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Items: 1 to 50 of 210

1.

Complete Genome Sequences of Two Klebsiella pneumoniae Phages Isolated as Part of an International Effort.

Yerushalmy O, Coppenhagen-Glazer S, Nir-Paz R, Tuomala H, Skurnik M, Kiljunen S, Hazan R.

Microbiol Resour Announc. 2019 Sep 19;8(38). pii: e00843-19. doi: 10.1128/MRA.00843-19.

2.

The Removal of Endo- and Enterotoxins From Bacteriophage Preparations.

Hietala V, Horsma-Heikkinen J, Carron A, Skurnik M, Kiljunen S.

Front Microbiol. 2019 Jul 23;10:1674. doi: 10.3389/fmicb.2019.01674. eCollection 2019.

3.

Role of DEAD-box RNA helicase genes in the growth of Yersinia pseudotuberculosis IP32953 under cold, pH, osmotic, ethanol and oxidative stresses.

Jiang X, Keto-Timonen R, Skurnik M, Korkeala H.

PLoS One. 2019 Jul 9;14(7):e0219422. doi: 10.1371/journal.pone.0219422. eCollection 2019.

4.

Characterization of vB_ApiM_fHyAci03, a novel lytic bacteriophage that infects clinical Acinetobacter strains.

Pulkkinen E, Wicklund A, Oduor JMO, Skurnik M, Kiljunen S.

Arch Virol. 2019 Aug;164(8):2197-2199. doi: 10.1007/s00705-019-04284-z. Epub 2019 May 23.

5.

Genomic characterization of four novel Staphylococcus myoviruses.

Oduor JMO, Kiljunen S, Kadija E, Mureithi MW, Nyachieo A, Skurnik M.

Arch Virol. 2019 Aug;164(8):2171-2173. doi: 10.1007/s00705-019-04267-0. Epub 2019 May 15.

PMID:
31093759
6.

Salmonella enterica Serovar Typhimurium Interacts with CD209 Receptors To Promote Host Dissemination and Infection.

Ye C, Li Q, Li X, Park CG, He Y, Zhang Y, Wu B, Xue Y, Yang K, Lv Y, Ying XL, Ding HH, Cai H, Alkraiem AA, Njiri O, Tembo J, Huang HP, Li AY, Gong J, Qin J, Cheng B, Wei X, Sun Z, Zhang SS, Zhang P, Zheng GX, Li W, Kan B, Yan M, Xiding X, Huo X, Zeng Y, Peng H, Fu Y, Klena JD, Skurnik M, Jiang LY, Chen T.

Infect Immun. 2019 Jul 23;87(8). pii: e00100-19. doi: 10.1128/IAI.00100-19. Print 2019 Aug.

PMID:
31085704
7.

Yersinia pestis Interacts With SIGNR1 (CD209b) for Promoting Host Dissemination and Infection.

Yang K, He Y, Park CG, Kang YS, Zhang P, Han Y, Cui Y, Bulgheresi S, Anisimov AP, Dentovskaya SV, Ying X, Jiang L, Ding H, Njiri OA, Zhang S, Zheng G, Xia L, Kan B, Wang X, Jing H, Yan M, Li W, Wang Y, Xiamu X, Chen G, Ma D, Bartra SS, Plano GV, Klena JD, Yang R, Skurnik M, Chen T.

Front Immunol. 2019 Mar 12;10:96. doi: 10.3389/fimmu.2019.00096. eCollection 2019.

8.

Deciphering the Antibacterial Mode of Action of Alpha-Mangostin on Staphylococcus epidermidis RP62A Through an Integrated Transcriptomic and Proteomic Approach.

Sivaranjani M, Leskinen K, Aravindraja C, Saavalainen P, Pandian SK, Skurnik M, Ravi AV.

Front Microbiol. 2019 Feb 6;10:150. doi: 10.3389/fmicb.2019.00150. eCollection 2019.

9.

Yersinia pseudotuberculosis Exploits CD209 Receptors for Promoting Host Dissemination and Infection.

He YX, Ye CL, Zhang P, Li Q, Park CG, Yang K, Jiang LY, Lv Y, Ying XL, Ding HH, Huang HP, Mambwe Tembo J, Li AY, Cheng B, Zhang SS, Zheng GX, Chen SY, Li W, Xia LX, Kan B, Wang X, Jing HQ, Yang RF, Peng H, Fu YX, Klena JD, Skurnik M, Chen T.

