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Amyloid-like Assembly Activates a Phosphatase in the Developing Drosophila Embryo.

Nil Z, Millán RH, Gerbich T, Leal P, Yu Z, Saraf A, Sardiu M, Lange JJ, Yi K, Unruh J, Slaughter B, Si K.

Cell. 2019 Sep 5;178(6):1403-1420.e21. doi: 10.1016/j.cell.2019.08.019.


The stoichiometry of the outer kinetochore is modulated by microtubule-proximal regulatory factors.

Dhatchinamoorthy K, Unruh JR, Lange JJ, Levy M, Slaughter BD, Gerton JL.

J Cell Biol. 2019 Jul 1;218(7):2124-2135. doi: 10.1083/jcb.201810070. Epub 2019 May 22.


Yeast centrosome components form a noncanonical LINC complex at the nuclear envelope insertion site.

Chen J, Gardner JM, Yu Z, Smith SE, McKinney S, Slaughter BD, Unruh JR, Jaspersen SL.

J Cell Biol. 2019 May 6;218(5):1478-1490. doi: 10.1083/jcb.201809045. Epub 2019 Mar 12.


Imaging-based assays for investigating functions of the RNA polymerase II elongation factor Elongin and the Elongin ubiquitin ligase.

Weems JC, Unruh JR, Slaughter BD, Conaway RC, Conaway JW.

Methods. 2019 Apr 15;159-160:157-164. doi: 10.1016/j.ymeth.2019.02.015. Epub 2019 Feb 19.


Functional Analysis of the Yeast LINC Complex Using Fluctuation Spectroscopy and Super-Resolution Imaging.

Unruh JR, Slaughter BD, Jaspersen SL.

Methods Mol Biol. 2018;1840:137-161. doi: 10.1007/978-1-4939-8691-0_12.


Combined expansion microscopy with structured illumination microscopy for analyzing protein complexes.

Wang Y, Yu Z, Cahoon CK, Parmely T, Thomas N, Unruh JR, Slaughter BD, Hawley RS.

Nat Protoc. 2018 Aug;13(8):1869-1895. doi: 10.1038/s41596-018-0023-8. Epub 2018 Aug 2.


The anatomy of a nucleus: As revealed by chromosome painting.

Slaughter BD, Hawley RS.

PLoS Genet. 2018 Jul 12;14(7):e1007445. doi: 10.1371/journal.pgen.1007445. eCollection 2018 Jul. No abstract available.


Integrative structure and functional anatomy of a nuclear pore complex.

Kim SJ, Fernandez-Martinez J, Nudelman I, Shi Y, Zhang W, Raveh B, Herricks T, Slaughter BD, Hogan JA, Upla P, Chemmama IE, Pellarin R, Echeverria I, Shivaraju M, Chaudhury AS, Wang J, Williams R, Unruh JR, Greenberg CH, Jacobs EY, Yu Z, de la Cruz MJ, Mironska R, Stokes DL, Aitchison JD, Jarrold MF, Gerton JL, Ludtke SJ, Akey CW, Chait BT, Sali A, Rout MP.

Nature. 2018 Mar 22;555(7697):475-482. doi: 10.1038/nature26003. Epub 2018 Mar 14.


Structural plasticity of the living kinetochore.

Dhatchinamoorthy K, Shivaraju M, Lange JJ, Rubinstein B, Unruh JR, Slaughter BD, Gerton JL.

J Cell Biol. 2017 Nov 6;216(11):3551-3570. doi: 10.1083/jcb.201703152. Epub 2017 Sep 22.


HOXA1 and TALE proteins display cross-regulatory interactions and form a combinatorial binding code on HOXA1 targets.

De Kumar B, Parker HJ, Paulson A, Parrish ME, Pushel I, Singh NP, Zhang Y, Slaughter BD, Unruh JR, Florens L, Zeitlinger J, Krumlauf R.

Genome Res. 2017 Sep;27(9):1501-1512. doi: 10.1101/gr.219386.116. Epub 2017 Aug 7.


Superresolution expansion microscopy reveals the three-dimensional organization of the Drosophila synaptonemal complex.

Cahoon CK, Yu Z, Wang Y, Guo F, Unruh JR, Slaughter BD, Hawley RS.

Proc Natl Acad Sci U S A. 2017 Aug 15;114(33):E6857-E6866. doi: 10.1073/pnas.1705623114. Epub 2017 Jul 31.


Condensin II is anchored by TFIIIC and H3K4me3 in the mammalian genome and supports the expression of active dense gene clusters.

Yuen KC, Slaughter BD, Gerton JL.

Sci Adv. 2017 Jun 21;3(6):e1700191. doi: 10.1126/sciadv.1700191. eCollection 2017 Jun.


