås AO, Otlewski J.

Acta Crystallogr D Biol Crystallogr. 2009 Jan;65(Pt 1):67-73. doi: 10.1107/S0907444908039486. Epub 2008 Dec 18.

PMID:
19153468
13.

Structural evidence for lack of inhibition of fish goose-type lysozymes by a bacterial inhibitor of lysozyme.

Kyomuhendo P, Nilsen IW, Brandsdal BO, Smalås AO.

J Mol Model. 2008 Sep;14(9):777-88. doi: 10.1007/s00894-008-0317-9. Epub 2008 May 20.

PMID:
18491152
14.

Structural adaptation of endonuclease I from the cold-adapted and halophilic bacterium Vibrio salmonicida.

Altermark B, Helland R, Moe E, Willassen NP, Smalås AO.

Acta Crystallogr D Biol Crystallogr. 2008 Apr;64(Pt 4):368-76. doi: 10.1107/S0907444908000097. Epub 2008 Mar 19.

PMID:
18391403
15.

Effects of salt on the kinetics and thermodynamic stability of endonuclease I from Vibrio salmonicida and Vibrio cholerae.

Niiranen L, Altermark B, Brandsdal BO, Leiros HK, Helland R, Smalås AO, Willassen NP.

FEBS J. 2008 Apr;275(7):1593-605. doi: 10.1111/j.1742-4658.2008.06317.x. Epub 2008 Feb 27.

16.

Electrostatic interactions play an essential role in DNA repair and cold-adaptation of uracil DNA glycosylase.

Olufsen M, Smalås AO, Brandsdal BO.

J Mol Model. 2008 Mar;14(3):201-13. doi: 10.1007/s00894-007-0261-0. Epub 2008 Jan 15.

PMID:
18196298
17.

Ion pairs and their role in modulating stability of cold- and warm-active uracil DNA glycosylase.

Olufsen M, Papaleo E, Smalås AO, Brandsdal BO.

Proteins. 2008 May 15;71(3):1219-30.

PMID:
18004790
18.

Sequence comparison and environmental adaptation of a bacterial endonuclease.

Altermark B, Thorvaldsen S, Moe E, Smalås AO, Willassen NP.

Comput Biol Chem. 2007 Jun;31(3):163-72. Epub 2007 Mar 24.

PMID:
17500034
19.

The first structure of a cold-active catalase from Vibrio salmonicida at 1.96 A reveals structural aspects of cold adaptation.

Riise EK, Lorentzen MS, Helland R, Smalås AO, Leiros HK, Willassen NP.

Acta Crystallogr D Biol Crystallogr. 2007 Feb;63(Pt 2):135-48. Epub 2007 Jan 16.

PMID:
17242507
20.

Comparative studies of endonuclease I from cold-adapted Vibrio salmonicida and mesophilic Vibrio cholerae.

Altermark B, Niiranen L, Willassen NP, Smalås AO, Moe E.

FEBS J. 2007 Jan;274(1):252-63.

21.

Effect of fish skin mucus on the soluble proteome of Vibrio salmonicida analysed by 2-D gel electrophoresis and tandem mass spectrometry.

Raeder IL, Paulsen SM, Smalås AO, Willassen NP.

Microb Pathog. 2007 Jan;42(1):36-45. Epub 2006 Dec 4.

PMID:
17145162
22.
23.

The structure of Vibrio cholerae extracellular endonuclease I reveals the presence of a buried chloride ion.

Altermark B, Smalås AO, Willassen NP, Helland R.

Acta Crystallogr D Biol Crystallogr. 2006 Nov;62(Pt 11):1387-91. Epub 2006 Oct 18.

PMID:
17057343
24.

Free energy calculations show that acidic P1 variants undergo large pKa shifts upon binding to trypsin.

Brandsdal BO, Smalås AO, Aqvist J.

Proteins. 2006 Aug 15;64(3):740-8.

PMID:
16752417
25.

Predicting proteinase specificities from free energy calculations.

Mekonnen SM, Olufsen M, Smalås AO, Brandsdal BO.

J Mol Graph Model. 2006 Oct;25(2):176-85. Epub 2006 Jan 10.

PMID:
16386933
26.

The 1.8 A crystal structure of a proteinase K-like enzyme from a psychrotroph Serratia species.

Helland R, Larsen AN, Smalås AO, Willassen NP.

FEBS J. 2006 Jan;273(1):61-71.

27.

Probing the effect of point mutations at protein-protein interfaces with free energy calculations.

Almlöf M, Aqvist J, Smalås AO, Brandsdal BO.

Biophys J. 2006 Jan 15;90(2):433-42. Epub 2005 Nov 4.

28.
29.

Structure of the uracil-DNA N-glycosylase (UNG) from Deinococcus radiodurans.

Leiros I, Moe E, Smalås AO, McSweeney S.

Acta Crystallogr D Biol Crystallogr. 2005 Aug;61(Pt 8):1049-56. Epub 2005 Jul 20.

PMID:
16041069
30.