Infect Immun. 2018 Dec 19;87(1). pii: e00654-18. doi: 10.1128/IAI.00654-18. Print 2019 Jan.

10.
11.

Complete Genome Sequences of Two Escherichia Phages Isolated from Wastewater in Finland.

Kiljunen S, Wicklund A, Skurnik M.

Genome Announc. 2018 May 31;6(22). pii: e00401-18. doi: 10.1128/genomeA.00401-18.

12.

Genomic Characterization of Sixteen Yersinia enterocolitica-Infecting Podoviruses of Pig Origin.

Salem M, Skurnik M.

Viruses. 2018 Apr 3;10(4). pii: E174. doi: 10.3390/v10040174.

13.

Bacteriophages reduce Yersinia enterocolitica contamination of food and kitchenware.

Jun JW, Park SC, Wicklund A, Skurnik M.

Int J Food Microbiol. 2018 Apr 20;271:33-47. doi: 10.1016/j.ijfoodmicro.2018.02.007. Epub 2018 Feb 7.

PMID:
29477807
14.

Phylogeographic separation and formation of sexually discrete lineages in a global population of Yersinia pseudotuberculosis.

Seecharran T, Kalin-Manttari L, Koskela K, Nikkari S, Dickins B, Corander J, Skurnik M, McNally A.

Microb Genom. 2017 Sep 18;3(10):e000133. doi: 10.1099/mgen.0.000133. eCollection 2017 Oct.

15.

Characterization of vB_SauM-fRuSau02, a Twort-Like Bacteriophage Isolated from a Therapeutic Phage Cocktail.

Leskinen K, Tuomala H, Wicklund A, Horsma-Heikkinen J, Kuusela P, Skurnik M, Kiljunen S.

Viruses. 2017 Sep 14;9(9). pii: E258. doi: 10.3390/v9090258.

16.

Stand-Alone EAL Domain Proteins Form a Distinct Subclass of EAL Proteins Involved in Regulation of Cell Motility and Biofilm Formation in Enterobacteria.

El Mouali Y, Kim H, Ahmad I, Brauner A, Liu Y, Skurnik M, Galperin MY, Römling U.

J Bacteriol. 2017 Aug 22;199(18). pii: e00179-17. doi: 10.1128/JB.00179-17. Print 2017 Sep 15.

17.

Endogenous hepcidin and its agonist mediate resistance to selected infections by clearing non-transferrin-bound iron.

Stefanova D, Raychev A, Arezes J, Ruchala P, Gabayan V, Skurnik M, Dillon BJ, Horwitz MA, Ganz T, Bulut Y, Nemeth E.

Blood. 2017 Jul 20;130(3):245-257. doi: 10.1182/blood-2017-03-772715. Epub 2017 May 2.

18.

Lectin pathway factors in patients suffering from juvenile idiopathic arthritis.

Kasperkiewicz K, Eppa Ł, Świerzko AS, Bartłomiejczyk MA, Żuber ZM, Siniewicz-Luzeńczyk K, Mężyk E, Matsushita M, Bąk-Romaniszyn L, Zeman K, Skurnik M, Cedzyński M.

Immunol Cell Biol. 2017 Sep;95(8):666-675. doi: 10.1038/icb.2017.31. Epub 2017 Apr 13.

PMID:
28405017
19.

Screening of the two-component-system histidine kinases of Listeria monocytogenes EGD-e. LiaS is needed for growth under heat, acid, alkali, osmotic, ethanol and oxidative stresses.

Pöntinen A, Lindström M, Skurnik M, Korkeala H.

Food Microbiol. 2017 Aug;65:36-43. doi: 10.1016/j.fm.2017.01.018. Epub 2017 Jan 31.

PMID:
28400017
20.

Pili-like proteins of Akkermansia muciniphila modulate host immune responses and gut barrier function.

Ottman N, Reunanen J, Meijerink M, Pietilä TE, Kainulainen V, Klievink J, Huuskonen L, Aalvink S, Skurnik M, Boeren S, Satokari R, Mercenier A, Palva A, Smidt H, de Vos WM, Belzer C.