Dynamic regulation of Nanog and stem cell-signaling pathways by Hoxa1 during early neuro-ectodermal differentiation of ES cells.

De Kumar B, Parker HJ, Parrish ME, Lange JJ, Slaughter BD, Unruh JR, Paulson A, Krumlauf R.

Proc Natl Acad Sci U S A. 2017 Jun 6;114(23):5838-5845. doi: 10.1073/pnas.1610612114.


Cockayne syndrome B protein regulates recruitment of the Elongin A ubiquitin ligase to sites of DNA damage.

Weems JC, Slaughter BD, Unruh JR, Boeing S, Hall SM, McLaird MB, Yasukawa T, Aso T, Svejstrup JQ, Conaway JW, Conaway RC.

J Biol Chem. 2017 Apr 21;292(16):6431-6437. doi: 10.1074/jbc.C117.777946. Epub 2017 Mar 14.


Analysis of membrane proteins localizing to the inner nuclear envelope in living cells.

Smoyer CJ, Katta SS, Gardner JM, Stoltz L, McCroskey S, Bradford WD, McClain M, Smith SE, Slaughter BD, Unruh JR, Jaspersen SL.

J Cell Biol. 2016 Nov 21;215(4):575-590. Epub 2016 Nov 9.


A Putative Biochemical Engram of Long-Term Memory.

Li L, Sanchez CP, Slaughter BD, Zhao Y, Khan MR, Unruh JR, Rubinstein B, Si K.

Curr Biol. 2016 Dec 5;26(23):3143-3156. doi: 10.1016/j.cub.2016.09.054. Epub 2016 Nov 3.


WDR76 Co-Localizes with Heterochromatin Related Proteins and Rapidly Responds to DNA Damage.

Gilmore JM, Sardiu ME, Groppe BD, Thornton JL, Liu X, Dayebgadoh G, Banks CA, Slaughter BD, Unruh JR, Workman JL, Florens L, Washburn MP.

PLoS One. 2016 Jun 1;11(6):e0155492. doi: 10.1371/journal.pone.0155492. eCollection 2016.


Versatile Synthesis and Fluorescent Labeling of ZIF-90 Nanoparticles for Biomedical Applications.

Jones CG, Stavila V, Conroy MA, Feng P, Slaughter BV, Ashley CE, Allendorf MD.

ACS Appl Mater Interfaces. 2016 Mar;8(12):7623-30. doi: 10.1021/acsami.5b11760. Epub 2016 Mar 17.


Molecular Basis of Orb2 Amyloidogenesis and Blockade of Memory Consolidation.

Hervás R, Li L, Majumdar A, Fernández-Ramírez Mdel C, Unruh JR, Slaughter BD, Galera-Prat A, Santana E, Suzuki M, Nagai Y, Bruix M, Casas-Tintó S, Menéndez M, Laurents DV, Si K, Carrión-Vázquez M.

PLoS Biol. 2016 Jan 26;14(1):e1002361. doi: 10.1371/journal.pbio.1002361. eCollection 2016 Jan.


Karyotyping human and mouse cells using probes from single-sorted chromosomes and open source software.

Potapova TA, Unruh JR, Box AC, Bradford WD, Seidel CW, Slaughter BD, Sivagnanam S, Wu Y, Li R.

Biotechniques. 2015 Dec 1;59(6):335-6, 338, 340-2 passim. doi: 10.2144/000114362. eCollection 2015 Dec.


Amyloidogenic Oligomerization Transforms Drosophila Orb2 from a Translation Repressor to an Activator.

Khan MR, Li L, Pérez-Sánchez C, Saraf A, Florens L, Slaughter BD, Unruh JR, Si K.

Cell. 2015 Dec 3;163(6):1468-83. doi: 10.1016/j.cell.2015.11.020.


Mitotic Transcriptional Activation: Clearance of Actively Engaged Pol II via Transcriptional Elongation Control in Mitosis.

Liang K, Woodfin AR, Slaughter BD, Unruh JR, Box AC, Rickels RA, Gao X, Haug JS, Jaspersen SL, Shilatifard A.

Mol Cell. 2015 Nov 5;60(3):435-45. doi: 10.1016/j.molcel.2015.09.021.


Sec66-Dependent Regulation of Yeast Spindle-Pole Body Duplication Through Pom152.

Katta SS, Chen J, Gardner JM, Friederichs JM, Smith SE, Gogol M, Unruh JR, Slaughter BD, Jaspersen SL.

Genetics. 2015 Dec;201(4):1479-95. doi: 10.1534/genetics.115.178012. Epub 2015 Oct 28.


Vilya, a component of the recombination nodule, is required for meiotic double-strand break formation in Drosophila.

Lake CM, Nielsen RJ, Guo F, Unruh JR, Slaughter BD, Hawley RS.