Structure-function relationships in serine protease-bovine pancreatic trypsin inhibitor interaction.

Krowarsch D, Zakrzewska M, Smalas AO, Otlewski J.

Protein Pept Lett. 2005 Jul;12(5):403-7. Review.

PMID:
16029151
31.

Increased flexibility as a strategy for cold adaptation: a comparative molecular dynamics study of cold- and warm-active uracil DNA glycosylase.

Olufsen M, Smalås AO, Moe E, Brandsdal BO.

J Biol Chem. 2005 May 6;280(18):18042-8. Epub 2005 Mar 3.

32.

Crystal structures of five bovine chymotrypsin complexes with P1 BPTI variants.

Czapinska H, Helland R, Smalås AO, Otlewski J.

J Mol Biol. 2004 Dec 3;344(4):1005-20.

PMID:
15544809
33.

Trypsin specificity as elucidated by LIE calculations, X-ray structures, and association constant measurements.

Leiros HK, Brandsdal BO, Andersen OA, Os V, Leiros I, Helland R, Otlewski J, Willassen NP, Smalås AO.

Protein Sci. 2004 Apr;13(4):1056-70.

34.

Structural consequences of accommodation of four non-cognate amino acid residues in the S1 pocket of bovine trypsin and chymotrypsin.

Helland R, Czapinska H, Leiros I, Olufsen M, Otlewski J, Smalås AO.

J Mol Biol. 2003 Oct 31;333(4):845-61.

PMID:
14568540
35.

The structure of uracil-DNA glycosylase from Atlantic cod (Gadus morhua) reveals cold-adaptation features.

Leiros I, Moe E, Lanes O, Smalås AO, Willassen NP.

Acta Crystallogr D Biol Crystallogr. 2003 Aug;59(Pt 8):1357-65. Epub 2003 Jul 23.

PMID:
12876336
37.

Structure-function relationship of serine protease-protein inhibitor interaction.

Otlewski J, Jaskólski M, Buczek O, Cierpicki T, Czapińska H, Krowarsch D, Smalas AO, Stachowiak D, Szpineta A, Dadlez M.

Acta Biochim Pol. 2001;48(2):419-28. Review.

38.

Crystallization and preliminary X-ray diffraction analysis of a cold-adapted uracil-DNA glycosylase from Atlantic cod (Gadus morhua).

Leiros I, Lanes O, Sundheim O, Helland R, Smalås AO, Willassen NP.

Acta Crystallogr D Biol Crystallogr. 2001 Nov;57(Pt 11):1706-8. Epub 2001 Oct 25.

PMID:
11679752
39.

Computational analysis of binding of P1 variants to trypsin.

Brandsdal BO, Aqvist J, Smalås AO.

Protein Sci. 2001 Aug;10(8):1584-95.

40.

Electrostatic effects play a central role in cold adaptation of trypsin.

Brandsdal BO, Smalås AO, Aqvist J.

FEBS Lett. 2001 Jun 15;499(1-2):171-5.

41.

Environmental fate of chlorinated bornanes estimated by theoretical descriptors.

Heimstad ES, Smalås AO, Kallenborn R.

Chemosphere. 2001 May-Jun;43(4-7):665-74.

PMID:
11372851
42.

Atomic resolution structures of trypsin provide insight into structural radiation damage.

Leiros HK, McSweeney SM, Smalås AO.

Acta Crystallogr D Biol Crystallogr. 2001 Apr;57(Pt 4):488-97.

PMID:
11264577
43.

Cold adapted enzymes.

Smalås AO, Leiros HK, Os V, Willassen NP.

Biotechnol Annu Rev. 2000;6:1-57. Review.

PMID:
11193291
44.

Substitutions at the P(1) position in BPTI strongly affect the association energy with serine proteinases.

Grzesiak A, Helland R, Smalås AO, Krowarsch D, Dadlez M, Otlewski J.

J Mol Biol. 2000 Aug 4;301(1):205-17.

PMID:
10926503
45.
46.

Evaluation of protein-protein association energies by free energy perturbation calculations.

Brandsdal BO, Smalås AO.

Protein Eng. 2000 Apr;13(4):239-45.

PMID:
10810154
47.
48.

Comparative molecular dynamics of mesophilic and psychrophilic protein homologues studied by 1.2 ns simulations.

Brandsdal BO, Heimstad ES, Sylte I, Smalås AO.

J Biomol Struct Dyn. 1999 Dec;17(3):493-506.

PMID:
10636084
49.

Residue determinants and sequence analysis of cold-adapted trypsins.

Leiros HK, Willassen NP, Smalås AO.

Extremophiles. 1999 Aug;3(3):205-19.

PMID:
10484177
50.

Interscaffolding additivity: binding of P1 variants of bovine pancreatic trypsin inhibitor to four serine proteases.

Krowarsch D, Dadlez M, Buczek O, Krokoszynska I, Smalas AO, Otlewski J.

J Mol Biol. 1999 May 28;289(1):175-86.

PMID:
10339415

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