PLoS One. 2017 Mar 1;12(3):e0173004. doi: 10.1371/journal.pone.0173004. eCollection 2017.

21.

LuxCDE-luxAB-based promoter reporter system to monitor the Yersinia enterocolitica O:3 gene expression in vivo.

Bozcal E, Dagdeviren M, Uzel A, Skurnik M.

PLoS One. 2017 Feb 24;12(2):e0172877. doi: 10.1371/journal.pone.0172877. eCollection 2017.

22.

Identifying components required for OMP biogenesis as novel targets for antiinfective drugs.

Weirich J, Bräutigam C, Mühlenkamp M, Franz-Wachtel M, Macek B, Meuskens I, Skurnik M, Leskinen K, Bohn E, Autenrieth I, Schütz M.

Virulence. 2017 Oct 3;8(7):1170-1188. doi: 10.1080/21505594.2016.1278333. Epub 2017 Jan 24.

23.

Several Hfq-dependent alterations in physiology of Yersinia enterocolitica O:3 are mediated by derepression of the transcriptional regulator RovM.

Leskinen K, Pajunen MI, Varjosalo M, Fernández-Carrasco H, Bengoechea JA, Skurnik M.

Mol Microbiol. 2017 Mar;103(6):1065-1091. doi: 10.1111/mmi.13610. Epub 2017 Jan 23.

24.

A minireview on the in vitro and in vivo experiments with anti-Escherichia coli O157:H7 phages as potential biocontrol and phage therapy agents.

Sabouri S, Sepehrizadeh Z, Amirpour-Rostami S, Skurnik M.

Int J Food Microbiol. 2017 Feb 21;243:52-57. doi: 10.1016/j.ijfoodmicro.2016.12.004. Epub 2016 Dec 11. Review.

PMID:
27978506
25.

Bacteriophages of Yersinia pestis.

Zhao X, Skurnik M.

Adv Exp Med Biol. 2016;918:361-375. Review.

PMID:
27722870
26.

Yersinia enterocolitica-Specific Infection by Bacteriophages TG1 and ϕR1-RT Is Dependent on Temperature-Regulated Expression of the Phage Host Receptor OmpF.

Leon-Velarde CG, Happonen L, Pajunen M, Leskinen K, Kropinski AM, Mattinen L, Rajtor M, Zur J, Smith D, Chen S, Nawaz A, Johnson RP, Odumeru JA, Griffiths MW, Skurnik M.

Appl Environ Microbiol. 2016 Aug 15;82(17):5340-53. doi: 10.1128/AEM.01594-16. Print 2016 Sep 1.

27.

[Possibilities of bacteriophage therapy].

Skurnik M, Kiljunen S.

Duodecim. 2016;132(8):712-9. Finnish.

PMID:
27244930
28.

RNA-Sequencing Reveals the Progression of Phage-Host Interactions between φR1-37 and Yersinia enterocolitica.

Leskinen K, Blasdel BG, Lavigne R, Skurnik M.

Viruses. 2016 Apr 22;8(4):111. doi: 10.3390/v8040111.

29.

Yersinia adhesins: An arsenal for infection.

Chauhan N, Wrobel A, Skurnik M, Leo JC.

Proteomics Clin Appl. 2016 Oct;10(9-10):949-963. doi: 10.1002/prca.201600012. Epub 2016 May 17. Review.

PMID:
27068449
30.

Serotype O:8 isolates in the Yersinia pseudotuberculosis complex have different O-antigen gene clusters and produce various forms of rough LPS.

Kenyon JJ, Duda KA, De Felice A, Cunneen MM, Molinaro A, Laitinen J, Skurnik M, Holst O, Reeves PR, De Castro C.

Innate Immun. 2016 Apr;22(3):205-17. doi: 10.1177/1753425916631403. Epub 2016 Feb 11.

PMID:
26873504
31.

[THE EFFECT OF waaL LIGASE GENES DELETION ON MOTILITY AND STRESS ADAPTATION REACTIONS OF YERSINIA ENTEROCOLITICA 6471/76].

Shevchenko JI, Shilina JV, Pozur VK, Skurnik M.

Tsitol Genet. 2015 Nov-Dec;49(6):13-20. Russian.