Elife. 2015 Oct 9;4:e08287. doi: 10.7554/eLife.08287.


Dynamic swelling behavior of interpenetrating polymer networks in response to temperature and pH.

Slaughter BV, Blanchard AT, Maass KF, Peppas NA.

J Appl Polym Sci. 2015 Jun 20;132(24). pii: 42076.


Structured illumination with particle averaging reveals novel roles for yeast centrosome components during duplication.

Burns S, Avena JS, Unruh JR, Yu Z, Smith SE, Slaughter BD, Winey M, Jaspersen SL.

Elife. 2015 Sep 15;4. doi: 10.7554/eLife.08586.


Analysis of dynamic changes in retinoid-induced transcription and epigenetic profiles of murine Hox clusters in ES cells.

De Kumar B, Parrish ME, Slaughter BD, Unruh JR, Gogol M, Seidel C, Paulson A, Li H, Gaudenz K, Peak A, McDowell W, Fleharty B, Ahn Y, Lin C, Smith E, Shilatifard A, Krumlauf R.

Genome Res. 2015 Aug;25(8):1229-43. doi: 10.1101/gr.184978.114. Epub 2015 May 29.


Assembly of the Elongin A Ubiquitin Ligase Is Regulated by Genotoxic and Other Stresses.

Weems JC, Slaughter BD, Unruh JR, Hall SM, McLaird MB, Gilmore JM, Washburn MP, Florens L, Yasukawa T, Aso T, Conaway JW, Conaway RC.

J Biol Chem. 2015 Jun 12;290(24):15030-41. doi: 10.1074/jbc.M114.632794. Epub 2015 Apr 15.


Imaging methodologies for systems biology.

Smith SE, Slaughter BD, Unruh JR.

Cell Adh Migr. 2014;8(5):468-77. doi: 10.4161/cam.29152. Epub 2014 Nov 1. Review.


Organelle-based aggregation and retention of damaged proteins in asymmetrically dividing cells.

Zhou C, Slaughter BD, Unruh JR, Guo F, Yu Z, Mickey K, Narkar A, Ross RT, McClain M, Li R.

Cell. 2014 Oct 23;159(3):530-42. doi: 10.1016/j.cell.2014.09.026. Epub 2014 Oct 16.


The membrane-associated proteins FCHo and SGIP are allosteric activators of the AP2 clathrin adaptor complex.

Hollopeter G, Lange JJ, Zhang Y, Vu TN, Gu M, Ailion M, Lambie EJ, Slaughter BD, Unruh JR, Florens L, Jorgensen EM.

Elife. 2014 Oct 10;3. doi: 10.7554/eLife.03648.


Corolla is a novel protein that contributes to the architecture of the synaptonemal complex of Drosophila.

Collins KA, Unruh JR, Slaughter BD, Yu Z, Lake CM, Nielsen RJ, Box KS, Miller DE, Blumenstiel JP, Perera AG, Malanowski KE, Hawley RS.

Genetics. 2014 Sep;198(1):219-28. doi: 10.1534/genetics.114.165290. Epub 2014 Jun 9.


The SUN protein Mps3 controls Ndc1 distribution and function on the nuclear membrane.

Chen J, Smoyer CJ, Slaughter BD, Unruh JR, Jaspersen SL.

J Cell Biol. 2014 Feb 17;204(4):523-39. doi: 10.1083/jcb.201307043. Epub 2014 Feb 10.


Cohesion promotes nucleolar structure and function.

Harris B, Bose T, Lee KK, Wang F, Lu S, Ross RT, Zhang Y, French SL, Beyer AL, Slaughter BD, Unruh JR, Gerton JL.

Mol Biol Cell. 2014 Feb;25(3):337-46. doi: 10.1091/mbc.E13-07-0377. Epub 2013 Dec 4.


Independence of symmetry breaking on Bem1-mediated autocatalytic activation of Cdc42.

Smith SE, Rubinstein B, Mendes Pinto I, Slaughter BD, Unruh JR, Li R.

J Cell Biol. 2013 Sep 30;202(7):1091-106. doi: 10.1083/jcb.201304180. Epub 2013 Sep 23.


Probabilistic determination of probe locations from distance data.

Xu XP, Slaughter BD, Volkmann N.

J Struct Biol. 2013 Oct;184(1):75-82. doi: 10.1016/j.jsb.2013.05.020. Epub 2013 Jun 13.


Binding of Drosophila Polo kinase to its regulator Matrimony is noncanonical and involves two separate functional domains.

Bonner AM, Hughes SE, Chisholm JA, Smith SK, Slaughter BD, Unruh JR, Collins KA, Friederichs JM, Florens L, Swanson SK, Pelot MC, Miller DE, Washburn MP, Jaspersen SL, Hawley RS.