PMID:
26841489
32.

Primary Amine Oxidase of Escherichia coli Is a Metabolic Enzyme that Can Use a Human Leukocyte Molecule as a Substrate.

Elovaara H, Huusko T, Maksimow M, Elima K, Yegutkin GG, Skurnik M, Dobrindt U, Siitonen A, McPherson MJ, Salmi M, Jalkanen S.

PLoS One. 2015 Nov 10;10(11):e0142367. doi: 10.1371/journal.pone.0142367. eCollection 2015.

33.

Interaction of human mannose-binding lectin (MBL) with Yersinia enterocolitica lipopolysaccharide.

Kasperkiewicz K, Swierzko AS, Bartlomiejczyk MA, Cedzynski M, Noszczynska M, Duda KA, Michalski M, Skurnik M.

Int J Med Microbiol. 2015 Sep;305(6):544-52. doi: 10.1016/j.ijmm.2015.07.001. Epub 2015 Jul 8.

PMID:
26188838
34.

Isolation of pathogenic Yersinia enterocolitica strains from different sources in Izmir region, Turkey.

Bozcal E, Uzel A, Aydemir S, Skurnik M.

Folia Microbiol (Praha). 2015 Nov;60(6):523-9. doi: 10.1007/s12223-015-0394-y. Epub 2015 Apr 26.

PMID:
25912845
35.

Host Langerin (CD207) is a receptor for Yersinia pestis phagocytosis and promotes dissemination.

Yang K, Park CG, Cheong C, Bulgheresi S, Zhang S, Zhang P, He Y, Jiang L, Huang H, Ding H, Wu Y, Wang S, Zhang L, Li A, Xia L, Bartra SS, Plano GV, Skurnik M, Klena JD, Chen T.

Immunol Cell Biol. 2015 Oct;93(9):815-24. doi: 10.1038/icb.2015.46. Epub 2015 Apr 1.

36.

Expression of the Yersinia enterocolitica O:3 LPS O-antigen and outer core gene clusters is RfaH-dependent.

Leskinen K, Varjosalo M, Li Z, Li CM, Skurnik M.

Microbiology. 2015 Jun;161(6):1282-94. doi: 10.1099/mic.0.000076. Epub 2015 Jun 23.

PMID:
25767108
37.

Generation of a CRISPR database for Yersinia pseudotuberculosis complex and role of CRISPR-based immunity in conjugation.

Koskela KA, Mattinen L, Kalin-Mänttäri L, Vergnaud G, Gorgé O, Nikkari S, Skurnik M.

Environ Microbiol. 2015 Nov;17(11):4306-21. doi: 10.1111/1462-2920.12816. Epub 2015 Mar 27.

38.

Human Microbiome: When a Friend Becomes an Enemy.

Muszer M, Noszczyńska M, Kasperkiewicz K, Skurnik M.

Arch Immunol Ther Exp (Warsz). 2015 Aug;63(4):287-98. doi: 10.1007/s00005-015-0332-3. Epub 2015 Feb 15. Review.

39.

Quality and safety requirements for sustainable phage therapy products.

Pirnay JP, Blasdel BG, Bretaudeau L, Buckling A, Chanishvili N, Clark JR, Corte-Real S, Debarbieux L, Dublanchet A, De Vos D, Gabard J, Garcia M, Goderdzishvili M, Górski A, Hardcastle J, Huys I, Kutter E, Lavigne R, Merabishvili M, Olchawa E, Parikka KJ, Patey O, Pouilot F, Resch G, Rohde C, Scheres J, Skurnik M, Vaneechoutte M, Van Parys L, Verbeken G, Zizi M, Van den Eede G.

Pharm Res. 2015 Jul;32(7):2173-9. doi: 10.1007/s11095-014-1617-7. Epub 2015 Jan 14.

40.

Isolation and characterization of Yersinia-specific bacteriophages from pig stools in Finland.

Salem M, Virtanen S, Korkeala H, Skurnik M.

J Appl Microbiol. 2015 Mar;118(3):599-608. doi: 10.1111/jam.12722. Epub 2015 Jan 9.

41.

Absence of YbeY RNase compromises the growth and enhances the virulence plasmid gene expression of Yersinia enterocolitica O:3.

Leskinen K, Varjosalo M, Skurnik M.

Microbiology. 2015 Feb;161(Pt 2):285-99. doi: 10.1099/mic.0.083097-0. Epub 2014 Nov 21.

PMID:
25416689
42.

Serological characterization of the enterobacterial common antigen substitution of the lipopolysaccharide of Yersinia enterocolitica O : 3.

Noszczyńska M, Kasperkiewicz K, Duda KA, Podhorodecka J, Rabsztyn K, Gwizdała K, Świerzko AS, Radziejewska-Lebrecht J, Holst O, Skurnik M.

Microbiology. 2015 Jan;161(Pt 1):219-27. doi: 10.1099/mic.0.083493-0. Epub 2014 Nov 18.

PMID:
25406452
43.
44.

Yersinia pestis Ail recruitment of C4b-binding protein leads to factor I-mediated inactivation of covalently and noncovalently bound C4b.

Ho DK, Skurnik M, Blom AM, Meri S.

Eur J Immunol. 2014 Mar;44(3):742-51. doi: 10.1002/eji.201343552. Epub 2014 Jan 13.

45.

Parallel independent evolution of pathogenicity within the genus Yersinia.

Reuter S, Connor TR, Barquist L, Walker D, Feltwell T, Harris SR, Fookes M, Hall ME, Petty NK, Fuchs TM, Corander J, Dufour M, Ringwood T, Savin C, Bouchier C, Martin L, Miettinen M, Shubin M, Riehm JM, Laukkanen-Ninios R, Sihvonen LM, Siitonen A, Skurnik M, Falcão JP, Fukushima H, Scholz HC, Prentice MB, Wren BW, Parkhill J, Carniel E, Achtman M, McNally A, Thomson NR.

Proc Natl Acad Sci U S A. 2014 May 6;111(18):6768-73. doi: 10.1073/pnas.1317161111. Epub 2014 Apr 21.

46.

Structure and genetic basis of Yersinia similis serotype O:9 O-specific polysaccharide.

Beczała A, Ovchinnikova OG, Datta N, Mattinen L, Knapska K, Radziejewska-Lebrecht J, Holst O, Skurnik M.

Innate Immun. 2015 Jan;21(1):3-16. doi: 10.1177/1753425913514783. Epub 2013 Dec 20.

PMID:
24361587
47.

Enterobacterial common antigen and O-specific polysaccharide coexist in the lipopolysaccharide of Yersinia enterocolitica serotype O:3.

Muszyński A, Rabsztyn K, Knapska K, Duda KA, Duda-Grychtoł K, Kasperkiewicz K, Radziejewska-Lebrecht J, Holst O, Skurnik M.

Microbiology. 2013 Aug;159(Pt 8):1782-93. doi: 10.1099/mic.0.066662-0. Epub 2013 Jun 19.

PMID:
23782803
48.

Isolation, characterization and complete genome sequence of PhaxI: a phage of Escherichia coli O157 : H7.

Shahrbabak SS, Khodabandehlou Z, Shahverdi AR, Skurnik M, Ackermann HW, Varjosalo M, Yazdi MT, Sepehrizadeh Z.

Microbiology. 2013 Aug;159(Pt 8):1629-38. doi: 10.1099/mic.0.063776-0. Epub 2013 May 15.

PMID:
23676434
49.

Sequencing of virulence genes shows limited genetic variability in Yersinia pseudotuberculosis.

Palonen E, Kangas S, Somervuo P, Lindström M, Fredriksson-Ahomaa M, Skurnik M, Korkeala H.

Foodborne Pathog Dis. 2013 Jan;10(1):21-7. doi: 10.1089/fpd.2012.1247. Epub 2012 Nov 15.

PMID:
23153288
50.

The O-specific polysaccharide structure and gene cluster of serotype O:12 of the Yersinia pseudotuberculosis complex, and the identification of a novel L-quinovose biosynthesis gene.

De Castro C, Kenyon JJ, Cunneen MM, Molinaro A, Holst O, Skurnik M, Reeves PR.

Glycobiology. 2013 Mar;23(3):346-53. doi: 10.1093/glycob/cws145. Epub 2012 Oct 16.

PMID:
23077132

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