Proc Natl Acad Sci U S A. 2013 Mar 26;110(13):E1222-31. doi: 10.1073/pnas.1301690110. Epub 2013 Mar 11.


Sequential actin-based pushing forces drive meiosis I chromosome migration and symmetry breaking in oocytes.

Yi K, Rubinstein B, Unruh JR, Guo F, Slaughter BD, Li R.

J Cell Biol. 2013 Mar 4;200(5):567-76. doi: 10.1083/jcb.201211068. Epub 2013 Feb 25.


Quality control: putting protein aggregates in a bind.

Unruh JR, Slaughter BD, Li R.

Curr Biol. 2013 Jan 21;23(2):R74-6. doi: 10.1016/j.cub.2012.12.005.


Non-uniform membrane diffusion enables steady-state cell polarization via vesicular trafficking.

Slaughter BD, Unruh JR, Das A, Smith SE, Rubinstein B, Li R.

Nat Commun. 2013;4:1380. doi: 10.1038/ncomms2370.


Genetic analysis of Mps3 SUN domain mutants in Saccharomyces cerevisiae reveals an interaction with the SUN-like protein Slp1.

Friederichs JM, Gardner JM, Smoyer CJ, Whetstine CR, Gogol M, Slaughter BD, Jaspersen SL.

G3 (Bethesda). 2012 Dec;2(12):1703-18. doi: 10.1534/g3.112.004614. Epub 2012 Dec 1.


Weakly nonlinear analysis of symmetry breaking in cell polarity models.

Rubinstein B, Slaughter BD, Li R.

Phys Biol. 2012 Aug;9(4):045006. doi: 10.1088/1478-3975/9/4/045006. Epub 2012 Aug 7.


Cell-cycle-coupled structural oscillation of centromeric nucleosomes in yeast.

Shivaraju M, Unruh JR, Slaughter BD, Mattingly M, Berman J, Gerton JL.

Cell. 2012 Jul 20;150(2):304-16. doi: 10.1016/j.cell.2012.05.034.


Cohesin proteins promote ribosomal RNA production and protein translation in yeast and human cells.

Bose T, Lee KK, Lu S, Xu B, Harris B, Slaughter B, Unruh J, Garrett A, McDowell W, Box A, Li H, Peak A, Ramachandran S, Seidel C, Gerton JL.

PLoS Genet. 2012;8(6):e1002749. doi: 10.1371/journal.pgen.1002749. Epub 2012 Jun 14.


Acetylation of the SUN protein Mps3 by Eco1 regulates its function in nuclear organization.

Ghosh S, Gardner JM, Smoyer CJ, Friederichs JM, Unruh JR, Slaughter BD, Alexander R, Chisholm RD, Lee KK, Workman JL, Jaspersen SL.

Mol Biol Cell. 2012 Jul;23(13):2546-59. doi: 10.1091/mbc.E11-07-0600. Epub 2012 May 16.


Flippase-mediated phospholipid asymmetry promotes fast Cdc42 recycling in dynamic maintenance of cell polarity.

Das A, Slaughter BD, Unruh JR, Bradford WD, Alexander R, Rubinstein B, Li R.

Nat Cell Biol. 2012 Feb 19;14(3):304-10. doi: 10.1038/ncb2444.


Critical role of amyloid-like oligomers of Drosophila Orb2 in the persistence of memory.

Majumdar A, Cesario WC, White-Grindley E, Jiang H, Ren F, Khan MR, Li L, Choi EM, Kannan K, Guo F, Unruh J, Slaughter B, Si K.

Cell. 2012 Feb 3;148(3):515-29. doi: 10.1016/j.cell.2012.01.004. Epub 2012 Jan 26.


The SUN protein Mps3 is required for spindle pole body insertion into the nuclear membrane and nuclear envelope homeostasis.

Friederichs JM, Ghosh S, Smoyer CJ, McCroskey S, Miller BD, Weaver KJ, Delventhal KM, Unruh J, Slaughter BD, Jaspersen SL.

PLoS Genet. 2011 Nov;7(11):e1002365. doi: 10.1371/journal.pgen.1002365. Epub 2011 Nov 17.


Motility and segregation of Hsp104-associated protein aggregates in budding yeast.

Zhou C, Slaughter BD, Unruh JR, Eldakak A, Rubinstein B, Li R.

Cell. 2011 Nov 23;147(5):1186-96. doi: 10.1016/j.cell.2011.11.002.


Three-dimensional reconstructions of Arp2/3 complex with bound nucleation promoting factors.

Xu XP, Rouiller I, Slaughter BD, Egile C, Kim E, Unruh JR, Fan X, Pollard TD, Li R, Hanein D, Volkmann N.

EMBO J. 2012 Jan 4;31(1):236-47. doi: 10.1038/emboj.2011.343. Epub 2011 Sep 20.

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